arXiv research

New models found for guts of nearly fibered knots.

Guts determine the leading coefficients of $L^2$-Alexander torsions for 3-manifolds.

Invariants for 3-manifolds with toral boundaries, related by sutured decompositions.

For a hyperbolic $3$-orbifold with underlying space the $3$-sphere, we obtain a lower bound on its volume in the case that it contains an essential $2$-suborbifold with underlying space the $2$-sphere with four cone points. Our techniques involve computing the guts of the orbifold split along the $2$-suborbifold via a …

Let M be a hyperbolic manifold of finite volume which fibers over the circle with fiber a once punctured torus, and let S be an arbitrary incompressible surface in M. We determine the characteristic JSJ-subpair of M-S and show, in particular, that the guts of (M,S) is empty.

Researchers found the minimum volume of a 3-cusped hyperbolic 3-manifold.

Modified proof for a broader class of links.

The tremendous boost in the next generation sequencing and in the omics technologies makes it possible to characterize human gut microbiome (the collective genomes of the microbial community that reside in our gastrointestinal tract). While some of these microorganisms are considered as essential regulators of our immu…

Study handles in sutured manifolds and knots, finding varied handle numbers and unique surfaces.

New geometric approach for analyzing compositional data like gut microbiomes.

We introduce a new method for estimating the support size of an unknown distribution which provably matches the performance bounds of the state-of-the-art techniques in the area and outperforms them in practice. In particular, we present both theoretical and computer simulation results that illustrate the utility and p…

Generative model identifies temporal count data components with regime-dependent contributions.

We give a general lower bound for the normal Gromov norm of genuine laminations in terms of the topology of the complementary regions. In the special case of 3-manifolds, this yields a generalization of Agol's inequality from incompressible surfaces to tight laminations. In particular, the inequality excludes the exist…

Paper tackles multi-source domain adaptation for regression.

Convolutional Neural Networks (CNNs) are a popular deep learning architecture widely applied in different domains, in particular in classifying over images, for which the concept of convolution with a filter comes naturally. Unfortunately, the requirement of a distance (or, at least, of a neighbourhood function) in the…

Hierarchical CNNs improve diagnosis of GI diseases from histopathological images.

We prove a finiteness result for the $\partial$-patterned guts decomposition of all 3-manifolds obtained by splitting a given orientable, irreducible and $\partial$-irreducible 3-manifold along a closed incompressible surface. Then using the Thurston norm, we deduce that the JSJ-pieces of all 3-manifolds dominated by a…

Compositional data have two unique characteristics compared to typical multivariate data: the observed values are nonnegative and their summand is exactly one. To reflect these characteristics, a specific regularized regression model with linear constraints is commonly used. However, linear constraints incur additional…

We show that if M is a complete, finite-volume, hyperbolic 3-manifold having exactly one cusp, and if H_1(M;Z_2) has dimension at least 6, then M has volume greater than 5.06. We also show that if M is a closed, orientable hyperbolic 3-manifold such that H_1(M;Z_2) has dimension at least 4, and if the image of the cup …

We construct a class of stable SU(5) bundles on an elliptically fibered Calabi-Yau threefold with two sections, a variant of the ordinary Weierstrass fibration, which admits a free involution. The bundles are invariant under the involution, solve the topological constraint imposed by the heterotic anomaly equation and …

In arXiv:1008.1018 it is shown that a given stable vector bundle $V$ on a Calabi-Yau threefold $X$ which satisfies $c_2(X)=c_2(V)$ can be deformed to a solution of the Strominger system and the equations of motion of heterotic string theory. In this note we extend this result to the polystable case and construct explic…

If M is an atoroidal 3-manifold with a taut foliation, Thurston showed that pi_1(M) acts on a circle. Here, we show that some other classes of essential laminations also give rise to actions on circles. In particular, we show this for tight essential laminations with solid torus guts. We also show that pseudo-Anosov fl…

Study links in 3-manifolds, linking volume to polynomial coefficients.

This paper addresses measurement errors in high-dimensional compositional data using a log-contrast model calibration approach.

Paper uses time series transformers to predict investment success.

Proposes a convex method to estimate GGMs with covariates.

CARE method estimates precision matrix for compositional data, achieving optimality in high dimensions.

Many complex ecosystems, such as those formed by multiple microbial taxa, involve intricate interactions amongst various sub-communities. The most basic relationships are frequently modeled as co-occurrence networks in which the nodes represent the various players in the community and the weighted edges encode levels o…

Paper introduces MGLasso for multiscale graph inference in clustering and network analysis.

Tree-based variational inference improves PLN model for hierarchical count data.

A new metric evaluates generative models by comparing real and generated samples.

This monograph derives direct and concrete relations between colored Jones polynomials and the topology of incompressible spanning surfaces in knot and link complements. Under mild diagrammatic hypotheses that arise naturally in the study of knot polynomial invariants (A- or B-adequacy), we prove that the growth of the…

Microbes are everywhere, including in and on our bodies, and have been shown to play key roles in a variety of prevalent human diseases. Consequently, there has been intense interest in the design of bacteriotherapies or "bugs as drugs," which are communities of bacteria administered to patients for specific therapeuti…