Graphs predict reaction conditions for organic chemistry.
problem Predicting specific reaction conditions in organic chemistry.
method Graph Neural Networks (GNNs) for modeling reaction graphs.
result GNNs can identify specific graph features affecting reaction conditions.
Reaction prediction remains one of the major challenges for organic chemistry, and is a pre-requisite for efficient synthetic planning. It is desirable to develop algorithms that, like humans, "learn" from being exposed to examples of the application of the rules of organic chemistry. We explore the use of neural netwo…
A new method predicts organic reactions faster and more accurately.
problem Predicting reaction outcomes in complex molecules is computationally challenging.
method Identifies reaction centers, enumerates candidate products, and scores them using a Weisfeiler-Lehman Difference Network.
result Framework outperforms template-based methods with a 10% margin and runs faster.
Neural model predicts organic reactions with high accuracy.
problem Predicting outcomes of complex organic chemistry reactions.
method Sequence-to-sequence model trained end-to-end, data-driven.
result Achieved 80.1% top-1 accuracy on a smaller dataset.
METRO predicts reactions using minimal templates, reducing computational overhead and achieving state-of-the-art results.
problem Predicting possible reaction substrates for complex molecules from simpler precursors.
method METRO (Molecule-Edit Templates for RetrOsynthesis) uses minimal templates to predict reactions efficiently and accurately.
result METRO achieves state-of-the-art results on standard benchmarks, reducing computational overhead.
New model predicts chemical reactions with conditional graph logic networks.
problem Predicting chemical reactions for synthesizing molecules.
method Conditional Graph Logic Network (CGLN) based on graph neural networks.
result Significant improvement of 8.1% over state-of-the-art methods.
Bayesian algorithm discovers synthetic routes from target molecules.
problem Identifying synthetic routes from desired products.
method Bayesian inference and combinatorial optimization.
result Algorithm rediscovered 80.3% and 50.0% of known synthetic routes.
Reactmine infers chemical reactions from time series data, overcoming sparse model limitations.
problem Inferring chemical reaction networks from time series data, especially when initial conditions are not varied.
method Sequential reaction inference in a search tree, ranking and re-optimizing kinetics.
result Reactmine successfully infers preponderant regulations in real datasets, matching model-based analyses.
Generative model predicts synthesizable molecules from reactants.
problem Generating molecules with desirable properties doesn't guarantee synthesis feasibility.
method Proposes a realistic synthesis process model with reactant selection and reaction prediction.
result Model generates diverse, valid, and unique synthesizable molecules.
Retro* uses neural networks to efficiently find high-quality synthetic routes in organic chemistry.
problem Finding efficient synthetic routes in organic chemistry is challenging due to the vast search space.
method Retro* is a neural-based A*-like algorithm that learns a neural search bias to guide efficient best-first search.
result Retro* outperforms existing methods in both success rate and solution quality while being more efficient.
Model predicts electron paths in chemical reactions.
problem Predicting electron movements in chemical reactions.
method Designing a model to learn electron paths from raw reaction data.
result Model achieves excellent performance on USPTO reaction dataset.
We use the formalism of Geometrothermodynamics to describe chemical reactions in the context of equilibrium thermodynamics. Any chemical reaction in a closed system is shown to be described by a geodesic in a 2−dimensional manifold that can be interpreted as the equilibrium space of the reaction. We first show this i…
CRNN discovers chemical reaction pathways from data.
problem Challenging to infer reaction pathways for complex systems.
method Neural network approach that satisfies fundamental physics laws.
result CRNN autonomously discovers reaction pathways from species concentration data.
MEGAN models chemical reactions as graph edits, improving synthesis planning.
problem Generating and predicting chemical reactions under constraints.
method End-to-end encoder-decoder neural model inspired by arrow pushing formalism.
result State-of-the-art accuracy in standard benchmarks for retrosynthesis prediction.
Upper bound on CRN reaction rates derived using information geometry.
problem Challenging task of deriving an upper bound on reaction rates of nonlinear, discrete CRNs.
method Information geometric approach using natural gradient.
result Validated through numerical simulations, demonstrating faster convergence in specific CRNs.
Novel deep learning method predicts reaction coordinates and future MD trajectories.
problem Identifying optimal reaction coordinates for chemical reactions.
method Regularized Sparse Autoencoder (RSE) for discovering reaction coordinates and predicting MD trajectory evolution.
result RSE helps in choosing a small but important set of reaction coordinates.
Gryffin optimizes categorical variables in materials design, leveraging expert knowledge.
problem Optimizing categorical variables in complex design choices like molecule selection.
method Bayesian optimization with smooth approximations to categorical distributions, incorporating expert knowledge.
result Gryffin accelerates discovery of promising molecules and materials, highlighting relevant correlations.
Chemical networks outperform spiking neural networks in classification tasks.
problem Learning tasks with spiking neural networks require hidden layers, which are computationally expensive.
method Used deterministic mass-action kinetics to prove chemical reaction networks without hidden layers can solve tasks previously solved by spiking neural networks.
result A chemical reaction network without hidden layers outperforms a spiking neural network with hidden layers in a handwritten digit classification task.
End-to-end model detects emotions and predicts Facebook reactions.
problem Detecting emotions and predicting reactions on Facebook posts.
method Jointly learns emotions and reactions using neural model with logic formulas as constraints.
result Model improves both emotion classification and reaction prediction.
Bayesian inference for biochemical reaction networks using jump-diffusion approximations.
problem Estimating hidden quantities in poorly characterized biochemical processes.
method Developed a Bayesian inference algorithm based on Markov chain Monte Carlo and sequential Monte Carlo methods.
result Numerical evaluation of the algorithm for a partially observed multi-scale birth-death process.
We generalize the reaction-diffusion model A + B -> 0 in order to study the impact of an excess of A (or B) at the reaction front. We provide an exact solution of the model, which shows that linear response breaks down: the average displacement of the reaction front grows as the square-root of the imbalance. We argue t…
New method uses machine learning to analyze catalyst reactions.
problem Understanding complex reaction mechanisms in catalytic materials.
method Combining transient kinetics and machine learning.
result Correct estimates of micro-kinetic coefficients and mechanism.
Model predicts diverse chemical reactions for target compounds.
problem Making generalizable and diverse retrosynthetic reaction predictions.
method Transformer architecture with novel pre-training methods and a latent variable model.
result Improves performance on USPTO-50k dataset, generating more diverse predictions.
Study the singular limit of a boundary reaction equation, showing energy concentration and varifold support.
problem Analyzing the singular limit of a boundary reaction equation.
method Investigates the critical points of the boundary reaction equation \((-Δ)^{\frac{1}{2}}u = \frac{1}{\varepsilon}(u-u^3)\) in \(U \subset \mathbb{R}^n\).
result Shows existence of an (n−1)-rectifiable energy concentration set and associates limit energy measures to a stationary varifold. Paper introduces a graph-based approach for retrosynthesis prediction.
problem Predicting precursor molecules for target molecules in organic synthesis.
method Graph-based approach that predicts graph edits and synthons expansion.
result Achieves top-1 accuracy of 53.7%.
Hopfield networks improve reaction template prediction for few/zero-shot scenarios.
problem Predicting reaction templates for new molecules in CASP.
method Adapted Hopfield networks to associate reaction templates, molecules, and structural information.
result Significantly improved performance for templates with few or zero training examples.
China's stock market reacts positively to PMI news but not to negative news.
problem Understanding asymmetric responses to PMI announcements in China's stock market.
method Empirical investigation of stock market reactions to PMI announcements.
result China's stock market reacts positively to positive PMI news but not to negative news.
The study distills news sources to analyze stock reactions, finding sentiment has asymmetric and sector-specific effects.
problem Analyzing the influence of financial text sources on stock reactions.
method Mixed text sources from professional platforms, blogs, and message boards were distilled using different lexica to analyze sentiment variables.
result Sentiment has an asymmetric and sector-specific effect on stock reactions.
Paper presents a multi-label topic model for financial texts with high performance and insights into market reactions.
problem Analyzing financial text data for market reactions and understanding topic interactions.
method Trained a multi-label topic model on a financial text database, achieved high macro F1 score, and investigated topic interactions.
result Model achieves high performance (macro F1 > 85%) and reveals significant market reactions to topic co-occurrences.
Global solutions and smoothing effects for reaction-diffusion equations on manifolds.
problem Global existence and smoothing effects for reaction-diffusion equations on Riemannian manifolds.
method Functional analytic methods, Sobolev and Poincaré inequalities.
result Existence of global solutions under certain conditions on the manifold.
Study shows neural operators can efficiently solve complex reaction-diffusion systems.
problem Efficiently solving nonlinear reaction-diffusion systems using neural operators.
method Laplacian-based neural operators applied to a generalized Gierer-Meinhardt system.
result Explicit approximation error bounds established for neural operators in terms of network parameters.
Study shows SEC crypto classification led to significant market reactions.
problem Impact of SEC classification of crypto assets as securities.
method Event study methodology focusing on explicitly named crypto assets.
result Significant adverse market reactions, with returns plummeting 12% over one week.
Coronavirus impacts oil prices through volatility and direct effects.
problem Impact of coronavirus on oil prices and volatility.
method ARDL estimation controlling for financial volatility and US economic policy uncertainty.
result COVID-19 daily infections have a negative long-term impact on oil prices.
Deep RL finds efficient pathways for sugar to chemicals.
problem Finding efficient pathways from sugar to value-added chemicals.
method Markov decision process with deep reinforcement learning.
result Promising preliminary results in efficient biomass conversion.
Study analyzes Facebook reactions to scholarly articles.
problem Lack of analysis on click-based responses to scholarly content.
method Developed a new dataset of Facebook Reactions, analyzed statistical trends, and trained/tested supervised learning algorithms.
result Preliminary tests suggest stratification in user following based on page subject matter.
Empirical study finds IT project costs follow a power-law distribution, exposing risk underestimation.
problem IT project cost overruns are underestimated due to normal distribution assumptions.
method Analyzed 5,392 IT projects to examine cost overruns following a power-law distribution.
result IT project cost overruns follow a power-law distribution with a fat tail of extreme overruns.
Bounds on chemical reaction network relaxation rates using convex analysis.
problem Understanding relaxation dynamics in chemical reaction networks.
method Convex analysis, generalized gradient flows, singular values of stoichiometric matrix.
result Bounds on Kullback-Leibler divergence to equilibrium for CRNs.
Meta-analysis of USDA forecasts and market reactions studies.
problem Evaluating the accuracy and market reactions to USDA forecasts.
method Conducted a meta-analysis on two groups of studies focusing on USDA forecasts and market reactions.
result There is heterogeneity in the results of studies evaluating USDA forecasts and market reactions.
We describe a fully data driven model that learns to perform a retrosynthetic reaction prediction task, which is treated as a sequence-to-sequence mapping problem. The end-to-end trained model has an encoder-decoder architecture that consists of two recurrent neural networks, which has previously shown great success in…
We address the problem of optimal Central Bank intervention in the exchange rate market when interventions create feedback in the rate dynamics. In particular, we extend the work done on optimal impulse control by Cadenillas and Zapatero to incorporate temporary market reactions, of random duration and level, to Bank i…
Researchers prove inequalities for reaction-diffusion systems using a new curvature-dimension condition.
problem Proving Li-Yau and Harnack inequalities for systems of linear reaction-diffusion equations.
method Introducing a hybrid curvature-dimension condition and proving a differential Harnack estimate.
result A Harnack inequality holds under the hybrid curvature-dimension condition CDhyb(0,d) with d<∞. Complex behaviour in many systems arises from the stochastic interactions of spatially distributed particles or agents. Stochastic reaction-diffusion processes are widely used to model such behaviour in disciplines ranging from biology to the social sciences, yet they are notoriously difficult to simulate and calibrate…
DEMOTE uses neural diffusion-reaction processes to capture temporal dynamics in sparse tensor data.
problem Sparse and temporally associated tensor data with limited structural knowledge.
method Develops a neural diffusion-reaction process to estimate dynamic embeddings for tensor modes.
result Captures both commonalities and personalities in evolving tensor entries.
This paper improves multi-label classification of user reactions in online news.
problem Classifying user reactions in online news with multi-label classification.
method Problem transformation methods combined with different classification algorithms.
result Classifier Chains method combined with Random Forest achieved the highest correct predictions.
Derives variance kernel for reaction boundary in financial models.
problem Separating components in financial volatility models.
method Operational-time variance kernel, damped Abel response kernel, closed asymptotic form.
result Operational variance has a closed asymptotic form involving various parameters.
Derives operational-time variance kernel for reaction boundaries in financial markets.
problem Separating components in volatility models to better understand market dynamics.
method Derives a variance kernel for a latent-order-book reaction boundary, separating structural boundary cumulant, clock projection, and pricing-measure choice.
result Operational variance has a closed asymptotic form for long-memory forcing, with effective signed-forcing intensity and resilience.
Machine learning models simulate molecular spectra and reactions in solvents.
problem Accurate simulation of molecular spectra and reactions in solvent environments.
method Introduced FieldSchNet, a deep neural network for modeling molecular interactions with external fields.
result Demonstrated significant lowering of Claisen rearrangement reaction activation barrier using FieldSchNet.
Adjoint SA speeds up bioprocess parameter learning.
problem Challenges in digital twin development for biomanufacturing.
method Adjoint sensitivity analysis on multi-scale enzymatic reaction networks.
result Resilient sensitivities reveal bioprocess regulatory mechanisms.