New method aggregates bootstrapped DAGs for causal discovery.
problem Aggregation of bootstrapped DAGs ignores higher-order structures.
method Theoretical framework and new DAG aggregation algorithm.
result Proposed method outperforms state-of-the-art solutions.
This paper considers the problem of estimating the structure of multiple related directed acyclic graph (DAG) models. Building on recent developments in exact estimation of DAGs using integer linear programming (ILP), we present an ILP approach for joint estimation over multiple DAGs, that does not require that the ver…
Simulated DAGs can mislead structure learning algorithms due to variance patterns.
problem Structure learning algorithms can be misled by variance patterns in simulated DAG models.
method Introduced varsortability as a measure of agreement between marginal variance order and causal order.
result Performance of structure learning algorithms can be explained by high varsortability, but this does not generalize to real-world data.
Learning DAG or Bayesian network models is an important problem in multi-variate causal inference. However, a number of challenges arises in learning large-scale DAG models including model identifiability and computational complexity since the space of directed graphs is huge. In this paper, we address these issues in …
This paper proposes MM-DAGs for analyzing traffic congestion, learning multiple DAGs jointly.
problem Analyzing multi-modal traffic data with overlapping and distinct variables.
method Developed MM-DAGs for multi-task, multi-modal DAG learning, using multi-modal regression and CD measure.
result Proved the effectiveness of MM-DAGs in traffic congestion analysis.
Bayesian method identifies causal DAG structure from non-Gaussian errors.
problem Learning causal structure from non-Gaussian errors in Bayesian networks.
method Bayesian hierarchical model with DAG prior for non-Gaussian errors.
result Posterior DAG selection consistency achieved under mild assumptions.
Efficiently learns linear non-Gaussian DAGs with noisy nodes.
problem Learning DAGs with non-Gaussian noise and diverging number of nodes.
method Proposes a novel method using topological layers for bottom-up reconstruction and consistent parent-child relations.
result Topological layers can be exactly reconstructed and parent-child relations established without faithfulness assumption.
The paper develops personalized DAG models for web user behavior.
problem Understanding user behavior transitions between websites with user heterogeneity and network dependency.
method Personalized Binomial DAG models with network-structured covariates, embedding network structure into a dimension-reduced covariate, learning node neighborhoods, and exploring variance-mean relation.
result The proposed algorithm outperforms state-of-the-art competitors in heterogeneous data.
Cluster-DAGs improve causal discovery with prior knowledge.
problem Finding cause-effect relationships from high-dimensional data.
method Cluster-DAGs as prior knowledge framework, modified constraint-based algorithms Cluster-PC and Cluster-FCI.
result Cluster-PC and Cluster-FCI outperform baselines without prior knowledge.
Bayesian method models binary response and covariates for two groups, estimating causal relationships.
problem Estimating causal relationships between binary response and covariates in observational data.
method Gaussian DAG-probit model with MCMC sampling for posterior distribution estimation.
result Validated method on simulated and real datasets, showing value of grouping variable in causality.
New method tests DAGs without assuming linear or independent data.
problem Testing DAGs with nonlinear and time-dependent data.
method Structural, supervised and generative adversarial learning.
result Asymptotic guarantees for the test, allowing diverging data dimensions.
Paper learns DAGs with quadratic variance functions efficiently.
problem Learning DAGs with quadratic variance functions.
method Introduces topological layers to reconstruct DAGs hierarchically.
result Efficient algorithm reduces computational cost.
BCDAG learns causal DAGs from Gaussian data using MCMC.
problem Learning causal DAGs from Gaussian observational data.
method Bayesian approach using MCMC for scalability and convergence diagnostics.
result Efficient scalability with observations and variables.
DAG-FOCI learns causal relationships without parametric assumptions.
problem Learning causal structure with minimal assumptions on functionals and noise.
method DAG-FOCI, a fast algorithm based on FOCI variable selection.
result Theoretical and conservative guarantees for causal claims.
We propose a linear-time, single-pass, top-down algorithm for multiple testing on directed acyclic graphs (DAGs), where nodes represent hypotheses and edges specify a partial ordering in which hypotheses must be tested. The procedure is guaranteed to reject a sub-DAG with bounded false discovery rate (FDR) while satisf…
Paper introduces a new identifiability criterion for DAGs using conditional variances.
problem Challenges in discovering causal relationships from observational data.
method Introduces a novel identifiability criterion for DAGs using conditional variances. Uses weak majorization on Cholesky factor of covariance matrix for learning DAGs.
result Demonstrates effectiveness of the new approach in recovering DAGs through simulations and real data analysis.
New proof shows how to identify DAGs with weakly increasing errors.
problem Identifying the true DAG in models with weakly increasing error variances.
method Minimum-trace DAG method and hill climbing algorithm with R2R neighborhood.
result Hill climbing algorithm without strict local optima under weakly increasing error variances.
Bayesian method learns causal orderings from heterogeneous data.
problem Learning causal structure from heterogeneous data.
method Order-based Bayesian framework for Gaussian DAG models.
result Causal ordering is identifiable up to two permutations.
A new differentiable model for sampling DAGs that speeds up optimization.
problem Efficiently sampling and learning DAG structures in continuous optimization.
method DP-DAG model with VI-DP-DAG for DAG learning from data.
result VI-DP-DAG outperforms other methods in DAG structure and causal mechanism learning.
A new method finds DAG models without ground truth.
problem Finding DAG models without ground truth.
method Markov Checker test and Cross-Algorithm Frugality Search (CAFS).
result Models can be chosen without ground truth.
Paper proposes a new method to identify causal graphs with latent variables using higher-order cumulants.
problem Estimating causal directed acyclic graphs with latent confounders.
method Uses higher-order cumulants to identify causal structures among observed and latent variables.
result Validates the proposed algorithm through simulations and real-world data.
ZICO learns DAGs from zero-inflated count data efficiently.
problem Learning network structures from zero-inflated count data.
method ZICO uses node-wise likelihoods with canonical links and a differentiable surrogate constraint for acyclicity.
result ZICO achieves superior performance and faster runtimes on simulated data.
DAGgr aggregates multiple DAGs to stabilize causal structure learning.
problem Stability in learning causal structure from data.
method Model averaging of candidate DAGs weighted by predictive likelihood, with acyclicity enforced.
result DAGgr consistently outperforms individual DAGs and bootstrap-aggregation baselines.
Paper proposes a fast algorithm to recover causal DAGs with latent variables.
problem Discovering causal relationships in the presence of latent variables.
method Cholesky factorization of covariance matrix with optimization for latent variables.
result The algorithm significantly outperforms previous methods in synthetic and real-world datasets.
Fuzzy cognitive maps (FCMs) model feedback causal relations in interwoven webs of causality and policy variables. FCMs are fuzzy signed directed graphs that allow degrees of causal influence and event occurrence. Such causal models can simulate a wide range of policy scenarios and decision processes. Their directed loo…
Paper proposes a method to improve DAG structure reconstruction using auxiliary DAGs.
problem Improving DAG structure reconstruction with limited data.
method Introduces structural similarity measures and a transfer learning framework.
result Significant improvement in DAG reconstruction, even with dissimilar auxiliary DAGs.
A new method infers causal gene regulatory networks from parallel CRISPR interventions and transcriptomic data.
problem Learning causal gene regulatory networks from observational data is complicated by lack of identifiability and a combinatorial solution space.
method A continuous optimization framework that leverages observational and interventional data to infer a single causal structure, assuming a linear Structural Equation Model (SEM).
result A provably consistent estimator of the true DAG under mild assumptions.
Paper studies sparsity and DAG constraints for learning linear DAGs.
problem Learning DAGs from data is challenging due to the large search space.
method Formulates structure learning as a constrained optimization problem with soft sparsity and DAG constraints.
result Soft sparsity and DAG constraints lead to an easier optimization problem.
A new method learns DAGs from Gaussian data without verifying acyclicity.
problem Learning DAGs from Gaussian data without verifying acyclicity.
method Relaxation technique for permutation matrix estimation and cyclic coordinatewise descent for sparse Cholesky factor estimation.
result The method recovers DAGs without verifying acyclicity constraints.
Bayesian structure learning improved using GFlowNets.
problem Inferring Bayesian network structure from data.
method Using Generative Flow Networks (GFlowNets) for approximating posterior DAG distributions.
result DAG-GFlowNet provides an accurate approximation of the posterior over DAGs.
Bayesian networks, with structure given by a directed acyclic graph (DAG), are a popular class of graphical models. However, learning Bayesian networks from discrete or categorical data is particularly challenging, due to the large parameter space and the difficulty in searching for a sparse structure. In this article,…
New DAG constraints improve differentiable DAG learning.
problem Recovering DAG structures from observational data is hard due to combinatorial optimization.
method Developed analytic functions to formulate DAG constraints, closed under differentiation, summation, and multiplication.
result Analytic DAG constraints outperform previous methods in various settings.
Deep Gaussian Processes model functions on DAGs with partially observed data.
problem Reconstructing and inferring from partially observed functions on DAGs with noisy measurements.
method Place priors over functions on DAGs, theoretically study prior-collapse behavior, and offer a structured variational approximation.
result Almost-sure lower bounds on the preservation of input distinctions and interpretability of simulator hierarchies.
Local method identifies causal relations in Markov equivalent DAGs.
problem Identifying causal relations when multiple DAGs are Markov equivalent.
method Graphical condition and local criteria for identifying causal paths.
result Local learning algorithm efficiently identifies causal variables.
Directed acyclic graphs (DAGs) are commonly used to represent causal relationships among random variables in graphical models. Applications of these models arise in the study of physical, as well as biological systems, where directed edges between nodes represent the influence of components of the system on each other.…
New method improves DAG learning by using large coefficients for higher-order terms.
problem Recovering DAG structures from observational data is challenging due to combinatorial optimization.
method Proposes truncated matrix power iteration to approximate DAG constraints efficiently.
result Empirically outperforms previous methods by a factor of 3 or more in structural Hamming distance.
Several real problems ranging from text classification to computational biology are characterized by hierarchical multi-label classification tasks. Most of the methods presented in literature focused on tree-structured taxonomies, but only few on taxonomies structured according to a Directed Acyclic Graph (DAG). In thi…
CASPER improves DAG structure learning by integrating graph structure into score function.
problem Discovering suboptimal DAGs and model vulnerabilities in causal discovery.
method CASPER integrates graph structure into the score function as a new measure in the causal space, enhancing DAG structure learning via adaptive attention to DAG-ness.
result CASPER outperforms state-of-the-art methods in terms of accuracy and robustness.
This work sets a universal lower bound for learning causal DAGs with atomic interventions.
problem Learning causal DAGs using only observational data results in a Markov equivalence class, requiring interventions to fully orient.
method Developed CBSP orderings and used them to prove a universal lower bound on the number of single-node interventions needed.
result The universal lower bound is within a factor of two of the minimum number of single-node interventions required to fully orient a given Markov equivalence class.
DrBO uses Bayesian optimization to learn DAGs more efficiently.
problem Inaccurate and inefficient DAG learning from observational data.
method Bayesian optimization to find high-scoring DAGs efficiently.
result DrBO finds higher-scoring DAGs more efficiently than existing methods.
Bayesian networks are a class of popular graphical models that encode causal and conditional independence relations among variables by directed acyclic graphs (DAGs). We propose a novel structure learning method, annealing on regularized Cholesky score (ARCS), to search over topological sorts, or permutations of nodes,…
In this paper, we develop a new approach to learning high-dimensional Poisson directed acyclic graphical (DAG) models from only observational data without strong assumptions such as faithfulness and strong sparsity. A key component of our method is to decouple the ordering estimation or parent search where the problems…
Graph structured data are abundant in the real world. Among different graph types, directed acyclic graphs (DAGs) are of particular interest to machine learning researchers, as many machine learning models are realized as computations on DAGs, including neural networks and Bayesian networks. In this paper, we study dee…
Efficiently learns DAG structures without cycles.
problem Learning DAG structures efficiently with constraints.
method Proposes DAG-NoCurl, a two-step algorithm to find and project acyclic graphs.
result Significantly improves efficiency over existing methods, often by more than one order of magnitude.
The search space of Bayesian Network structures is usually defined as Acyclic Directed Graphs (DAGs) and the search is done by local transformations of DAGs. But the space of Bayesian Networks is ordered by DAG Markov model inclusion and it is natural to consider that a good search policy should take this into account.…
Bayesian method for causal discovery from unknown general interventions.
problem Learning causal DAGs from unknown interventions that modify parent sets.
method Bayesian approach with MCMC for approximating posterior DAGs and intervention targets.
result Bayesian method can identify DAGs and intervention targets up to equivalence classes.
Paper proposes DAG-DB for learning discrete DAGs via backpropagation.
problem Learning Directed Acyclic Graphs (DAGs) from data.
method DAG-DB uses Discrete Backpropagation with I-MLE and Straight-Through Estimation.
result DAG-DB learns DAGs effectively using probabilistic sampling and backpropagation.
New method discovers causal relationships in large-scale data.
problem Discovering causal relationships in large datasets with thousands of variables.
method Factor Directed Acyclic Graphs (f-DAGs) combined with continuous optimization.
result Achieved causal discovery on thousands of variables.