A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
String graphs are closely related to planar graphs in terms of distances.
We extend the notion of intersection graphs for knots in the theory of finite type invariants to string links. We use our definition to develop weight systems for string links via the adjacency matrix of the intersection graph, and show that these weight systems are related to the weight systems induced by the Conway a…
In previous work, the author defined the intersection graph of a chord diagram associated with string links (as in the theory of finite type invariants). In this paper, we classify the trees which can be obtained as intersection graphs of string link diagrams.
Given a smooth closed manifold M with a family {L_i} of closed submanifolds, we consider the free loop space LM and the spaces PM(L_i,L_j) of open strings (paths g:[0,1]->M with g(0) in L_i, and g(1) in L_j). We construct string topology operations resulting in an open-closed TQFT on the family (h_*(LM),h_*(PM(L_i,L_j)…
Classifies colored links and spatial graphs up to colored link-homotopy.
New formulas for spatial 2-bouquet graphs discovered.
In these lecture notes we discuss a body of work in which Morse theory is used to construct various homology and cohomology operations. In the classical setting of algebraic topology this is done by constructing a moduli space of graph flows, using homotopy theoretic methods to construct a virtual fundamental class, an…
Extends string-net theory to 3D TQFT via surface graphs and surgery.
Variational autoencoders (VAEs) defined over SMILES string and graph-based representations of molecules promise to improve the optimization of molecular properties, thereby revolutionizing the pharmaceuticals and materials industries. However, these VAEs are hindered by the non-unique nature of SMILES strings and the c…
In previous work, we defined the intersection graph of a chord diagram associated with a string link (as in the theory of finite type invariants). In this paper, we look at the case when this graph is a tree, and we show that in many cases these trees determine the chord diagram (modulo the usual 1-term and 4-term rela…
This paper is an exposition of the new subject of String Topology. We present an introduction to this exciting new area, as well as a survey of some of the latest developments, and our views about future directions of research. We begin with reviewing the seminal paper of Chas and Sullivan, which started String Topolog…
Study of spaces of pure braids and string links using diagrams and integrals.
New presentation of Goussarov-Habiro Lie algebra using primitive Feynman diagrams.
In this article we calculate the n-string braid groups of certain non-contractible graphs. We use techniques from the work of A. Abrams, F. Connolly and M. Doig combined with Van Kampen's Theorem to prove these results.
Graphs and networks are a key research tool for a variety of science fields, most notably chemistry, biology, engineering and social sciences. Modeling and generation of graphs with efficient sampling is a key challenge for graphs. In particular, the non-uniqueness, high dimensionality of the vertices and local depende…
Sequence feature embedding is a challenging task due to the unstructuredness of sequence, i.e., arbitrary strings of arbitrary length. Existing methods are efficient in extracting short-term dependencies but typically suffer from computation issues for the long-term. Sequence Graph Transform (SGT), a feature embedding …
In this work, we discuss graph like image of curves under moment maps and their relation with the Newton polygon of the curve, which has applications to Lagrangian torus fibration of Calabi-Yau manifolds.
A string-net model associates a vector space to a surface in terms of graphs decorated by objects and morphisms of a pivotal fusion category modulo local relations. String-net models are usually considered for spherical fusion categories, and in this case the vector spaces agree with the state spaces of the correspondi…
Inverse braid monoid describes a structure on braids where the number of strings is not fixed. So, some strings of initial may be deleted. In the paper we show that many properties and objects based on braid groups may be extended to the inverse braid monoids. Namely we prove an inclusion into a monoid of partial m…
These are notes of a mini-course given at Dennisfest in June 2001. The goal of these notes is to give a self-contained survey of deformation quantization, operad theory, and graph homology. Some new results related to "String Topology" and cacti are announced in Section 2.7.
We present novel graph kernels for graphs with node and edge labels that have ordered neighborhoods, i.e. when neighbor nodes follow an order. Graphs with ordered neighborhoods are a natural data representation for evolving graphs where edges are created over time, which induces an order. Combining convolutional subgra…
We seek to automate the design of molecules based on specific chemical properties. In computational terms, this task involves continuous embedding and generation of molecular graphs. Our primary contribution is the direct realization of molecular graphs, a task previously approached by generating linear SMILES strings …
Derives path integrals for perturbative strings on various backgrounds.
The moduli space of Riemann surfaces with at least two punctures can be decomposed into a cell complex by using a particular family of ribbon graphs called Nakamura graphs. We distinguish the moduli space with all punctures labelled from that with a single labelled puncture. In both cases, we describe a cell decomposit…
Identifies all perturbative vacua in bosonic string theory.
String geometry theory connects strings to space-time and finds string vacua.
In this paper we extend our correlation functions to the open/closed case. This gives rise to actions of an open/closed version of the Sullivan PROP as well as an action of the relevant moduli space. There are several unexpected structures and conditions that arise in this extension which are forced upon us by consider…
Let G be a compact Lie group. By work of Chataur and Menichi, the homology of the space of free loops in the classifying space of G is known to be the value on the circle in a homological conformal field theory. This means in particular that it admits operations parameterized by homology classes of classifying spaces o…
Derives path-integrals for superstrings on curved backgrounds using string geometry theory.
We use Polyak's skein relation to give a new proof that Milnor's string link homotopy invariants are finite type invariants, and to develop a recursive relation for their associated weight systems. We show that the obstruction to the triviality of these weight systems is the presence of a certain kind of spanning tree …
Chiral string integrands simplify to ambitwistor string integrands in the tensionless limit.
Perturbative string amplitudes are correctly derived from the string geometry theory, which is one of the candidates of a non-perturbative formulation of string theory. In order to derive non-perturbative effects rather easily, we formulate topological string geometry theory. We derive the perturbative partition functi…
This paper proposes an axiomatic for Cyclic Foam Topological Field theories. That is Topological Field theories, corresponding to String theories, where particles are arbitrary graphs. World surfaces in this case are two-manifolds with one-dimensional singularities. We proved that Cyclic Foam Topological Field theories…
Graph Weighted Models (GWMs) have recently been proposed as a natural generalization of weighted automata over strings and trees to arbitrary families of labeled graphs (and hypergraphs). A GWM generically associates a labeled graph with a tensor network and computes a value by successive contractions directed by its e…
A virtual string is a scheme of self-intersections of a closed curve on a surface. We study algebraic invariants of strings as well as two equivalence relations on the set of strings: homotopy and cobordism. We show that the homotopy invariants of strings form an infinite dimensional Lie group. We also discuss connecti…
A virtual string can be defined as an equivalence class of planar diagrams under certain kinds of diagrammatic moves. Virtual strings are related to virtual knots in that a simple operation on a virtual knot diagram produces a diagram for a virtual string. In this paper we consider three operations on a virtual string …
There is an interpretation of open string field theory in algebraic topology. An interpretation of closed string field theory can be deduced from this open string theory to obtain as well the interpretation of open and closed string field theory combined.
New formulas link string bordism to integers.
Extended Alexander groups are used to define an invariant for open virtual strings. Examples of non-commuting open strings and a ribbon-concordance obstruction are given. An example is given of a slice virtual open string that is not ribbon. Definitions are extended to open n-strings.
BOSS optimizes string inputs using string kernels and genetic algorithms.
We develop topological methods for analyzing difference topology experiments involving 3-string tangles. Difference topology is a novel technique used to unveil the structure of stable protein-DNA complexes involving two or more DNA segments. We analyze such experiments for the Mu protein-DNA complex. We characterize t…
String topology coproduct and Turaev cobracket computed for surfaces.
Deep generative models for graph-structured data offer a new angle on the problem of chemical synthesis: by optimizing differentiable models that directly generate molecular graphs, it is possible to side-step expensive search procedures in the discrete and vast space of chemical structures. We introduce MolGAN, an imp…
We present a finite-dimensional and smooth formulation of string structures on spin bundles. It uses trivializations of the Chern-Simons 2-gerbe associated to this bundle. Our formulation is particularly suitable to deal with string connections: it enables us to prove that every string structure admits a string connect…
Cobordism of virtual string links on strands is a combinatorial generalization of link cobordism. There exists a bijection between virtual string links up to cobordisms and elements of the group . This paper also shows that virtual string links up to unwelded equivalence are classified by those…
We study the cluster categories arising from marked surfaces (with punctures and non-empty boundaries). By constructing skewed-gentle algebras, we show that there is a bijection between tagged curves and string objects. Applications include interpreting dimensions of as intersection numbers of ta…
Paper shows string cobordism at 24 dims can be determined by elliptic genus.
Introduces string structures linking to loop spaces.