Proposes a continuous scan statistic to detect anomalies more accurately.
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Survey of robust clustering methods for hotspot detection.
A novel multi-resolution cluster detection (MCD) method is proposed to identify irregularly shaped clusters in space. Multi-scale test statistic on a single cell is derived based on likelihood ratio statistic for Bernoulli sequence, Poisson sequence and Normal sequence. A neighborhood variability measure is defined to …
BrainCast predicts whole-brain fMRI time series from short scans.
Many methods have been proposed for detecting emerging events in text streams using topic modeling. However, these methods have shortcomings that make them unsuitable for rapid detection of locally emerging events on massive text streams. We describe Spatially Compact Semantic Scan (SCSS) that has been developed specif…
Early detection and precise characterization of emerging topics in text streams can be highly useful in applications such as timely and targeted public health interventions and discovering evolving regional business trends. Many methods have been proposed for detecting emerging events in text streams using topic modeli…
Detecting weak clustered signal in spatial data is important but challenging in applications such as medical image and epidemiology. A more efficient detection algorithm can provide more precise early warning, and effectively reduce the decision risk and cost. To date, many methods have been developed to detect signals…
Paper reproduces a kernel-based scan B-statistic for online change-point detection.
We present a new dataset for form understanding in noisy scanned documents (FUNSD) that aims at extracting and structuring the textual content of forms. The dataset comprises 199 real, fully annotated, scanned forms. The documents are noisy and vary widely in appearance, making form understanding (FoUn) a challenging t…
Gibbs sampling is a Markov Chain Monte Carlo sampling technique that iteratively samples variables from their conditional distributions. There are two common scan orders for the variables: random scan and systematic scan. Due to the benefits of locality in hardware, systematic scan is commonly used, even though most st…
We consider the change-point detection problem of deciding, based on noisy measurements, whether an unknown signal over a given graph is constant or is instead piecewise constant over two connected induced subgraphs of relatively low cut size. We analyze the corresponding generalized likelihood ratio (GLR) statistics a…
3D ConvNets improved with Project & Excite for medical imaging segmentation.
Investigates transfer learning in spatial statistics.
This study improves lung tumor segmentation in mice MRI scans with nnU-Net, reducing annotation needs.
Deep-learning model detects ASD from MRI data with high accuracy.
Computed tomography (CT) generates a stack of cross-sectional images covering a region of the body. The visual assessment of these images for the identification of potential abnormalities is a challenging and time consuming task due to the large amount of information that needs to be processed. In this article we propo…
Identifying anomalous patterns in real-world data is essential for understanding where, when, and how systems deviate from their expected dynamics. Yet methods that separately consider the anomalousness of each individual data point have low detection power for subtle, emerging irregularities. Additionally, recent dete…
Resting-state functional MRI (rs-fMRI) scans hold the potential to serve as a diagnostic or prognostic tool for a wide variety of conditions, such as autism, Alzheimer's disease, and stroke. While a growing number of studies have demonstrated the promise of machine learning algorithms for rs-fMRI based clinical or beha…
Prototype for adaptive electron microscopy scans reduces dose and time.
Deep learning predicts SAH patient mortality from initial CT scans.
Chronic Pulmonary Aspergillosis (CPA) is a complex lung disease caused by infection with Aspergillus. Computed tomography (CT) images are frequently requested in patients with suspected and established disease, but the radiological signs on CT are difficult to quantify making accurate follow-up challenging. We propose …
Substantial evidence indicates that major psychiatric disorders are associated with distributed neural dysconnectivity, leading to strong interest in using neuroimaging methods to accurately predict disorder status. In this work, we are specifically interested in a multivariate approach that uses features derived from …
This work views neural networks as data generating systems and applies anomalous pattern detection techniques on that data in order to detect when a network is processing an anomalous input. Detecting anomalies is a critical component for multiple machine learning problems including detecting adversarial noise. More br…
Machine learning and topological data analysis identify unique geometric and topological features of human papillae.
Polynomial-time test for detecting dense subgraphs in heterogeneous networks.
Improved CNNs detect Alzheimer's with 14% accuracy boost.
We present a novel distribution-free approach, the data-driven threshold machine (DTM), for a fundamental problem at the core of many learning tasks: choose a threshold for a given pre-specified level that bounds the tail probability of the maximum of a (possibly dependent but stationary) random sequence. We do not ass…
The detection of anomalous activity in graphs is a statistical problem that arises in many applications, such as network surveillance, disease outbreak detection, and activity monitoring in social networks. Beyond its wide applicability, graph structured anomaly detection serves as a case study in the difficulty of bal…
We describe two recently proposed machine learning approaches for discovering emerging trends in fatal accidental drug overdoses. The Gaussian Process Subset Scan enables early detection of emerging patterns in spatio-temporal data, accounting for both the non-iid nature of the data and the fact that detecting subtle p…
A scalable Bayesian linear regression framework for spatial data.
Study improves semantic segmentation of LiDAR point clouds for autonomous vehicles.
This study assesses the reproducibility of 1H-MRS scans across different vendors and sessions.
A neural network improves DOA estimation from a single snapshot.
We derive generalized estimators for a number of spatial statistics that have been used in the analysis of spatially resolved omics data, such as Ripley's K, H and L functions, clustering index, and degree of clustering, which allow these statistics to be calculated on data modelled by arbitrary random measures (RMs). …
Automated rock fragmentation assessment using deep learning and spatial statistics.
Deep models improve spatial and spatio-temporal data analysis.
Statistical image reconstruction (SIR) methods are studied extensively for X-ray computed tomography (CT) due to the potential of acquiring CT scans with reduced X-ray dose while maintaining image quality. However, the longer reconstruction time of SIR methods hinders their use in X-ray CT in practice. To accelerate st…
CNNs predict spatial fields from sparse data.
Scanning Transmission Electron Microscopy (STEM) has become the main stay for materials characterization on atomic level, with applications ranging from visualization of localized and extended defects to mapping order parameter fields. In the last several years, attention was attracted by potential of STEM to explore b…
We introduce elastic geodesic grids for easy-to-fabricate, deployable structures.
This article reports on an investigation of the use of convolutional neural networks to predict the visual attention of chess players. The visual attention model described in this article has been created to generate saliency maps that capture hierarchical and spatial features of chessboard, in order to predict the pro…
PriorVAE uses VAEs to efficiently encode spatial priors for small-area estimation.
Random scan CAVI converges linearly under log-concave assumptions.
New technique halves scan time for multi-echo MR images.
Recent results in coupled or temporal graphical models offer schemes for estimating the relationship structure between features when the data come from related (but distinct) longitudinal sources. A novel application of these ideas is for analyzing group-level differences, i.e., in identifying if trends of estimated ob…
Proposes LSCP for spatial data uncertainty quantification.
We present a novel subset scan method to detect if a probabilistic binary classifier has statistically significant bias -- over or under predicting the risk -- for some subgroup, and identify the characteristics of this subgroup. This form of model checking and goodness-of-fit test provides a way to interpretably detec…
We introduce SparseVM, a method that registers clinical-quality 3D MR scans both faster and more accurately than previously possible. Deformable alignment, or registration, of clinical scans is a fundamental task for many clinical neuroscience studies. However, most registration algorithms are designed for high-resolut…