We propose a novel reversible jump Markov chain Monte Carlo (MCMC) simulated annealing algorithm to optimize radial basis function (RBF) networks. This algorithm enables us to maximize the joint posterior distribution of the network parameters and the number of basis functions. It performs a global search in the joint …
arXiv research
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Enhances RJMCMC efficiency with non-linear transport-based proposals.
Generates random persistence diagrams for data analysis.
A new two-step MH method for Bayesian EL computation.
Unified framework for efficient trans-dimensional Bayesian inference using VI and NFs.
In this article we select the unknown dimension of the feature by re- versible jump MCMC inside a simulated annealing in bayesian set up of collaborative filter. We implement the same in MovieLens small dataset. We also tune the hyper parameter by using a modified empirical bayes. It can also be used to guess an initia…
New PDMP samplers tackle variable selection in models.
In this paper we build on previous work which uses inferences techniques, in particular Markov Chain Monte Carlo (MCMC) methods, to solve parameterized control problems. We propose a number of modifications in order to make this approach more practical in general, higher-dimensional spaces. We first introduce a new tar…
Online distributional prediction with latent cluster geometry
In recent years a number of methods have been developed for automatically learning the (sparse) connectivity structure of Markov Random Fields. These methods are mostly based on L1-regularized optimization which has a number of disadvantages such as the inability to assess model uncertainty and expensive crossvalidatio…
In recent years a number of methods have been developed for automatically learning the (sparse) connectivity structure of Markov Random Fields. These methods are mostly based on L1-regularized optimization which has a number of disadvantages such as the inability to assess model uncertainty and expensive cross-validati…
Adaptive Bayesian model for covariate-dependent power spectra analysis.
Bayesian method selects interacting regions in Markov models.
Bayesian method learns graph structures from Gaussian data efficiently.
In many applications, such as economics, operations research and reinforcement learning, one often needs to estimate a multivariate regression function f subject to a convexity constraint. For example, in sequential decision processes the value of a state under optimal subsequent decisions may be known to be convex or …
A standard technique for understanding underlying dependency structures among a set of variables posits a shared conditional probability distribution for the variables measured on individuals within a group. This approach is often referred to as module networks, where individuals are represented by nodes in a network, …
BINDy uses Bayesian methods to identify nonlinear dynamics from data.
Bayesian symbolic regression uncovers missing physics from data with uncertainty quantification.
Develops a method to model multivariate count processes with Cox processes and shot noise intensities.
Unified framework for MCMC algorithms simplifies their design and application.
The rapid development of computing power and efficient Markov Chain Monte Carlo (MCMC) simulation algorithms have revolutionized Bayesian statistics, making it a highly practical inference method in applied work. However, MCMC algorithms tend to be computationally demanding, and are particularly slow for large datasets…
Unified framework for MCMC and machine learning problems.
JaxSGMC simplifies SG-MCMC for Bayesian deep learning.
Paper proposes first unlearning algorithm for MCMC models.
Stochastic EM with biased MCMC improves inference stability.
It is known that the Langevin dynamics used in MCMC is the gradient flow of the KL divergence on the Wasserstein space, which helps convergence analysis and inspires recent particle-based variational inference methods (ParVIs). But no more MCMC dynamics is understood in this way. In this work, by developing novel conce…
Monte Carlo (MC) methods are widely used for Bayesian inference and optimization in statistics, signal processing and machine learning. A well-known class of MC methods are Markov Chain Monte Carlo (MCMC) algorithms. In order to foster better exploration of the state space, specially in high-dimensional applications, s…
Cyclical MCMC tackles high-dimensional multimodal distributions, showing convergence under certain conditions.
Paper compares MCMC-based copula methods for exchange option pricing.
This paper studies a curious phenomenon in learning energy-based model (EBM) using MCMC. In each learning iteration, we generate synthesized examples by running a non-convergent, non-mixing, and non-persistent short-run MCMC toward the current model, always starting from the same initial distribution such as uniform no…
Nonlinear MCMC improves Bayesian machine learning sampling.
Statistical inference methods are fundamentally important in machine learning. Most state-of-the-art inference algorithms are variants of Markov chain Monte Carlo (MCMC) or variational inference (VI). However, both methods struggle with limitations in practice: MCMC methods can be computationally demanding; VI methods …
Particle MCMC involves using a particle filter within an MCMC algorithm. For inference of a model which involves an unobserved stochastic process, the standard implementation uses the particle filter to propose new values for the stochastic process, and MCMC moves to propose new values for the parameters. We show how p…
Stochastic gradient MCMC (SG-MCMC) algorithms have proven useful in scaling Bayesian inference to large datasets under an assumption of i.i.d data. We instead develop an SG-MCMC algorithm to learn the parameters of hidden Markov models (HMMs) for time-dependent data. There are two challenges to applying SG-MCMC in this…
New analysis of SGD with MCMC gradient estimator shows convergence rate and saddle point escape.
Proposes MIVI for efficient posterior estimation and design of MCMC transitions.
This study evaluates different normalizing flow architectures for MCMC.
AutoStep MCMC adapts step size locally for better sampling efficiency.
Markov chain Monte Carlo (MCMC) is a popular and successful general-purpose tool for Bayesian inference. However, MCMC cannot be practically applied to large data sets because of the prohibitive cost of evaluating every likelihood term at every iteration. Here we present Firefly Monte Carlo (FlyMC) an auxiliary variabl…
Stochastic gradient MCMC (SG-MCMC) has played an important role in large-scale Bayesian learning, with well-developed theoretical convergence properties. In such applications of SG-MCMC, it is becoming increasingly popular to employ distributed systems, where stochastic gradients are computed based on some outdated par…
We present a non-parametric Bayesian approach to structure learning with hidden causes. Previous Bayesian treatments of this problem define a prior over the number of hidden causes and use algorithms such as reversible jump Markov chain Monte Carlo to move between solutions. In contrast, we assume that the number of hi…
The book covers scalable MCMC methods for Bayesian learning.
We propose Subsampling MCMC, a Markov Chain Monte Carlo (MCMC) framework where the likelihood function for observations is estimated from a random subset of observations. We introduce a highly efficient unbiased estimator of the log-likelihood based on control variates, such that the computing cost is much smal…
Study improves Bayesian calibration of mechanical properties using active learning and MCMC.
The modern scale of data has brought new challenges to Bayesian inference. In particular, conventional MCMC algorithms are computationally very expensive for large data sets. A promising approach to solve this problem is embarrassingly parallel MCMC (EP-MCMC), which first partitions the data into multiple subsets and r…
New method reduces computational cost for Bayesian inference.
Sampling from posterior distributions using Markov chain Monte Carlo (MCMC) methods can require an exhaustive number of iterations, particularly when the posterior is multi-modal as the MCMC sampler can become trapped in a local mode for a large number of iterations. In this paper, we introduce the pseudo-extended MCMC…
Bayesian neural networks tutorial via MCMC in Python.