Motivated by the need to automate medical information extraction from free-text radiological reports, we present a bi-directional long short-term memory (BiLSTM) neural network architecture for modelling radiological language. The model has been used to address two NLP tasks: medical named-entity recognition (NER) and …
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48 results for “medical radiology”
Deep learning is a branch of artificial intelligence where networks of simple interconnected units are used to extract patterns from data in order to solve complex problems. Deep learning algorithms have shown groundbreaking performance in a variety of sophisticated tasks, especially those related to images. They have …
The paper introduces sanity tests to detect spurious correlations in AI-guided radiology systems.
problem Detecting when AI systems perform well on development data for the wrong reasons.
method Design and implementation of sanity tests to identify spurious correlations.
result Sanity tests can identify spurious correlations in AI-guided radiology systems.
Model uses unsupervised learning to classify medical reports with less labeled data.
problem Lack of labeled data for fine-grained disease classification in medical reports.
method Developed a pipeline combining an unsupervised encoder-language model and a supervised classifier model.
result Improved classification accuracy with less labeled data compared to previous methods.
Convolutional neural networks (CNNs) have been successfully employed in recent years for the detection of radiological abnormalities in medical images such as plain x-rays. To date, most studies use CNNs on individual examinations in isolation and discard previously available clinical information. In this study we set …
CheXpert++: Approximating the CheXpert labeler for Speed,Differentiability, and Probabilistic Outputcs.LG
CheXpert++ improves CheXpert's accuracy and usability for medical radiology reports.
problem Infeasibility of obtaining ground truth labels for medical data.
method BERT-based approximation of CheXpert, addressing speed, differentiability, and probabilistic output.
result Achieves 99.81% parity with CheXpert, significantly faster, differentiable, and probabilistic.
Predicting highrisk vascular diseases is a significant issue in the medical domain. Most predicting methods predict the prognosis of patients from pathological and radiological measurements, which are expensive and require much time to be analyzed. Here we propose deep attention models that predict the onset of the hig…
Neural networks promise to bring robust, quantitative analysis to medical fields, but adoption is limited by the technicalities of training these networks. To address this translation gap between medical researchers and neural networks in the field of pathology, we have created an intuitive interface which utilizes the…
Automated generation of medical reports from chest x-rays using expert annotations.
problem Generating long, unstructured text from medical images with context and consistency.
method First learn visually-informative medical concepts from raw reports, then use these concepts to auto-generate structured reports from images.
result Validation on OpenI dataset shows auto-generated reports are consistent with manual annotations.
Deep Learning with Permutation-invariant Operator for Multi-instance Histopathology Classificationcs.LG
The computer-aided analysis of medical scans is a longstanding goal in the medical imaging field. Currently, deep learning has became a dominant methodology for supporting pathologists and radiologist. Deep learning algorithms have been successfully applied to digital pathology and radiology, nevertheless, there are st…
Model identifies urgent radiology reports with high accuracy.
problem Lack of annotated training data for text analysis.
method Self-supervised contextual language representation using BERT.
result Model achieved 97.0% precision, 93.3% recall, and 95.1% F-measure.
Study finds little progress in medical machine learning benchmarks over 3 years.
problem Lack of meaningful progress in medical machine learning benchmarks for structured healthcare data.
method Comprehensive review and meta-analysis of benchmarks in medical machine learning for structured data.
result Deep recurrent models perform only better than logistic regression on certain clinical prediction tasks.
We developed an automated deep learning system to detect hip fractures from frontal pelvic x-rays, an important and common radiological task. Our system was trained on a decade of clinical x-rays (~53,000 studies) and can be applied to clinical data, automatically excluding inappropriate and technically unsatisfactory …
QC methods improve reliability of machine learning-based image segmentation.
problem Inaccuracies in machine learning algorithms limit their clinical applicability.
method Analysis and validation of QC approaches for automatic segmentation.
result Aggregation of uncertainty and Dice prediction methods improved segmentation reliability.
Infrastructure monitors AI/ML radiology models across multiple sites.
problem Monitoring and improving AI/ML radiology models across multiple sites.
method Interactive radiology reporting, centralized cloud system, post-marketing surveillance.
result Efficient monitoring and iterative development of AI/ML models without radiologist burden.
Conformal Alignment ensures trustworthy outputs from foundation models.
problem Ensuring outputs from foundation models align with human values in high-stakes tasks.
method A framework that trains an alignment predictor using reference data to select trustworthy outputs.
result Conformal Alignment accurately identifies trustworthy outputs via lightweight training over moderate reference data.
The paper explores how neural networks generalize differently from natural and medical images.
problem Discrepancies in generalization error between natural and medical images.
method Established and empirically validated a generalization scaling law with respect to intrinsic dataset properties.
result Higher intrinsic 'label sharpness' of medical images leads to higher adversarial vulnerability.
Many radiological studies can reveal the presence of several co-existing abnormalities, each one represented by a distinct visual pattern. In this article we address the problem of learning a distance metric for plain radiographs that captures a notion of "radiological similarity": two chest radiographs are considered …
On Interpretability of Deep Learning based Skin Lesion Classifiers using Concept Activation Vectorscs.LG
Deep learning skin lesion classifier explained using CAVs.
problem Limited acceptance of deep learning CAD systems due to opaque decision-making.
method Mapped human understandable concepts to RECOD model using CAVs.
result Classifier learns and encodes disease-related concepts in its latent representation.
The study explores statistical methods to interpret radiological models and identify key features.
problem Interpreting complex radiological models for clinical use.
method Exploration of statistical techniques to assess relationships between radiomic features.
result Identification of key relationships and features for improved interpretability.
X-rays are commonly performed imaging tests that use small amounts of radiation to produce pictures of the organs, tissues, and bones of the body. X-rays of the chest are used to detect abnormalities or diseases of the airways, blood vessels, bones, heart, and lungs. In this work we present a stochastic attention-based…
Gaussian Processes outperform other models in estimating uncertainty for radiology report observation detection.
problem Uncertainty quantification in automatic data labelling for semi-supervised learning in clinical NLP.
method Investigation of uncertainty estimates from various predictive models using NLPP and MMPCL metrics.
result Gaussian Processes provide superior performance in quantifying uncertainty for radiology report observation detection.
Deep learning improves MRI analysis of MSK disorders.
problem Accurate and rapid analysis of musculoskeletal disorders from MRI scans.
method Convolutional neural networks (CNN) for automatic classification of knee abnormalities.
result Multi-view deep learning showed promising performance in classifying MSK abnormalities.
Generative adversarial networks have been successfully applied to inpainting in natural images. However, the current state-of-the-art models have not yet been widely adopted in the medical imaging domain. In this paper, we investigate the performance of three recently published deep learning based inpainting models: co…
Novel method reduces radiomic data annotation needs.
problem Insufficient labeled radiomic data for disease diagnosis.
method Collaborative self-supervised learning with two pretext tasks.
result Outperforms other self-supervised methods on radiomic data.
Study proposes a multimodal model for cardiovascular risk prediction using EHRs.
problem Lack of comprehensive risk prediction from EHRs due to unstructured text.
method Proposes a multimodal BiLSTM model integrating structured and unstructured EHR data.
result Proposed BiLSTM model outperforms other DNN architectures in cardiovascular risk prediction.
Study improves deep learning chest X-ray models by incorporating lateral views.
problem Lack of lateral views in training datasets limits deep learning performance.
method Used PadChest dataset with multiple views to explore merging methods.
result Incorporating lateral views increases model performance for 32 labels.
The MIMIC-CXR dataset is (to date) the largest released chest x-ray dataset consisting of 473,064 chest x-rays and 206,574 radiology reports collected from 63,478 patients. We present the results of training and evaluating a collection of deep convolutional neural networks on this dataset to recognize multiple common t…
Data labeling is currently a time-consuming task that often requires expert knowledge. In research settings, the availability of correctly labeled data is crucial to ensure that model predictions are accurate and useful. We propose relatively simple machine learning-based models that achieve high performance metrics in…
With an aging and growing population, the number of women requiring either screening or symptomatic mammograms is increasing. To reduce the number of mammograms that need to be read by a radiologist while keeping the diagnostic accuracy the same or better than current clinical practice, we develop Man and Machine Mammo…
Models extract relevant EHR snippets to aid radiologists in diagnosis.
problem Difficulty in identifying relevant patient record information for diagnosis.
method Distantly supervised transformer-based neural model for extractive summarization.
result Models yield better extractive summaries than unsupervised approaches.
Proposes ConRad model for lung cancer classification using radiomics and interpretable machine learning.
problem Lack of interpretability in deep neural networks for cancer diagnosis.
method Integration of radiomics and DNN-predicted biomarkers in interpretable classifiers (ConRad).
result ConRad models outperform CNNs in five-fold cross-validation.
Improves medication name inference for telemedicine and conversational agents.
problem Challenges in mapping user-friendly medication names to standardized ones.
method Entity-boosted two-tower neural network for ranking SMN to DMP.
result State-of-the-art results achieved with improved attention-based ranking.
The treatment effects of medications play a key role in guiding medical prescriptions. They are usually assessed with randomized controlled trials (RCTs), which are expensive. Recently, large-scale electronic health records (EHRs) have become available, opening up new opportunities for more cost-effective assessments. …
Two large medical dialogue datasets for improving healthcare.
problem Improving healthcare through better dialogue systems.
method Building two large-scale medical dialogue datasets: MedDialog-EN and MedDialog-CN.
result The datasets are the largest medical dialogue datasets to date.
Proposes guidelines for developing medical AI products.
problem Lack of clear pathways for regulating medical AI.
method Statistical risk perspective and deep understanding of machine learning methodologies.
result Enhanced development of medical AI products and regulations.
Paper tackles medical question similarity using domain-relevant embeddings.
problem Identifying same-question pairs in medical contexts.
method Semi-supervised pre-training of a neural network on medical question-answer pairs.
result Our model achieves 82.6% accuracy on medical question similarity task.
Automated system extracts medication regimens from medical conversations.
problem Extract relevant medication information from medical conversations.
method QA task approach, combined QA and Information Extraction, data augmentation, public embeddings, pretraining.
result Improved accuracy in extracting dosage and frequency from 54.28 and 37.13 to 89.57 and 45.94.
A GMM-based method generates new 3D structures from medical images.
problem Generating new medical images from limited data and different modalities.
method Gaussian Mixture Model (GMM) for point-cloud generation.
result Generated point-clouds closely match training samples from the same class.
Bayesian LSTMs in medicinestat.ML
The medical field stands to see significant benefits from the recent advances in deep learning. Knowing the uncertainty in the decision made by any machine learning algorithm is of utmost importance for medical practitioners. This study demonstrates the utility of using Bayesian LSTMs for classification of medical time…
This paper benchmarks privacy-preserving machine learning on medical images.
problem Ensuring privacy in medical image analysis while maintaining model accuracy.
method Comparing Local-DP and DP-SGD for differential privacy in medical imagery.
result Theoretical privacy guarantees do not fully align with real-world performance.
Laboratory testing and medication prescription are two of the most important routines in daily clinical practice. Developing an artificial intelligence system that can automatically make lab test imputations and medication recommendations can save costs on potentially redundant lab tests and inform physicians of a more…
Machine learning constructs problem-based medical records from electronic health records.
problem Difficulty in finding relevant medical information for clinical questions.
method Knowledge base completion using machine learning on electronic health records.
result Automatic construction of problem-based groupings of medications, procedures, and lab tests.
ME2Vec learns medical entity vectors from EHR data.
problem Learning structured information from EHR data.
method Graph-based medical entity embedding using diverse graph embedding techniques.
result ME2Vec outperforms baselines in disease diagnosis prediction.
Enhances medical code predictions for multi-morbidity patients using text classification.
problem Improving accuracy in predicting medical codes for patients with multiple illnesses.
method Used machine learning techniques, including multi-label medical text classification, to enhance predictions.
result High dimensional embeddings pre-trained on health data significantly improve multi-label classification performance.
Paper detects bias in AI medical models using CART.
problem Ensuring fairness in AI medical decision support systems.
method Uses Classification and Regression Trees (CART) algorithm to identify bias.
result Validated the CART approach in both synthetic and real-world data.
Accurate identification and localization of abnormalities from radiology images play an integral part in clinical diagnosis and treatment planning. Building a highly accurate prediction model for these tasks usually requires a large number of images manually annotated with labels and finding sites of abnormalities. In …
Representation learning (RL) plays an important role in extracting proper representations from complex medical data for various analyzing tasks, such as patient grouping, clinical endpoint prediction and medication recommendation. Medical data can be divided into two typical categories, outpatient and inpatient, that h…