Optimizes control interventions in real-world networks using deep-learning and network science.
problem Optimizing control over socioeconomic networks subject to constraints.
method Integrates optimization tools from deep-learning with network science.
result Characterizes vulnerability of corporate networks to takeovers.
Artificial intelligence has been applied in wildfire science and management since the 1990s, with early applications including neural networks and expert systems. Since then the field has rapidly progressed congruently with the wide adoption of machine learning (ML) in the environmental sciences. Here, we present a sco…
New method calculates discrete curvature using effective resistances.
problem Calculating discrete curvature on graphs.
method Effective resistances to calculate curvature on graph nodes and links.
result Relation to established discrete curvatures and convergence to continuous curvature.
In this paper, we present a new approach to interpret deep learning models. By coupling mutual information with network science, we explore how information flows through feedforward networks. We show that efficiently approximating mutual information allows us to create an information measure that quantifies how much in…
A framework for network embedding using VDS principles.
problem Challenges in systematically studying network embedding algorithms.
method Veridical Data Science (VDS) framework applied to network embedding.
result Potential for new research directions in network embedding.
The paper proposes using network science to improve portfolio optimization by reducing noise in covariance estimation.
problem Noise in covariance estimation leads to suboptimal portfolio performance.
method The paper introduces SR-IFN, a network-based method to filter out noise from empirical covariance, enhancing portfolio optimization.
result The SR-IFN network improves portfolio performance by selecting peripheral, diversified assets and inversely weighting them based on centrality.
The paper uses a graph autoencoder to learn unbiased plant-pollinator interaction embeddings.
problem Sampling bias in citizen science data affects ecological network analysis.
method Bipartite graph variational autoencoder with HSIC for fairness.
result The method mitigates sampling bias and provides unbiased embeddings.
New research shows graph embeddings fail to capture key network properties.
problem Graph embeddings fail to capture salient properties of complex networks.
method Mathematical proof and empirical study of various embedding techniques.
result Any successful graph embedding must have a rank nearly linear in the number of vertices.
Wiki-CS dataset benchmarks Graph Neural Networks using Wikipedia articles.
problem Benchmarking Graph Neural Networks on a new domain with structural differences.
method Derived from Wikipedia, nodes represent Computer Science articles, edges from hyperlinks, 10 classes for different branches, evaluated semi-supervised node classification and link prediction.
result Graph Neural Networks perform well on Wiki-CS, showing structural differences from earlier benchmarks.
Real-world networks usually have community structure, that is, nodes are grouped into densely connected communities. Community detection is one of the most popular and best-studied research topics in network science and has attracted attention in many different fields, including computer science, statistics, social sci…
Lecture note for data science students on machine learning basics and advanced topics.
problem No specific problem stated; preparing students for advanced machine learning.
method Introduction of basic machine learning concepts and advanced topics.
result Students are prepared to study advanced machine learning topics.
Study optimizes CANN for actuarial tasks using RSM.
problem Optimizing hyperparameters for neural networks in actuarial science.
method Factorial design and response surface methodology (RSM).
result Reduced hyperparameter optimization from 288 to 188, achieving near-optimal performance.
New MCMC methods improve efficiency for large network inference.
problem Efficiency of Metropolis within Gibbs for large networks.
method Combination of split Hamiltonian Monte Carlo and Firefly Monte Carlo.
result New methods outperform Metropolis within Gibbs on synthetic and real networks.
Develops a method to estimate network difference in high-dimensional time series data.
problem Estimating network differences in high-dimensional data can be unreliable.
method Uses an L1 penalty on the difference of inverse spectral densities to estimate network differences.
result Establishes consistency of the method for sparse network differences.
NeuroMatch efficiently matches subgraphs in large graphs using neural networks.
problem Determining the presence and location of a query graph in a large target graph.
method NeuroMatch decomposes graphs into subgraphs, embeds them using graph neural networks, and matches them directly in the embedding space.
result NeuroMatch is 100x faster and 18% more accurate than existing methods.
Recent experimental advances in neuroscience have opened new vistas into the immense complexity of neuronal networks. This proliferation of data challenges us on two parallel fronts. First, how can we form adequate theoretical frameworks for understanding how dynamical network processes cooperate across widely disparat…
Citizen science projects are successful at gathering rich datasets for various applications. However, the data collected by citizen scientists are often biased --- in particular, aligned more with the citizens' preferences than with scientific objectives. We propose the Shift Compensation Network (SCN), an end-to-end l…
This survey clarifies dynamic network terminology and reviews GNN models for dynamic networks.
problem Ambiguity in dynamic network terminology and lack of GNN models for dynamic networks.
method Established consistent terminology and notation for dynamic networks, reviewed GNN models.
result Comprehensive survey of dynamic graph neural network models.
metabeta uses neural networks to speed up Bayesian mixed-effects regression.
problem Bayesian mixed-effects regression is computationally expensive.
method metabeta is a neural network model that pre-trains to estimate posterior distributions.
result metabeta achieves comparable performance to MCMC at a fraction of the time.
Proposes a graph neural network for traffic forecasting in WANs.
problem Traffic forecasting challenges in WANs due to dynamic and large data volumes.
method Dynamic diffusion convolutional recurrent neural networks for multistep traffic forecasting.
result Significant improvements in forecasting accuracy compared to classical methods.
SINN combines social science and deep learning for predicting opinion dynamics.
problem Predicting opinion dynamics in social networks using traditional models requires extensive calibration with real data.
method SINN integrates theoretical models and social media data using physics-informed neural networks (PINNs) and matrix factorization.
result SINN outperforms six baseline methods in predicting opinion dynamics on real-world and synthetic datasets.
We use methods from network science to analyze corruption risk in a large administrative dataset of over 4 million public procurement contracts from European Union member states covering the years 2008-2016. By mapping procurement markets as bipartite networks of issuers and winners of contracts we can visualize and de…
Parsimonious neural networks discover interpretable physical laws from data.
problem Discovering interpretable physical laws from data using machine learning.
method Combining neural networks with evolutionary optimization to balance accuracy and parsimony.
result Developed models for classical mechanics and materials melting temperature prediction.
Deep learning improves community detection in graph datasets.
problem Community detection in graph datasets using deep learning.
method Proposes a deep learning approach using Gumbel Softmax for clustering graph nodes.
result The new approach significantly outperforms traditional clustering methods.
Study quantifies events leading to Terra project failure in 2022.
problem Terra project's fragility and dependency on Anchor protocol.
method Systematic review of social media news, hourly and transaction data analysis, network science techniques.
result Identified trigger events and analyzed dependency structures using network science.
This thesis explores Ollivier-Ricci curvature in graphs and manifolds, with applications to graph neural networks.
problem Understanding curvature in metric spaces and graphs.
method Combines optimal transport theory, Riemannian manifolds, and graph theory to define and analyze Ollivier-Ricci curvature.
result Extensions of Ollivier-Ricci curvature to directed graphs and applications in network science.
Drawing on recent contributions inferring financial interconnectedness from market data, our paper provides new insights on the evolution of the US financial industry over a long period of time by using several tools coming from network science. Following [1] a Time-Varying Parameter Vector AutoRegressive (TVP-VAR) app…
Neural networks can be simplified to linear regression for easier understanding by statisticians.
problem Introducing neural networks to statisticians who are not familiar with them.
method Describing neural networks that approximate linear regression and discussing customizations.
result Statisticians can now understand neural networks by focusing on linear regression.
Data Science is currently a popular field of science attracting expertise from very diverse backgrounds. Current learning practices need to acknowledge this and adapt to it. This paper summarises some experiences relating to such learning approaches from teaching a postgraduate Data Science module, and draws some learn…
Model infers diffusion networks from heterogeneous cascade data.
problem Understanding and predicting diffusion processes in interconnected populations.
method Double mixture directed graph model with layer-specific constraints.
result Convex formulation allows for statistical and computational guarantees.
Wide neural networks can learn complex functions like gravitational force law.
problem Learning complex functions like gravitational force law with neural networks.
method Extending theoretical bounds to analytic functions on the sphere using SGD and ReLU networks.
result Wide ReLU networks can learn analytic functions efficiently with proportional number of samples.
Swarm intelligence is the collective behavior emerging in systems with locally interacting components. Because of their self-organization capabilities, swarm-based systems show essential properties for handling real-world problems such as robustness, scalability, and flexibility. Yet, we do not know why swarm-based alg…
ML methods improve planetary science data analysis.
problem Insufficient use of ML in planetary science.
method Ten recommendations for integrating ML in planetary science.
result Expanding planetary science insights from large datasets.
Deep learning excels in AI but struggles with causal physics.
problem Deep learning struggles with causal relationships in physical sciences.
method Combining Bayesian methods, physical constraints, and causal models.
result Deep learning can mislead in systems with unclear causal relationships.
This paper improves GNN efficiency for large-scale graph applications.
problem High memory usage and computational costs in large-scale graph applications.
method Sparsification techniques from Network Science and Machine Learning.
result Adaptive rewiring enhances GNN performance and scalability.
This guide explains statistical distances for evaluating generative models.
problem Evaluating the quality of samples from generative models.
method Four statistical distances: SW, C2ST, MMD, FID.
result Different distances can yield varying results on similar data.
Robot science discovers new materials faster.
problem Discovering advanced materials in complex synthesis landscapes.
method Closed-loop, active learning-driven autonomous system.
result Discovery of a novel epitaxial nanocomposite phase-change memory material.
Causal inference from observational data is the goal of many data analyses in the health and social sciences. However, academic statistics has often frowned upon data analyses with a causal objective. The introduction of the term "data science" provides a historic opportunity to redefine data analysis in such a way tha…
This work explores using deep NNs to learn quantum systems from probability distributions.
problem Learning quantum systems from limited probability distribution data.
method Using deep neural networks to reconstruct quantum Hamiltonian from probability distributions.
result Deep neural networks can learn quantum Hamiltonians from probability distributions.
ML4Chem is an open-source machine learning library for chemistry and materials science. It provides an extendable platform to develop and deploy machine learning models and pipelines and is targeted to the non-expert and expert users. ML4Chem follows user-experience design and offers the needed tools to go from data pr…
Today, the prominence of data science within organizations has given rise to teams of data science workers collaborating on extracting insights from data, as opposed to individual data scientists working alone. However, we still lack a deep understanding of how data science workers collaborate in practice. In this work…
Model for material elasticity and plasticity using networks.
problem Understanding the elasticity and plasticity of materials.
method Developed a mathematical model based on networks, defining tension tensor for periodic graphs.
result The model explains elasticity and plasticity through local moves on graphs.
Foundation models alter medical data science workflow, challenging veridical data science principles.
problem Foundation models disrupt traditional data science practices in medicine.
method Critically examined the medical foundation model lifecycle and its deviation from veridical data science principles.
result Foundation models challenge veridical data science principles of predictability, computability, and stability.
Chronnet models spatiotemporal data using chronological networks.
problem Handling large spatiotemporal datasets efficiently.
method Chronnet: Grid-based network model representing events chronologically.
result Chronnet captures frequent patterns, spatial changes, outliers, and clusters.
BayesFlow learns complex models using neural networks.
problem Estimating parameters in complex, non-likelihood models.
method Invertible neural networks for global Bayesian inference.
result Global probabilistic mapping from data to parameters.
Networks are ubiquitous in science and have become a focal point for discussion in everyday life. Formal statistical models for the analysis of network data have emerged as a major topic of interest in diverse areas of study, and most of these involve a form of graphical representation. Probability models on graphs dat…
Representation costs in data science: Unifying function-space views of parametric methods
problem Analyzing representation costs of parametric data-fitting methods
method Developing a general framework for analyzing representation costs through parameter-space regularizers
result Proving that many natural results hold in this abstract setting, including representer theorems for parametric methods on their native spaces
Upper bound on CRN reaction rates derived using information geometry.
problem Challenging task of deriving an upper bound on reaction rates of nonlinear, discrete CRNs.
method Information geometric approach using natural gradient.
result Validated through numerical simulations, demonstrating faster convergence in specific CRNs.