We consider the problem of signal recovery on graphs as graphs model data with complex structure as signals on a graph. Graph signal recovery implies recovery of one or multiple smooth graph signals from noisy, corrupted, or incomplete measurements. We propose a graph signal model and formulate signal recovery as a cor…
Revises GNN neighborhood aggregation for more accurate node classification.
problem Flaws in benchmark GNN models for node classification.
method Statistical signal processing approach to neighborhood aggregation.
result Novel insights for designing more efficient GNN models.
Graph classification improved using spectral features and wavelet filters.
problem Categorizing graphs based on their structure and node attributes.
method Derived spectral features from graph signal processing, designed two Gaussian process models: one simple and one sophisticated.
result Simple and sophisticated Gaussian process models yield competitive performance, including well-calibrated uncertainty estimates.
Paper generalizes GCNNs using edge-variant recursions for better graph signal classification.
problem Improving graph signal classification performance.
method Formulates a general framework for GCNNs using edge-variant graph filters.
result Shows superior performance in graph signal classification problems.
Researchers create benchmarks to compare graph inference methods.
problem Comparing graph inference methods is difficult due to varying downstream tasks.
method Developed benchmarks for various graph tasks.
result Contrasted prominent graph inference techniques.
End-to-end neural network extracts graph structure from EEG signals for improved emotional video classification.
problem Challenges in achieving accurate EEG classification for emotional video analysis.
method Proposes an end-to-end neural network model that learns an appropriate multi-layer graph structure from raw EEG signals.
result Improves performance in emotional video classification compared to manually defined connectivity structures.
Machine learning predicts signaling peptides from protein star graphs.
problem Predicting signaling activity of proteins from molecular structure.
method Protein star graphs, S2SNet topological indices, Machine Learning (SVM-RFE, Laplacian kernel).
result Best model predicts 98.0% signaling pathways with AUROC 0.961.
Graph Signal Processing (GSP) is a promising framework to analyze multi-dimensional neuroimaging datasets, while taking into account both the spatial and functional dependencies between brain signals. In the present work, we apply dimensionality reduction techniques based on graph representations of the brain to decode…
Graph learning method improves brain state classification.
problem Classifying brain states from iEEG signals.
method Representation learning on graphs for time-varying brain networks.
result 9.13% improvement in AUC for seizure vs. non-seizure classification.
Optimal graph classification uses message-passing neural networks.
problem Node classification on sparse graphs with fixed feature dimensions.
method Asymptotic local Bayes optimality, message-passing graph neural networks.
result Optimal message-passing architecture interpolates between MLP and convolution.
A new method classifies signals on irregular domains using convolutional cluster pooling.
problem Classifying signals on irregular domains with shared properties.
method Convolutional Cluster Pooling layer exploiting multi-scale clustering.
result Generalizes CNNs for graph data, capturing both local and global patterns.
BankGCN improves graph convolution networks by handling multi-channel signals with adaptive filter banks.
problem Handling multi-channel graph signals with limited architectures.
method BankGCN decomposes multi-channel signals into subspaces and uses adapted filters for each subspace.
result BankGCN achieves excellent performance in graph classification on benchmark datasets.
Graph-Dictionary model for sparse multivariate signal representation.
problem Capturing complex relational information in multivariate signals.
method Graph dictionaries and bilinear primal-dual splitting algorithm.
result Graph-dictionary model outperforms baselines in signal reconstruction and classification.
MPNNs struggle with class-bottlenecks and heterophily, leading to performance limitations.
problem Performance limitations of MPNNs under heterophily and structural bottlenecks.
method A statistical framework decomposing model performance into SNR components and proving bounds on sensitivity.
result Optimal graph structures for maximizing higher-order homophily are disjoint unions of single-class and two-class-bipartite clusters.
New network learns image features inductively for disease classification.
problem Pre-processing image features limits network optimization.
method Inductive end-to-end learning with CNN and graph filters trained jointly.
result Significantly improved classification scores and higher stability.
This paper explains GNNs using graph signal denoising.
problem Understanding how GNNs work for node representation learning.
method Spectral graph convolutional networks and graph attention networks are analyzed from the perspective of graph signal denoising.
result GNNs implicitly solve graph signal denoising problems.
In sparse signal representation, the choice of a dictionary often involves a tradeoff between two desirable properties -- the ability to adapt to specific signal data and a fast implementation of the dictionary. To sparsely represent signals residing on weighted graphs, an additional design challenge is to incorporate …
This study improves graph signal denoising for vector-valued data with non-convex penalties.
problem Denoising piecewise smooth graph signals with varying smoothness levels.
method Extended graph trend filtering with non-convex penalties and ADMM algorithm.
result Non-convex penalties outperform convex ones in recovery performance.
Graph Denoising Policy Network learns robust representations from noisy graphs.
problem Noise sensitivity in graph representation learning.
method Reinforcement learning to select signal neighborhoods and aggregate features.
result Significantly outperforms state-of-the-art methods on node classification tasks.
Proposes a new graph trend filtering model for inhomogeneous graph signals.
problem Estimating piecewise smooth signals over a graph with varying smoothness levels.
method Introduces a l2,0 norm penalized Graph Trend Filtering (GTF) model and two solution methods: spectral decomposition and simulated annealing.
result The GTF model performs better than existing approaches in denoising, support recovery, and semi-supervised classification.
A novel optimal transport framework for graph comparison.
problem Comparing graphs while considering their global structure.
method Optimal transport, graph Laplacian, probabilistic graph signals, Bayesian exploration.
result Our method significantly improves graph alignment and classification tasks.
Graph neural networks are found to be primarily low-pass filters, not manifold learners.
problem Improving performance and scalability of graph neural networks for graph-structured data.
method Developed a theoretical framework based on graph signal processing.
result Graph neural networks only perform low-pass filtering on feature vectors and do not have non-linear manifold learning property.
Spectro-Riemannian Graph Neural Networks integrate spectral and curvature signals for better graph representation learning.
problem Enhance graph representation learning by leveraging spectral and curvature signals.
method Proposes Spectro-Riemannian Graph Neural Networks (CUSP) that combines spectral and curvature insights.
result Empirical evaluation shows CUSP outperforms state-of-the-art models by up to 5.3%.
Proposes an offline active learning method for graphs.
problem Active learning on graphs where labeling is expensive.
method Two-stage biased sampling strategy considering informativeness and representativeness.
result Establishes a theoretical relationship between generalization error and number of nodes selected.
New graph coarsening method preserves GNN message-passing signals.
problem Preserving GNN message-passing on coarsened graphs.
method Proposed a new oriented message-passing operation for coarsened graphs.
result Improved node classification results compared to naive methods.
New MHSNs extract multiscale features from complex data for robust classification.
problem Signal classification and domain classification on complex data.
method Layered structure with multiscale basis dictionaries, pooling operations, and invariant features.
result High-accuracy classification with fewer parameters than traditional graph neural networks.
A novel method for comparing graphs of different sizes using Wasserstein distance.
problem Comparing non-aligned graphs of varying sizes.
method Optimal transport in graph comparison framework, solving a one-to-many assignment problem.
result Significant improvements in graph alignment and classification tasks.
We propose a novel framework for graph mean computation.
problem Defining a mean for graph data is difficult.
method Embeddings in the space of smooth graph signal distributions, using the Wasserstein metric.
result Existence and uniqueness of the graph mean established, and an iterative algorithm provided.
Graph neural networks perform better with more features and training data.
problem Comparing graph neural networks to simple models in semi-supervised node classification.
method Empirical evaluation of graph neural network architectures in various settings.
result More complex graph networks outperform simple models in settings with fewer features and more training data.
Two architectures that generalize convolutional neural networks (CNNs) for the processing of signals supported on graphs are introduced. We start with the selection graph neural network (GNN), which replaces linear time invariant filters with linear shift invariant graph filters to generate convolutional features and r…
Tasks involving the analysis of geometric (graph- and manifold-structured) data have recently gained prominence in the machine learning community, giving birth to a rapidly developing field of geometric deep learning. In this work, we leverage graph neural networks to improve signal detection in the IceCube neutrino ob…
COPT optimizes graph distances via simultaneous optimal transport.
problem Learning graph representations unsupervisedly.
method Simultaneous optimization of dual transport plans between vertices and graph signals.
result COPT preserves spectral information and outperforms state-of-the-art methods.
Popular graph neural networks implement convolution operations on graphs based on polynomial spectral filters. In this paper, we propose a novel graph convolutional layer inspired by the auto-regressive moving average (ARMA) filter that, compared to polynomial ones, provides a more flexible frequency response, is more …
Inductive graph-based approach for disease classification with incomplete data.
problem Classifying patients with incomplete multi-modal data.
method Multi-modal graph fusion trained end-to-end for node-level classification.
result Outperforms single static graph approach in multi-modal disease classification.
Active graph-based semi-supervised learning (AG-SSL) aims to select a small set of labeled examples and utilize their graph-based relation to other unlabeled examples to aid in machine learning tasks. It is also closely related to the sampling theory in graph signal processing. In this paper, we revisit the original fo…
Proposes a novel graph signal model using narrowband kernels.
problem Graph signals with multiple concentrated frequency regions.
method Jointly learns graph signal model parameters and coefficients.
result Joint learning improves signal interpolation accuracy.
BGNN improves GNN by modeling interactions between neighbor nodes.
problem Existing GNN models fail to capture interactions between neighbor nodes, leading to suboptimal performance.
method Proposes a new graph convolution operator that augments the weighted sum with pairwise interactions of neighbor nodes.
result Empirical results show BGNN models outperform traditional GNN models in node classification accuracy.
This paper reconstructs complex graph signals using kernel methods on manifolds.
problem Reconstructing complex graph signals from samples on graph vertices.
method Kernel methods on complex manifolds, embedding vertices into higher-dimensional spaces.
result Effective reconstruction of complex graph signals, outperforming conventional methods.
New framework models graph signals as distribution-valued signals in Wasserstein space.
problem Limitations of classical vector-based GSP, including synchronous observations and uncertainty.
method Introduces graph distribution-valued signals (GDSs) in the Wasserstein space.
result GDSs naturally encode uncertainty and stochasticity, generalizing traditional graph signals.
MGMC method handles missing data in medical datasets for accurate disease classification.
problem Handling missing data in incomplete medical datasets for accurate disease classification.
method Multigraph Geometric Matrix Completion (MGMC) using multiple graph convolutional networks.
result MGMC achieves superior classification and imputation performance compared to state-of-the-art approaches.
Graph embedding improves fMRI classification and reveals brain region differences in ASD.
problem Difficult to embed informative brain fMRI representations due to high dimensionality and low SNR.
method Modelled fMRI as a graph, used GNN to learn from graph data, incorporated mutual information loss (Infomax).
result Infomax graph embedding improves classification performance and reveals separable nodal representations of ASD and HC groups.
The construction of a meaningful graph plays a crucial role in the success of many graph-based representations and algorithms for handling structured data, especially in the emerging field of graph signal processing. However, a meaningful graph is not always readily available from the data, nor easy to define depending…
New method selects diffusion scales for graph wavelets.
problem Choosing optimal diffusion scales for graph wavelets.
method Proposes an unsupervised method using information theory.
result Method selects diffusion scales for graph wavelets.
Localized signal representation on graph bundles using Fourier analysis.
problem Representing signals on graph bundles with twists.
method Partition of unity and product factorization over the base graph.
result Lifted bases for signal spaces of graph bundle components.
Proposes a novel graph learning framework for robust graph topology learning from graph signals.
problem Graph learning for revealing node relationships in data entities.
method Functional learning with smoothness-promoting graph learning, incorporating Kronecker product kernel.
result Improves robustness against missing and incomplete information in graph signals.
New method for testing directed graphs using surrogate data.
problem No established method for statistical testing on directed graphs.
method Define directed graph wide-sense stationary signals, generate surrogates preserving covariance, construct null distributions.
result Feasibility and superiority of new approach over existing methods.
Proposes methods to recover labels from shuffled networks using graph averages.
problem Recovering labels from a shuffled network using graph averages.
method Cluster networks into classes, then match the new graph to cluster-averages, minimizing the graph matching objective function.
result Higher fidelity matching performance when clustering networks into different classes.
Combining brain structure and function for ASD diagnosis.
problem Identifying neuropathological bases of Autism Spectrum Disorder.
method Modeling brain structure as a graph, using rs-fMRI signals, and applying Graph Signal Processing.
result Decision tree outperforms state-of-the-art methods in diagnosing ASD.