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10 results for seriation

Active seriation recovers item order from noisy pairwise similarity measurements.

problem Recovering an unknown item ordering from noisy pairwise similarity measurements.
method Proposes an active seriation algorithm that provably recovers the latent ordering with high probability.
result Establishes optimal performance guarantees for successful recovery under a uniform separation condition.

We describe a seriation algorithm for ranking a set of items given pairwise comparisons between these items. Intuitively, the algorithm assigns similar rankings to items that compare similarly with all others. It does so by constructing a similarity matrix from pairwise comparisons, using seriation methods to reorder t…

2014-06-20abs ↗pdf ↗

Given a matrix the seriation problem consists in permuting its rows in such way that all its columns have the same shape, for example, they are monotone increasing. We propose a statistical approach to this problem where the matrix of interest is observed with noise and study the corresponding minimax rate of estimatio…

2016-07-08abs ↗pdf ↗

Estimates latent positions in 1D torus from noisy pairwise affinities.

problem Estimating latent positions in a 1D torus from noisy pairwise affinities.
method Introduced an estimation procedure with provable localization error of O(log(n)/n)O(\sqrt{\log(n)/n}).
result The estimation procedure provably localizes latent positions with a maximum error of O(log(n)/n)O(\sqrt{\log(n)/n}).

New method uses almost orthonormal bases to prove low-degree lower bounds in complex statistical models.

problem Proving statistical-computational gaps in high-dimensional models with planted structures.
method Constructing an almost orthonormal polynomial basis under the planted distribution.
result Established new low-degree lower bounds for various complex models.

New algorithm optimizes matrix reordering for noisy disordered matrices.

problem Optimizing matrix reordering for noisy disordered matrices in single-cell biology and metagenomics.
method Proposed a polynomial-time adaptive sorting algorithm to improve upon spectral seriation.
result Our algorithm achieves superior performance compared to existing methods in real datasets.

cGAP visualizes high-dimensional categorical data with interpretable geometric structure.

problem Lack of visualization tools for high-dimensional categorical data.
method cGAP uses Homogeneity Analysis (HOMALS) to embed data in a 3D space and maps it to colors.
result cGAP reveals coherent clusters, outliers, and local-to-global structure in categorical data.

cGAP visualizes high-dimensional categorical data with interpretable geometric structure.

problem Lack of visualization tools for high-dimensional categorical data.
method cGAP uses Homogeneity Analysis (HOMALS) to embed data in a 3D space and maps it to colors for visualization.
result cGAP reveals coherent clusters, outliers, and local-to-global structure in categorical data.