Despite advances in scalable models, the inference tools used for Gaussian processes (GPs) have yet to fully capitalize on developments in computing hardware. We present an efficient and general approach to GP inference based on Blackbox Matrix-Matrix multiplication (BBMM). BBMM inference uses a modified batched versio…
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48 results for “matrix inference”
This project compares MCMC and VI for Bayesian PMF on MovieLens.
problem Intractable posterior distribution in PMF.
method Employed MCMC and VI for Bayesian inference on MovieLens.
result VI converges faster, MCMC provides more accurate estimates.
NGD improves multivariate Gaussian inference by optimizing Fisher information.
problem Efficiently optimizing multivariate Gaussian models.
method Natural Gradient Descent applied to multivariate Gaussian parameters.
result NGD updates are more efficient for symmetric covariance matrices.
A new optimization algorithm for Gaussian Variational Inference on precision matrices.
problem Complex models with positive definite constraints on covariance matrices.
method Manifold Gaussian Variational Bayes (MGVBP) with natural gradient updates.
result Empirically validated as a feasible and efficient solution for VI in complex models.
New online method for statistical inference with matrix context in decision-making.
problem Statistical inference in decision-making with matrix context.
method Proposes a fully online procedure to conduct statistical inference with adaptive data collection, handling low-rank structure.
result Establishes asymptotic normality of debiased estimators and proves validity of confidence intervals.
New distribution simplifies covariance matrix inference.
problem Efficient inference for covariance matrices in large models.
method Incorporates Inverse G-Wishart distribution for variational message passing.
result Elegant and succinct expression of variational message passing fragments.
This text investigates relations between two well-known family of algorithms, matrix factorisations and recursive linear filters, by describing a probabilistic model in which approximate inference corresponds to a matrix factorisation algorithm. Using the probabilistic model, we derive a matrix factorisation algorithm …
The paper improves matrix completion with auxiliary covariates using LS estimation.
problem Matrix completion with noisy data and auxiliary covariates.
method Iterative least squares estimation with statistical properties derived.
result Asymptotic normal distributions of estimators for low-rank matrix and coefficient matrix.
Boolean matrix factorisation aims to decompose a binary data matrix into an approximate Boolean product of two low rank, binary matrices: one containing meaningful patterns, the other quantifying how the observations can be expressed as a combination of these patterns. We introduce the OrMachine, a probabilistic genera…
BLAST optimizes deep model inference by learning efficient matrix structures.
problem Efficient inference of large-scale deep neural networks.
method Introduces BLAST matrix for adaptive structured weights.
result Significant compression and performance improvements for various model sizes.
Statistical Inference for Matching Decisions via Matrix Completion under Dependent Missingnessstat.ME
The paper addresses statistical inference in matching markets with dependent missingness.
problem Statistical inference for two-sided matching markets with matching-induced dependence.
method Non-convex algorithm based on Grassmannian gradient descent, debiasing and projection framework.
result Near-optimal entrywise convergence rates for various matching mechanisms.
The paper infers multiple graphs from stationary signals on them.
problem Inferring multiple graphs from signals observed on their nodes.
method Convex optimization method leveraging matrix polynomial commutation.
result High-probability bounds on recovery error provided.
We consider the probabilistic analogue to neural network matrix factorization (Dziugaite & Roy, 2015), which we construct with Bayesian neural networks and fit with variational inference. We find that a linear model fit with variational inference can attain equivalent predictive performance to the regular neural networ…
We consider analysis of relational data (a matrix), in which the rows correspond to subjects (e.g., people) and the columns correspond to attributes. The elements of the matrix may be a mix of real and categorical. Each subject and attribute is characterized by a latent binary feature vector, and an inferred matrix map…
In this paper, we study the trade-offs of different inference approaches for Bayesian matrix factorisation methods, which are commonly used for predicting missing values, and for finding patterns in the data. In particular, we consider Bayesian nonnegative variants of matrix factorisation and tri-factorisation, and com…
Bayesian model infers factor dimensionality and sparse loading matrix adaptively.
problem Inference of high-dimensional sparse factor model with varying sparsity and factor dimensions.
method Adaptive Bayesian sparse factor model with posterior concentration.
result Posterior distribution asymptotically concentrates on true factor dimensionality and sparsity.
We introduce a flexible framework for making inferences about general linear forms of a large matrix based on noisy observations of a subset of its entries. In particular, under mild regularity conditions, we develop a universal procedure to construct asymptotically normal estimators of its linear forms through double-…
Method cleans covariance matrices for better statistical inference.
problem Reducing estimation noise in covariance matrices for better statistical inference.
method Robust yet flexible hierarchical ansatz with bootstrap procedure.
result Lower realized risk in global minimum variance portfolios.
New method for inferring network topology from partial data.
problem Inferring network topology from limited node data.
method Vector autoregressive model and Gaussian mixture algorithm.
result The proposed method converges to the network combination matrix in probability.
Develops a new MCMC-based Wishart prior for Gaussian Process covariance matrix.
problem Difficult inference for multivariate Gaussian Processes with multiple lengthscale parameters.
method Introduces a self-assembled Wishart prior and uses MCMC for Bayesian inference on kernel hyperparameters.
result Demonstrates the effectiveness of the new prior in GP-based learning with empirical results.
Study the distribution for low-rank matrix learning, improving inference methods.
problem Lack of understanding of underlying probability distributions in low-rank matrix learning.
method Analyze the distribution , using differential geometry to design an improved MCMC algorithm and learn penalty parameter λ.
result Improved MCMC algorithm and penalty parameter learning for low-rank Bayesian inference.
New method for inference on covariates in NMF with random effects.
problem Formal inference for covariate effects in NMF with non-negativity constraints.
method NMF-RE model with random effects, ridge updates, df-based cap, asymptotic linearization, wild bootstrap.
result Valid inference on covariates with non-negativity constraint, avoiding degeneracy.
PRISM identifies simplex vertices from noisy data.
problem Identifying vertices of a simplex from noisy data.
method Probabilistic simplex model with maximum likelihood inference.
result Vertices are identifiable under certain assumptions.
This paper considers inference over distributed linear Gaussian models using factor graphs and Gaussian belief propagation (BP). The distributed inference algorithm involves only local computation of the information matrix and of the mean vector, and message passing between neighbors. Under broad conditions, it is show…
Valid causal inference in observational studies often requires controlling for confounders. However, in practice measurements of confounders may be noisy, and can lead to biased estimates of causal effects. We show that we can reduce the bias caused by measurement noise using a large number of noisy measurements of the…
New method for faster graph parameter inference from large random Kronecker graphs.
problem Efficiently infer graph parameters from large random Kronecker graphs.
method Decompose adjacency matrix into signal and noise components, then use denoising and solving approach.
result Proposed method achieves comparable or better performance than existing methods at lower computational cost.
New method for community detection in graphs faster than DCBM inference.
problem Efficiently detecting communities in graphs with heterogeneous node degrees.
method Reformulated constrained nonnegative matrix factorization for DCBM inference.
result Faster community detection (4 minutes for 100k nodes vs. DCBM's 10+ minutes).
New statistical model improves protein alignment accuracy.
problem Improving accuracy in protein sequence alignment.
method Inferred a time-dependent Markov process from protein sequences.
result Developed a new optimal matrix (MMLSUM) for protein alignment.
Transfer knowledge from multiple sources to improve matrix completion.
problem Matrix completion with noisy data.
method Aggregating singular subspaces information from multiple sources to solve a two-way PCA problem and transform into a low-dimensional linear regression.
result Guaranteed statistical efficiency in transforming the high-dimensional target matrix completion problem.
Stein variational gradient descent (SVGD) is a particle-based inference algorithm that leverages gradient information for efficient approximate inference. In this work, we enhance SVGD by leveraging preconditioning matrices, such as the Hessian and Fisher information matrix, to incorporate geometric information into SV…
New method infers co-expression networks robustly from multiple studies.
problem Challenges in inferring co-expression networks from transcriptome data.
method Robust method based on multivariate t-distribution with shared precision matrix.
result Identifies co-expression matrix up to scaling factor.
Study analyzes Bayesian inference algorithms using dynamical functional approach.
problem Analysis of approximate inference algorithms for large Gaussian latent variable models.
method Dynamical functional approach to model nontrivial dependencies and obtain exact effective stochastic process.
result Closed-form expressions for the rate of convergence are derived and validated.
Transformers interpreted as probabilistic Laplacian Eigenmaps steps.
problem Improving transformer performance through probabilistic interpretation.
method Probabilistic Laplacian Eigenmaps model derivation and graph diffusion step.
result Subtracting identity from attention matrix improves transformer performance.
SKI accelerates GP inference with sparse grids to handle higher dimensions.
problem SKI scales poorly in high dimensions due to dense grid size.
method Sparse grids within SKI framework, novel matrix-vector multiplication algorithm.
result SKI can be scaled to higher dimensions while maintaining accuracy.
Study on signal recovery from low-rank matrix with sparse noise.
problem Inference of a rank-one signal in the presence of sparse noise.
method Replica method from statistical physics, recursive distributional equations, population dynamics algorithm.
result Critical signal strength for recovery via top eigenvector identified.
This paper presents a unified geometric framework for the statistical analysis of a general ill-posed linear inverse model which includes as special cases noisy compressed sensing, sign vector recovery, trace regression, orthogonal matrix estimation, and noisy matrix completion. We propose computationally feasible conv…
A new method for learning Bayesian neural networks using layerwise inference.
problem Learning Bayesian neural networks efficiently and accurately.
method Bayesian layerwise inference, treating neural networks as stacked Bayesian linear models, with pseudo-targets defined by backpropagated gradients.
result The method converges quickly and performs well on various benchmarks.
Gaussian graphical models are widely utilized to infer and visualize networks of dependencies between continuous variables. However, inferring the graph is difficult when the sample size is small compared to the number of variables. To reduce the number of parameters to estimate in the model, we propose a non-asymptoti…
New method infers graph from dependent matrix data.
problem Inferring graph from dependent matrix data.
method Sparse-group lasso-based frequency-domain formulation with ADMM approach.
result Local convergence of inverse PSD estimators to true value.
We introduce two methods for estimating the density matrix for a quantum system: Quantum Maximum Likelihood and Quantum Variational Inference. In these methods, we construct a variational family to model the density matrix of a mixed quantum state. We also introduce quantum flows, the quantum analog of normalizing flow…
High-dimensional inference for sparse spectral precision matrices
problem Inference on the spectral precision matrix at a fixed frequency
method Full likelihood-based inference using neighboring discrete Fourier transforms
result Simultaneous control of regularization, finite-sample truncation, and smoothing biases
Paper tackles small eigen-gap estimation and inference for noisy symmetric matrices.
problem Estimating eigenvectors with small eigen-gap and fine-grained statistical reasoning.
method Eigen-decomposition of asymmetric data matrix, distribution-free procedures, adaptive to heteroscedastic noise.
result Minimax optimal under Gaussian noise, confidence intervals for eigenvalues, small eigen-gap handling.
Non-negative Matrix Factorization (NMF) is a popular tool for data exploration. Bayesian NMF promises to also characterize uncertainty in the factorization. Unfortunately, current inference approaches such as MCMC mix slowly and tend to get stuck on single modes. We introduce a novel approach using rapidly-exploring ra…
We reframe linear dimensionality reduction as a problem of Bayesian inference on matrix manifolds. This natural paradigm extends the Bayesian framework to dimensionality reduction tasks in higher dimensions with simpler models at greater speeds. Here an orthogonal basis is treated as a single point on a manifold and is…
Training Gaussian process-based models typically involves an computational bottleneck due to inverting the covariance matrix. Popular methods for overcoming this matrix inversion problem cannot adequately model all types of latent functions, and are often not parallelizable. However, judicious choice of model…
Nonnegative Boltzmann machines (NNBMs) are recurrent probabilistic neural network models that can describe multi-modal nonnegative data. NNBMs form rectified Gaussian distributions that appear in biological neural network models, positive matrix factorization, nonnegative matrix factorization, and so on. In this paper,…
Noisy matrix completion aims at estimating a low-rank matrix given only partial and corrupted entries. Despite substantial progress in designing efficient estimation algorithms, it remains largely unclear how to assess the uncertainty of the obtained estimates and how to perform statistical inference on the unknown mat…
Beta process is the standard nonparametric Bayesian prior for latent factor model. In this paper, we derive a structured mean-field variational inference algorithm for a beta process non-negative matrix factorization (NMF) model with Poisson likelihood. Unlike the linear Gaussian model, which is well-studied in the non…