Efficient molecular optimization using probabilistic hypergraph grammars and reinforcement learning.
problem Optimizing molecular structures for better performance in various benchmarks.
method Inferred a hypergraph replacement grammar from ChEMBL, used conditional priors for policy model, and applied a modified policy gradient algorithm.
result The approach results in a molecular distribution closer to the training set than using equal or unconditional priors.
Molecular optimization aims to discover novel molecules with desirable properties. Two fundamental challenges are: (i) it is not trivial to generate valid molecules in a controllable way due to hard chemical constraints such as the valency conditions, and (ii) it is often costly to evaluate a property of a novel molecu…
New grammar model learns sentence structure with latent variables.
problem Grammar induction for sentences with complex dependencies.
method Compound probabilistic context-free grammar with latent variables, variational inference.
result Effective unsupervised parsing compared to state-of-the-art methods.
Probabilistic grammars improve equation discovery from data.
problem Discovering scientific laws from data using equations.
method Proposed probabilistic context-free grammars to encode soft constraints and a Monte-Carlo algorithm.
result Probabilistic grammars lead to more efficient equation discovery.
AG-RL uses action grammars to improve reinforcement learning efficiency.
problem Improving sample efficiency in reinforcement learning.
method Integrates action grammars into reinforcement learning algorithms to enhance performance.
result Significant improvement in performance across multiple Atari games.
Unified recurrent networks reveal differences in complexity levels of grammars.
problem Understanding the complexity and behavior of recurrent networks.
method Connecting recurrent networks with deterministic finite automata and formal grammars.
result Unified recurrent networks improve performance and match grammars from different complexity levels.
AlphaCFG discovers alpha factors using grammar-guided search.
problem Discovering formulaic alpha factors in finance.
method AlphaCFG uses a grammar-based framework to define and discover alpha factors with syntactic and semantic constraints.
result AlphaCFG outperforms state-of-the-art methods in trading profitability and efficiency.
Hypergraphs allow one to encode higher-order relationships in data and are thus a very flexible modeling tool. Current learning methods are either based on approximations of the hypergraphs via graphs or on tensor methods which are only applicable under special conditions. In this paper, we present a new learning frame…
Study compares hypergraph and graph-level models for higher-order relational learning.
problem Evaluating effectiveness of hypergraph-level vs. graph-level models in relational learning.
method Systematic evaluation of various hypergraph and graph-level architectures.
result Graph-level models applied to hypergraph expansions outperform hypergraph-level models.
Develops a Markov Random Field model for hypergraphs to improve machine learning tasks.
problem Modeling data generation processes on hypergraphs for better machine learning.
method Hypergraph Markov Random Field model using multivariate Gaussian distribution.
result Proposed model enhances algorithm design and outperforms existing methods in structure inference and node classification.
HyperBERT enhances BERT for node classification on text-attributed hypergraphs.
problem Challenges in capturing hypergraph structure and text attributes in node classification.
method Mixing hypergraph-aware layers with BERT for improved node classification.
result HyperBERT achieves state-of-the-art results on text-attributed hypergraph benchmarks.
A new hypergraph expansion method treats vertices and hyperedges equally, improving node classification.
problem Information loss in hypergraph expansions on either vertex or hyperedge level.
method Proposes a new hypergraph formulation named line expansion (LE) that treats vertices and hyperedges symmetrically.
result The proposed line expansion method outperforms state-of-the-art baselines on five hypergraph datasets.
Extends graph theory to hypergraphs with manifold-valued nodes.
problem Representing complex N-ary relationships on manifolds.
method Defined function spaces and symmetric products for manifold-valued nodes and edges.
result Generalized hypergraph Laplacians to manifold-valued hypergraphs.
The graph Laplacian plays key roles in information processing of relational data, and has analogies with the Laplacian in differential geometry. In this paper, we generalize the analogy between graph Laplacian and differential geometry to the hypergraph setting, and propose a novel hypergraph p-Laplacian. Unlike the …
Future predictions on sequence data (e.g., videos or audios) require the algorithms to capture non-Markovian and compositional properties of high-level semantics. Context-free grammars are natural choices to capture such properties, but traditional grammar parsers (e.g., Earley parser) only take symbolic sentences as i…
The paper develops a spectral theory for hypergraphs with edge-dependent vertex weights using random walks.
problem Lack of spectral theory for hypergraphs with edge-dependent vertex weights.
method Random walks on hypergraphs with edge-dependent vertex weights, deriving a random walk-based hypergraph Laplacian.
result Random walks on hypergraphs with edge-dependent vertex weights can capture higher-order relationships in data.
Paper introduces a noise-robust classification method using hypergraph neural networks.
problem Noisy label learning problem in image datasets.
method PCA for dimensionality reduction, then applies graph-based semi-supervised learning methods including hypergraph neural network.
result Our proposed hypergraph neural network achieves the best performance when noise level increases.
We propose a new statistical model for computational linguistics. Rather than trying to estimate directly the probability distribution of a random sentence of the language, we define a Markov chain on finite sets of sentences with many finite recurrent communicating classes and define our language model as the invarian…
New method detects communities in hypergraphs by embedding them into a vector space.
problem Detecting communities in hypergraphs with multi-way interactions.
method Augmenting non-uniform hypergraphs, embedding into a vector space, using an alternative updating scheme.
result Asymptotic consistencies in community detection and hypergraph estimation established.
Perfect clustering achieved in hypergraphs with enough interactions.
problem Complexity and lack of tractable models for analyzing hypergraphs.
method Introduced an interaction hypergraph model for analyzing hypergraphs, defined latent embeddings, and analyzed spectral estimators.
result A spectral estimate of interaction latent positions can achieve perfect clustering with enough interactions.
Codebook for Institutional Grammar 2.0 simplifies policy encoding.
problem Facilitating consistent policy encoding for diverse analytical needs.
method Revised Institutional Grammar with multiple levels of expressiveness.
result Enhanced flexibility and specificity in policy encoding.
Recently, graph neural networks have attracted great attention and achieved prominent performance in various research fields. Most of those algorithms have assumed pairwise relationships of objects of interest. However, in many real applications, the relationships between objects are in higher-order, beyond a pairwise …
Develops PageRank for directed hypergraphs using metabolic network.
problem Lack of directed hypergraph datasets for PageRank algorithm.
method Developed PageRank algorithm for directed hypergraphs and applied it to metabolic network.
result Successfully applied novel PageRank algorithm to metabolic network.
A novel hypergraph partitioning method using tensor eigenvalue decomposition captures super-dyadic interactions.
problem Capturing super-dyadic interactions in k-uniform hypergraphs.
method Tensor-based representation and tensor eigenvalue decomposition for capturing interactions.
result Improved min-cut solution on 2-uniform hypergraphs (graphs) compared to standard spectral partitioning.
Unified LLY Ricci curvature defined for hypergraphs.
problem Defining Ricci curvature for hypergraphs.
method Unified framework for LLY Ricci curvature on hypergraphs, establishing bounds and proving properties.
result Bonnet-Myers-type theorem for hypergraphs, highlighting curvature's potential in hypergraph analysis.
Paper learns hypergraph structures from signals with smoothness priors.
problem Learning hypergraph structures from signals with high-order relationships.
method Proposes HGSL framework with dual smoothness prior to map signals to hypergraph structure.
result HGSL efficiently infers meaningful hypergraph topologies from signals.
The task of translating between programming languages differs from the challenge of translating natural languages in that programming languages are designed with a far more rigid set of structural and grammatical rules. Previous work has used a tree-to-tree encoder/decoder model to take advantage of the inherent tree s…
Develops neural network for directed hypergraphs for node classification.
problem Irregular data structure, particularly directed graphs.
method Directed hypergraph neural network and semi-supervised learning method.
result Novel directed hypergraph neural network achieves highest accuracies on node classification tasks.
In many real-world network datasets such as co-authorship, co-citation, email communication, etc., relationships are complex and go beyond pairwise. Hypergraphs provide a flexible and natural modeling tool to model such complex relationships. The obvious existence of such complex relationships in many real-world networ…
We consider the community detection problem in sparse random hypergraphs. Angelini et al. (2015) conjectured the existence of a sharp threshold on model parameters for community detection in sparse hypergraphs generated by a hypergraph stochastic block model. We solve the positive part of the conjecture for the case of…
Derives a Matern Gaussian process on hypergraphs for regression and embedding.
problem Regression and embedding of vertices in hypergraphs with uncertainty.
method Derives a Matern Gaussian process on hypergraphs, embeds vertices into latent space, identifies inducing vertices for scalable inference.
result Enables estimation of regression models with hypergraph structure informed correlation and uncertainty.
Study information limits for community detection in sub-hypergraphs.
problem Identify limits for exact community detection in sub-hypergraphs.
method Use Fano's inequality to define model parameters and identify success and failure regions.
result Identify regions where algorithms succeed or fail in exact recovery.
The study connects hypergraphs to strong homotopy Lie algebras.
problem Characterizing hypergraphs with a system of distinct representatives.
method Describing a procedure to attach nilpotent strong homotopy Lie algebras to hypergraphs.
result Isomorphic hypergraphs correspond to isomorphic strong homotopy Lie algebras.
New method clusters hypergraphs using weighted random walks and Laplacians.
problem Clustering hypergraph data with edge-dependent weights.
method Random walks with edge-dependent vertex weights, constructing hypergraph Laplacians for clustering.
result Proposed methods outperform existing hypergraph clustering algorithms.
Proposes a method to train neural networks directly on compressed text data.
problem Training neural networks on compressed text data without decompression.
method Introduces composer modules to encode symbols from grammar compression rules into vector representations.
result Demonstrates that the proposed method can achieve both memory and computational efficiency while maintaining moderate performance.
Improved AutoML performance with a pipeline grammar and pre-trained model.
problem Automatic machine learning by pipeline synthesis.
method Model-based reinforcement learning and pipeline grammar.
result Improved performance on AutoML benchmark datasets.
HNHN learns from hypergraphs with hyperedge neurons for better classification.
problem Learning from hypergraphs with complex relationships.
method Hypergraph convolution network with hyperedge neurons and adaptive normalization.
result Improved classification accuracy and speed compared to state-of-the-art methods.
We propose a new method to model multi-way similarities into hypergraphs for clustering.
problem Clustering real-valued data using hypergraphs with multi-way similarities.
method Formulate multi-way similarities using kernel functions, establish connections to hypergraph cut, and develop a fast spectral clustering algorithm.
result Our method outperforms existing graph and heuristic modeling methods in clustering performance.
New hypergraph neural network learns variable-sized hyperedges.
problem Learning representations for non-uniform hypergraphs with variable cardinalities.
method Developed a hypergraph neural network exploiting incidence structure.
result Significant improvement in accuracy on real-world hypergraph datasets.
HYVINT generates hypergraphs with intensity-driven incidence formation and variational learning.
problem Challenges in generating hypergraphs with mechanistic interpretation and limited latent space.
method HYVINT uses intensity-driven incidence formation and a lower-bound variational estimator for latent representations.
result HYVINT achieves strong fidelity and novelty on synthetic and real-world hypergraphs.
Two randomized algorithms improve hypergraph learning accuracy and efficiency.
problem Efficiently learning and tagging images in hypergraphs.
method Block randomized SVD and conjugate gradient method.
result Both methods achieve high accuracy and reduce computational requirements.
HLRC offers a new curvature metric for hypergraphs that balances interpretability and efficiency.
problem Challenges in geometric characterization of hypergraphs with higher-order interactions.
method Hypergraph lower Ricci curvature (HLRC) defined in closed form.
result HLRC consistently reveals meaningful higher-order organization in diverse hypergraph datasets.
Hypergraph partitioning lies at the heart of a number of problems in machine learning and network sciences. Many algorithms for hypergraph partitioning have been proposed that extend standard approaches for graph partitioning to the case of hypergraphs. However, theoretical aspects of such methods have seldom received …
Study evaluates methods for expanding communities in hypergraphs using random walks.
problem Expanding communities in hypergraphs using random walks.
method Clique-expansion and tensor methods evaluated; hybrid method proposed.
result Parameter regimes identified where methods outperform each other.
Unified curvature for hypergraphs from Ollivier-Ricci.
problem Generalizing curvature to hypergraphs.
method Developed ORCHID framework to generalize Ollivier-Ricci curvature to hypergraphs.
result ORCHID curvatures have favorable theoretical properties and are scalable for hypergraph tasks.
HyperSAGE learns node representations in hypergraphs without losing information.
problem Learning node representations in hypergraphs is complex due to higher-order relations.
method Two-level neural message passing strategy for accurate information propagation.
result HyperSAGE outperforms state-of-the-art methods on benchmark datasets.
New topological methods for hypergraph data improve community detection and pattern recognition.
problem Community detection and pattern recognition in hypergraph data.
method Introducing a new topological space structure of hypergraph data, proposing modified nearest neighbors methods.
result Improved methods for community detection and pattern recognition in hypergraph data.
New method uses Ricci curvature for hypergraph clustering, outperforming existing techniques.
problem Community detection in hypergraphs with large hyperedges.
method Extending Ricci flow to hypergraphs by defining edge probability measures and transporting them on the line expansion.
result Enhanced sensitivity to hypergraph structure, especially in large hyperedges.