Increasing numbers of software vulnerabilities are discovered every year whether they are reported publicly or discovered internally in proprietary code. These vulnerabilities can pose serious risk of exploit and result in system compromise, information leaks, or denial of service. We leveraged the wealth of C and C++ …
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arXiv research
A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
168,786 papers · 148 categories
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48 results for “open source software”
Paper simplifies Gittins indices calculation for bandits.
problem Difficulty in calculating Gittins indices for multi-armed bandits.
method Accessible general methodology for calculating Gittins indices.
result Removes computation barrier for Gittins indices.
Graph-based ML improves defect prediction in software development.
problem Challenges in predicting defect-prone changes in complex software development.
method Building contribution graphs from developers and source files, using graph-based ML for defect prediction.
result Graph-based ML leads to significantly better defect prediction (F1 score up to 77.55%, MCC up to 53.16%).
Software helps teach latent variable methods in multivariate data analytics.
problem Challenges in understanding multivariate data analytics for students.
method Interactive software for comparing latent variable methods.
result Builds intuition on choosing methods and interpreting coefficients.
BoFire optimizes chemistry experiments using Bayesian Optimization.
problem Effective deployment of Bayesian Optimization in the chemical industry.
method Combines Bayesian Optimization with DoE strategies, providing a rich feature-set.
result BoFire enables seamless integration into RESTful APIs for real-world use.
Scoping review and benchmarking of synthetic EHR data generation methods.
problem Creating realistic synthetic electronic health records for research and training.
method Conducted a scoping review and benchmarked seven methods on open-source EHR datasets.
result GAN-based methods excel in fidelity and utility, while rule-based methods excel in privacy protection.
Descriptive comments play a crucial role in the software engineering process. They decrease development time, enable better bug detection, and facilitate the reuse of previously written code. However, comments are commonly the last of a software developer's priorities and are thus either insufficient or missing entirel…
We consider the problem of developing suitable learning representations (embeddings) for library packages that capture semantic similarity among libraries. Such representations are known to improve the performance of downstream learning tasks (e.g. classification) or applications such as contextual search and analogica…
FOSS is an acronym for Free and Open Source Software. The FOSS 2013 survey primarily targets FOSS contributors and relevant anonymized dataset is publicly available under CC by SA license. In this study, the dataset is analyzed from a critical perspective using statistical and clustering techniques (especially multiple…
This paper reviews forecast combinations over 50 years, highlighting their evolution and utility.
problem Improving forecast accuracy through combining multiple forecasts.
method Evolution of forecast combination methods, from simple to sophisticated.
result Forecast combinations have become a mainstream approach in forecasting.
Thousands of security vulnerabilities are discovered in production software each year, either reported publicly to the Common Vulnerabilities and Exposures database or discovered internally in proprietary code. Vulnerabilities often manifest themselves in subtle ways that are not obvious to code reviewers or the develo…
learn2learn simplifies meta-learning research by providing a library and standardized interfaces.
problem Prototyping and reproducibility issues in meta-learning.
method Developed a library (learn2learn) with common routines and standardized interfaces.
result Fosters a community around standardized software for meta-learning research.
The abundance of open-source code, coupled with the success of recent advances in deep learning for natural language processing, has given rise to a promising new application of machine learning to source code. In this work, we explore the use of a Siamese recurrent neural network model on Python source code to create …
HuSpaCy offers an industrial-grade Hungarian NLP toolkit.
problem Lack of suitable open-source Hungarian NLP pipelines.
method Built on spaCy, HuSpaCy includes lemmatization, morphosyntactic analysis, entity recognition, and word embeddings.
result HuSpaCy achieves high accuracy with resource-efficient prediction.
The AMIDST Toolbox is a software for scalable probabilistic machine learning with a spe- cial focus on (massive) streaming data. The toolbox supports a flexible modeling language based on probabilistic graphical models with latent variables and temporal dependencies. The specified models can be learnt from large data s…
The scientific literature is a rich source of information for data mining with conceptual knowledge graphs; the open science movement has enriched this literature with complementary source code that implements scientific models. To exploit this new resource, we construct a knowledge graph using unsupervised learning me…
SurvSet offers a repository of 76 T2E datasets for ML benchmarking.
problem Lack of open-source T2E dataset repositories for ML benchmarking.
method Consistent formatting of datasets for various ML algorithms and statistical methods.
result SurvSet provides a comprehensive resource for T2E analysis.
Paper develops multilingual job classification for ISCO and KZiS.
problem Classifying job advertisements for accurate occupation coding.
method Transformer architecture for hierarchical multi-class classification.
result Hierarchical structure improves prediction accuracy by 1-2 percentage points.
Bike usage in Smart Cities becomes paramount for sustainable urban development. Cycling provides tremendous opportunities for a more healthy lifestyle, lower energy consumption and carbon emissions as well as reduction of traffic jams. While the number of cyclists increase along with the expansion of bike sharing initi…
Introducing ReQuEST: an Open Platform for Reproducible and Quality-Efficient Systems-ML Tournamentsstat.ML
Co-designing efficient machine learning based systems across the whole hardware/software stack to trade off speed, accuracy, energy and costs is becoming extremely complex and time consuming. Researchers often struggle to evaluate and compare different published works across rapidly evolving software frameworks, hetero…
Cyanure: An Open-Source Toolbox for Empirical Risk Minimization for Python, C++, and soon morestat.ML
Cyanure offers efficient solvers for linear model learning in Python, C++, and more.
problem Efficiently solving empirical risk minimization problems for linear models.
method Stochastic variance-reduced optimization with acceleration mechanisms.
result Handles a wide range of loss and regularization functions.
Corporate bond factor research is flawed due to measurement errors and ex-post filtering.
problem Replication crisis in corporate bond factor research.
method Analysis of 108 signals across nine thematic clusters, correction of transaction prices and return filtering.
result Majority of previously documented factors do not produce statistically significant alphas after correction.
PyTorch Geometric Signed Directed fills the gap for GNNs on signed and directed graphs.
problem Lack of unified software packages for GNNs on signed and directed networks.
method Developed a software package with GNN models, synthetic and real-world data, and evaluation metrics.
result Demonstrates the effectiveness of the implemented methods through experiments.
We introduce \texttt{pycobra}, a Python library devoted to ensemble learning (regression and classification) and visualisation. Its main assets are the implementation of several ensemble learning algorithms, a flexible and generic interface to compare and blend any existing machine learning algorithm available in Pytho…
This thesis advances algorithms and software for QMC, GP, and sciML.
problem Efficient high-dimensional integration, interpolation, and PDE modeling.
method Developed new algorithms and software for QMC, GP, and sciML.
result Efficient and accurate methods for high-dimensional problems.
NoLimits.jl: Flexible and Composable Nonlinear Mixed-Effects Modeling in Julia
problem Flexible and composable nonlinear mixed-effects modeling
method Macro-based modeling language and unified interface
result Substantially expand the range of nonlinear mixed-effects models
Survey examines challenges and tools for integrating multiple types of omics data.
problem Integrating multiple types of omics data for healthcare applications.
method Categorizes fusion approaches, collects open-source tools, explores datasets.
result Identifies challenges and gaps in multimodal learning for multi-omics.
BayesPy is an open-source Python software package for performing variational Bayesian inference. It is based on the variational message passing framework and supports conjugate exponential family models. By removing the tedious task of implementing the variational Bayesian update equations, the user can construct model…
Each year, thousands of software vulnerabilities are discovered and reported to the public. Unpatched known vulnerabilities are a significant security risk. It is imperative that software vendors quickly provide patches once vulnerabilities are known and users quickly install those patches as soon as they are available…
Toolkit and taxonomy for diverse AI explainability methods.
problem Diverse stakeholder needs for AI explanations.
method Open-source software toolkit with eight explainability methods and evaluation metrics.
result Taxonomy helps navigate explanation methods.
PyPOTS simplifies machine learning on time series with missing data.
problem Handling missing data in time series analysis.
method Unified interface for imputation, forecasting, anomaly detection, classification, and clustering.
result Robust and scalable Python toolkit for multivariate partially-observed time series.
It is well known in astronomy that propagating non-Gaussian prediction uncertainty in photometric redshift estimates is key to reducing bias in downstream cosmological analyses. Similarly, likelihood-free inference approaches, which are beginning to emerge as a tool for cosmological analysis, require a characterization…
DADApy analyzes high-dimensional data manifolds in Python.
problem Analyzing complex, high-dimensional data.
method Estimating intrinsic dimension, density, clustering, comparing distance metrics.
result Effective analysis of data manifolds in Python.
OMLT combines ML and optimization for solving complex problems.
problem Solving complex decision-making problems in computer science and engineering.
method OMLT integrates neural networks and gradient-boosted trees into optimization problems using machine learning.
result OMLT seamlessly integrates with Pyomo and solves real-world problems.
We present in this paper experiments on Table Recognition in hand-written registry books. We first explain how the problem of row and column detection is modeled, and then compare two Machine Learning approaches (Conditional Random Field and Graph Convolutional Network) for detecting these table elements. Evaluation wa…
Motivated by the problem of automated repair of software vulnerabilities, we propose an adversarial learning approach that maps from one discrete source domain to another target domain without requiring paired labeled examples or source and target domains to be bijections. We demonstrate that the proposed adversarial l…
The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged within the human neuroimaging community. We discuss the range of open data sharing re…
New method detects malware through obfuscation using adversarial risk analysis.
problem Insufficient malware detection in obfuscated binaries.
method Hybrid framework and adversarial risk analysis.
result Improved detection of malware through obfuscation.
MLJ offers a Julia package for composing machine learning models.
problem Complex model composition in machine learning.
method Flexible model composition tools and meta-algorithms.
result Clear benefits of Julia over multi-language alternatives.
HiPart offers an efficient, interactive tool for hierarchical clustering.
problem Efficient and interpretable hierarchical clustering for Big Data.
method Divisive hierarchical clustering algorithms with interactive visualizations.
result High computational efficiency and interpretability in Big Data applications.
Devign uses graph neural networks to identify vulnerabilities efficiently.
problem Challenging and tedious process of identifying vulnerabilities in software systems.
method Devign employs a graph neural network to classify graph-level vulnerabilities using comprehensive code semantic representations.
result Devign significantly outperforms state-of-the-art models in vulnerability identification.
This paper documents the release of the ELKI data mining framework, version 0.7.5. ELKI is an open source (AGPLv3) data mining software written in Java. The focus of ELKI is research in algorithms, with an emphasis on unsupervised methods in cluster analysis and outlier detection. In order to achieve high performance a…
Pykg2vec is an open-source Python library for learning the representations of the entities and relations in knowledge graphs. Pykg2vec's flexible and modular software architecture currently implements 16 state-of-the-art knowledge graph embedding algorithms, and is designed to easily incorporate new algorithms. The goa…
Open dataset and pipeline for realistic OPE research.
problem Lack of realistic and reproducible OPE experimental studies.
method Public logged bandit dataset and Python software.
result Enables experimental comparisons of OPE estimators.
GPI uses GenAI models to infer causal and predictive effects from unstructured data.
problem Estimating causal and predictive effects from unstructured data like text and images.
method Leverages open-source GenAI models to generate and represent unstructured data, applying machine learning to these representations.
result GPI efficiently estimates causal and predictive effects with quantified uncertainty, without fine-tuning.
AMPL is a new software pipeline for drug discovery models.
problem Reproducibility and traceability in drug discovery models.
method Modular and extensible software pipeline for machine learning models.
result Physicochemical descriptors and deep learning outperform traditional fingerprints.
Numerical issues in maximum likelihood parameter estimation for Gaussian process interpolationstat.ML
Investigates numerical issues in GP interpolation parameter estimation.
problem Numerical issues in maximum likelihood parameter estimation for Gaussian process interpolation.
method Investigates and proposes strategies to improve open-source software implementations.
result Improves reliability and reproducibility of studies relying on GP implementations.
Multimodal deep learning improves flaw detection in software programs.
problem Current flaw detection relies on single software representations.
method Adapted multimodal deep learning models for flaw detection.
result Multimodal models outperform traditional deep learning models.