Benchmarked over 70 graph clustering algorithms.
arXiv research
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A regularized optimization problem over a large unstructured graph is studied, where the regularization term is tied to the graph geometry. Typical regularization examples include the total variation and the Laplacian regularizations over the graph. When applying the proximal gradient algorithm to solve this problem, t…
Graph alignment in two correlated random graphs refers to the task of identifying the correspondence between vertex sets of the graphs. Recent results have characterized the exact information-theoretic threshold for graph alignment in correlated Erdős-Rényi graphs. However, very little is known about the existence of e…
PASCO speeds up graph clustering for large graphs.
Given two graphs, the graph matching problem is to align the two vertex sets so as to minimize the number of adjacency disagreements between the two graphs. The seeded graph matching problem is the graph matching problem when we are first given a partial alignment that we are tasked with completing. In this paper, we m…
New algorithm improves bandit with graph feedback by decomposing regret.
Study on matching nodes between graphs to preserve edges, focusing on limits and algorithms.
Algorithm calculates genus of embedded graphs on surfaces.
Algorithm determines spatial graph isomorphism with vertex, edge colorings and orientations.
Paper develops an online EM algorithm for graph signal inference from streaming data.
New algorithms for causal bandits without knowing the graph structure.
Improved graph matching algorithm robust to noise.
Generalized belief propagation converges to optimal solutions on graphs with motifs.
Efficient algorithm for matching graphs with community structure.
Improved text summarization using belief propagation on weighted bipartite graphs.
We propose an ensemble clustering algorithm for graphs (ECG), which is based on the Louvain algorithm and the concept of consensus clustering. We validate our approach by replicating a recently published study comparing graph clustering algorithms over artificial networks, showing that ECG outperforms the leading algor…
Embedding graph nodes into a vector space can allow the use of machine learning to e.g. predict node classes, but the study of node embedding algorithms is immature compared to the natural language processing field because of a diverse nature of graphs. We examine the performance of node embedding algorithms with respe…
Differentially private graph learning via bounded sensitivity PPR.
Graph Neural Networks outperform the Weisfeiler-Lehman algorithm in representation power.
We describe an algorithm that recognizes some (perhaps all) intrinsically knotted (IK) graphs, and can help find knotless embeddings for graphs that are not IK. The algorithm, implemented as a Mathematica program, has already been used by Goldberg, Mattman, and Naimi [6] to greatly expand the list of known minor minima…
A general graph-structured neural network architecture operates on graphs through two core components: (1) complex enough message functions; (2) a fixed information aggregation process. In this paper, we present the Policy Message Passing algorithm, which takes a probabilistic perspective and reformulates the whole inf…
Bayesian graph learning improves graph representation accuracy.
A new algorithm tackles graph-based contextual bandits with efficient regret bounds.
We present a novel approximate graph matching algorithm that incorporates seeded data into the graph matching paradigm. Our Joint Optimization of Fidelity and Commensurability (JOFC) algorithm embeds two graphs into a common Euclidean space where the matching inference task can be performed. Through real and simulated …
Chordal graphs can be used to encode dependency models that are representable by both directed acyclic and undirected graphs. This paper discusses a very simple and efficient algorithm to learn the chordal structure of a probabilistic model from data. The algorithm is a greedy hill-climbing search algorithm that uses t…
Polynomial-time algorithm matches correlated random graphs with non-vanishing correlation.
This paper introduces a novel graph signal processing framework for building graph-based models from classes of filtered signals. In our framework, graph-based modeling is formulated as a graph system identification problem, where the goal is to learn a weighted graph (a graph Laplacian matrix) and a graph-based filter…
We recently proposed a new ensemble clustering algorithm for graphs (ECG) based on the concept of consensus clustering. We validated our approach by replicating a study comparing graph clustering algorithms over benchmark graphs, showing that ECG outperforms the leading algorithms. In this paper, we extend our comparis…
Register allocation, which is a crucial phase of a good optimizing compiler, relies on graph coloring. Hence, an efficient graph coloring algorithm is of paramount importance. In this work we try to learn a good heuristic for coloring interference graphs that are used in the register allocation phase. We aim to handle …
Graph Convolutional Networks(GCNs) play a crucial role in graph learning tasks, however, learning graph embedding with few supervised signals is still a difficult problem. In this paper, we propose a novel training algorithm for Graph Convolutional Network, called Multi-Stage Self-Supervised(M3S) Training Algorithm, co…
One of the most fundamental concepts in statistics is the concept of sample mean. Properties of the sample mean that are well-defined in Euclidean spaces become unwieldy or even unclear in graph spaces. Open problems related to the sample mean of graphs include: non-existence, non-uniqueness, statistical inconsistency,…
Graphical models use graphs to compactly capture stochastic dependencies amongst a collection of random variables. Inference over graphical models corresponds to finding marginal probability distributions given joint probability distributions. In general, this is computationally intractable, which has led to a quest fo…
New algorithm identifies causal relationships from graphs, even with selection bias.
Graphs are fundamental mathematical structures used in various fields to represent data, signals and processes. In this paper, we propose a novel framework for learning/estimating graphs from data. The proposed framework includes (i) formulation of various graph learning problems, (ii) their probabilistic interpretatio…
Algorithm matches vertices of correlated Erdős-Rényi graphs efficiently.
In this paper, we consider recommender systems with side information in the form of graphs. Existing collaborative filtering algorithms mainly utilize only immediate neighborhood information and have a hard time taking advantage of deeper neighborhoods beyond 1-2 hops. The main caveat of exploiting deeper graph informa…
Polynomial-time algorithm estimates edge density of random graphs with privacy and robustness.
This work aims at recovering signals that are sparse on graphs. Compressed sensing offers techniques for signal recovery from a few linear measurements and graph Fourier analysis provides a signal representation on graph. In this paper, we leverage these two frameworks to introduce a new Lasso recovery algorithm on gra…
We describe the first sub-quadratic sampling algorithm for the Multiplicative Attribute Graph Model (MAGM) of Kim and Leskovec (2010). We exploit the close connection between MAGM and the Kronecker Product Graph Model (KPGM) of Leskovec et al. (2010), and show that to sample a graph from a MAGM it suffices to sample sm…
New algorithms verify and search causal graphs with minimal interventions.
OmniMatch algorithm perfectly matches graphs without edge correlation.
Interpolates mean shift and spectral clustering on graphs.
Spectral algorithms are graph partitioning algorithms that partition a node set of a graph into groups by using a spectral embedding map. Clustering techniques based on the algorithms are referred to as spectral clustering and are widely used in data analysis. To gain a better understanding of why spectral clustering i…
Optimizes graph neural networks using natural gradient descent.
Paper proposes an algorithm to reconstruct optimal model structure from graph adjacency matrix.
In this paper we discuss four problems regarding Markov equivalences for subclasses of loopless mixed graphs. We classify these four problems as finding conditions for internal Markov equivalence, which is Markov equivalence within a subclass, for external Markov equivalence, which is Markov equivalence between subclas…
Graph Neural Networks (GNNs) are a powerful representational tool for solving problems on graph-structured inputs. In almost all cases so far, however, they have been applied to directly recovering a final solution from raw inputs, without explicit guidance on how to structure their problem-solving. Here, instead, we f…
Paper tackles graph matching with partially correct seeds, improving performance guarantees.