New method selects diffusion scales for graph wavelets.
problem Choosing optimal diffusion scales for graph wavelets.
method Proposes an unsupervised method using information theory.
result Method selects diffusion scales for graph wavelets.
Graph Beta Diffusion (GBD) generates graphs with mixed discrete and continuous components.
problem Generating graphs with mixed discrete and continuous components.
method Introduces Graph Beta Diffusion (GBD) using a beta diffusion process.
result Competes strongly with existing models across graph benchmarks.
New model learns graph spectra accurately, outperforming existing methods.
problem Graph diffusion models struggle to distinguish certain graph families and their spectra.
method Leveraged random matrix theory to analytically extract spectral properties, introducing Dyson Diffusion Model.
result Dyson Diffusion Model learns graph spectra accurately and outperforms existing models.
Classifies solitons for surface diffusion flow of graphs.
problem Classifying solitons for surface diffusion flow of graphs.
method Classifies solitons including equilibria, self-similar solutions, and travelling waves.
result Classified solitons for surface diffusion flow of entire graphs.
A new graph generator uses heat diffusion on graph Laplacians to create new graph structures.
problem Creating realistic and diverse graph structures for various applications.
method Adapting the Generator Matching paradigm to graph data, using graph Laplacian and heat kernel for diffusion.
result The method effectively generates graphs with structural properties of real and synthetic graphs.
This research explores how different discrete diffusion kernels affect graph generation quality.
problem The impact of different discrete diffusion kernels on graph generation quality.
method Developed a family of discrete diffusion kernels that converge to different Bernoulli priors.
result The quality of generated graphs is sensitive to the prior used, challenging previous intuitions.
DiPhon generates scalable graphs via diffusion on graphons.
problem Scaling diffusion models to large graphs.
method Formulated a continuous diffusion process on graphon space via Jacobi SDE, discretized for finite graphs.
result DiPhon matches the first moment of graphon dynamics and approximates the second moment.
PARD generates graphs efficiently and invariantly to node ordering.
problem Graph generation sensitivity to node ordering.
method Integrates autoregressive and diffusion models with a partial order for nodes and edges.
result PARD achieves state-of-the-art performance on molecular and non-molecular datasets.
GRAND treats GNNs as PDE discretizations, addressing graph learning issues.
problem Graph learning issues like depth, oversmoothing, and bottlenecks.
method Models GNNs as a continuous diffusion process, treating them as PDE discretizations.
result Linear and nonlinear versions of GRAND achieve competitive results on graph benchmarks.
The paper compares PINN methods for solving drift-diffusion equations on metric graphs.
problem Solving drift-diffusion equations on metric graphs using machine learning.
method Comparison of physics-informed neural networks (PINNs) for solving drift-diffusion equations on metric graphs.
result PINNs offer a flexible and versatile tool for solving parameter identification or optimization problems on metric graphs.
Fairness-aware diffusion for graph neural networks
problem Fairness in graph neural networks
method Adapting diffusion process with fairness-aware modifications
result Improves fairness metrics with minimal additional cost
Improved graph neural network bounds using graph diffusion matrix.
problem Empirical performance of graph neural networks on real-world graphs.
method Unified model of graph neural networks, focusing on feature diffusion matrix stability.
result Generalization bounds scale with largest singular value of feature diffusion matrix, smaller than prior bounds.
A new diffusion model encodes causal structures for better interventional sampling and edge inference.
problem Lack of causal analysis in standard diffusion models.
method Causality-encoded diffusion framework that trains conditional models consistent with a directed acyclic graph.
result The method enables accurate interventional sampling and edge inference, with theoretical guarantees and practical applications.
Diffuse interface methods have recently been introduced for the task of semi-supervised learning. The underlying model is well-known in materials science but was extended to graphs using a Ginzburg--Landau functional and the graph Laplacian. We here generalize the previously proposed model by a non-smooth potential fun…
Proposes graph neural network layers for manifold-valued graphs.
problem Graphs with features in a Riemannian manifold.
method Diffusion layer and tangent multilayer perceptron.
result Outperforms state-of-the-art networks on Alzheimer's classification.
Graph convolution is the core of most Graph Neural Networks (GNNs) and usually approximated by message passing between direct (one-hop) neighbors. In this work, we remove the restriction of using only the direct neighbors by introducing a powerful, yet spatially localized graph convolution: Graph diffusion convolution …
ParPIC clusters directed graphs using random walks and diffusion operators.
problem Challenges in vertex-level clustering for directed graphs due to edge directionality.
method Parametrized Power-Iteration Clustering (ParPIC) based on reversible random walks and diffusion operators.
result ParPIC achieves competitive clustering accuracy with improved scalability compared to spectral and teleportation-based methods.
Graph diffusion processes approximate manifold heat semigroups using graph transition matrices.
problem Approximating manifold heat semigroups from graph data under low regularity conditions.
method Iterating graph transition matrix P to approximate Qt=etΔ, bounding error in ∞-norm. result Convergence rates O(N−2/(d+6)) for manifold heat semigroup approximation, valid for in-sample and out-of-sample. Discriminator guidance improves autoregressive diffusion models for generating molecular graphs.
problem Improving the accuracy of autoregressive diffusion models for generating molecular graphs.
method Deriving ways to use a discriminator with a pretrained generative model in the discrete case, including optimal and sub-optimal scenarios.
result Using a discriminator can correct pretrained models and improve exact sampling from the data distribution.
Finslerian graph neural networks recover nonlinear diffusion geometry
problem Graph neural networks on point clouds
method Estimates of the Finsler Laplacian
result Recovery of Finsler geometry
Existing graph neural networks may suffer from the "suspended animation problem" when the model architecture goes deep. Meanwhile, for some graph learning scenarios, e.g., nodes with text/image attributes or graphs with long-distance node correlations, deep graph neural networks will be necessary for effective graph re…
AdaCAD improves semi-supervised classification by focusing on intra-class nodes.
problem Improving semi-supervised classification by addressing inter-class connections in graphs.
method AdaCAD uses a class-attentive diffusion process to adaptively aggregate nodes based on their class similarity.
result AdaCAD significantly outperforms state-of-the-art methods in semi-supervised classification.
CoTj improves diffusion model quality and stability via graph planning.
problem Rigidity in diffusion models due to high-dimensional state space.
method Chain-of-Trajectories (CoTj) framework using Diffusion DNA for graph planning.
result CoTj discovers context-aware trajectories improving output quality and stability.
FSD-CAP improves graph feature imputation under high missing rates.
problem Challenges in imputing missing node features in graphs, especially under high missing rates.
method Two-stage framework: subgraph expansion, fractional diffusion, class-aware propagation.
result Significantly improved imputation quality compared to existing methods, achieving high accuracy on benchmark datasets.
Local graph clustering improves with noisy labels, enhancing accuracy and performance.
problem Local graph clustering with noisy labels for node information.
method Constructing a weighted graph with noisy labels and using diffusion-based clustering.
result Diffusion in the weighted graph yields more accurate recovery of target clusters.
This paper introduces a novel graph signal processing framework for building graph-based models from classes of filtered signals. In our framework, graph-based modeling is formulated as a graph system identification problem, where the goal is to learn a weighted graph (a graph Laplacian matrix) and a graph-based filter…
IFH models graph generation with adjustable sequentiality.
problem Designing flexible graph generation models between one-shot and sequential approaches.
method Based on DDPM, IFH uses a node removal process to generate graphs with adjustable sequentiality.
result IFH models improve graph generation quality and efficiency compared to current methods.
Diffusion-based classifiers such as those relying on the Personalized PageRank and the Heat kernel, enjoy remarkable classification accuracy at modest computational requirements. Their performance however is affected by the extent to which the chosen diffusion captures a typically unknown label propagation mechanism, t…
VDWs enhance graph neural networks for analyzing complex data.
problem Analyzing data on non-Euclidean geometries.
method Incorporating vector diffusion wavelets into geometric graph neural networks.
result VDW-GNNs effectively analyze synthetic and real-world data.
Algorithm estimates graph structure with prior information and Langevin diffusion.
problem Support estimation of partially known Gaussian graphical models.
method Proposes an algorithm using annealed Langevin diffusion and graph neural networks to estimate the posterior distribution of the graph.
result Demonstrates the benefits of the approach through numerical experiments.
Graph neural network using Beltrami flow for feature and topology evolution.
problem Efficient feature learning and topology evolution on graphs.
method Discretized Beltrami flow applied to graph neural networks with positional encodings.
result Achieves state-of-the-art results on various benchmarks.
Study identifies five AD subtypes using graph diffusion and similarity learning.
problem Identifying homogeneous AD subtypes to improve diagnosis and treatment.
method Unsupervised clustering with graph diffusion and similarity learning.
result Five distinct AD subtypes identified with significant differences in biomarkers and clinical features.
In this paper, we study the problem of using representation learning to assist information diffusion prediction on graphs. In particular, we aim at estimating the probability of an inactive node to be activated next in a cascade. Despite the success of recent deep learning methods for diffusion, we find that they often…
Framework for training-free guidance in discrete diffusion models for molecular generation.
problem No equivalent training-free guidance methods for discrete diffusion models.
method Framework using guidance functions for discrete data.
result Demonstrated utility on molecular graph generation tasks.
New approach learns graph representations by contrasting first-order neighbors and graph diffusion views.
problem Learning node and graph level representations from graph data.
method Self-supervised approach using contrastive learning of multi-scale encodings.
result Achieves state-of-the-art performance on 8 out of 8 benchmarks.
Interpolates mean shift and spectral clustering on graphs.
problem Data clustering algorithms.
method Fokker-Planck equations on data graphs.
result New theoretical insights on diffusion maps and mean shift dynamics.
Proposes KStar Diffuser for kinematics-aware bimanual robotic manipulation.
problem Challenges in applying imitation learning to bimanual robotic tasks.
method Integrates physical robot structure into action prediction using a dynamic spatial-temporal graph and differentiable kinematics.
result Effective generation of kinematics-aware actions in both simulation and real-world environments.
New method learns discrete graph diffusion via free-energy gradient flows.
problem Challenges in translating continuous diffusion models to discrete spaces.
method Proposes a novel computational approach using a specific metric on the simplex.
result Recover the underlying functional for various graph classes.
Transformer model pretrains on synthetic graphs for AD detection.
problem Limited labeled data and class imbalance in AD diagnosis.
method Diffusion-generated synthetic graphs, Graph Transformers, transfer learning.
result Framework outperforms baselines in AD diagnosis metrics.
Graphs approximate semigroups for diffusion on Riemannian manifolds.
problem Approximating semigroups for diffusion on Riemannian manifolds.
method Discretized approximation using random walks on proximity graphs.
result Quantitative error estimates for convergence of discrete semigroups to continuous semigroups.
Textual network embedding leverages rich text information associated with the network to learn low-dimensional vectorial representations of vertices. Rather than using typical natural language processing (NLP) approaches, recent research exploits the relationship of texts on the same edge to graphically embed text. How…
SM-netFusion estimates brain network atlas by considering multiple topological measures.
problem Limited BNA estimation methods that overlook topological measures and lack discriminative power.
method Supervised multi-topology network cross-diffusion framework using degree, closeness, and eigenvector centrality measures.
result SM-netFusion produces more centered and representative templates, and improves classification accuracy.
G-FuNK learns solutions for nonlinear PDEs on multiple domains and parameters.
problem Predicting time-dependent dynamics of complex systems governed by nonlinear PDEs with varying parameters and domains.
method Graph Fourier Neural Kernels combining domain-adapted and transferable components for non-diffusive and diffusive terms.
result G-FuNK achieves low relative errors on unseen domains and fiber fields, significantly accelerating predictions.
Discrete noise improves graph generation quality and speed.
problem Generating high-quality discrete graph samples.
method Using discrete noise in diffusion models for graph generation.
result Discrete noise leads to 1.5x better MMDs and 30x faster sampling.
Nonparametric undirected graphical model selection using diffusion models
problem Undirected graphical model selection
method Diffusion models
result Model selection consistency
New graph kernels capture spatio-temporal interactions.
problem Lack of justified spatio-temporal graph kernels for graph problems.
method Derive graph kernels via SPDEs for spatio-temporal modelling.
result Non-separable spatio-temporal graph kernels outperform existing ones.
We solve continuous-time latent SDE identifiability using diffusion shifts.
problem Identifiability of latent SDEs in continuous-time time series.
method Environment-induced shifts in diffusion covariance for additive-noise latent SDEs.
result Two diagonal diffusion regimes with distinct variance ratios identify latent coordinates up to permutation and scaling.
Survey of Laplacian-based methods for data dimensionality reduction and embedding.
problem Efficiently reducing high-dimensional data to lower dimensions while preserving important features and structures.
method Laplacian-based methods including spectral clustering, Laplacian eigenmap, locality preserving projection, graph embedding, and diffusion map.
result Comprehensive overview of various optimization variants and applications of Laplacian-based techniques.