Machine learning has been gaining traction in recent years to meet the demand for tools that can efficiently analyze and make sense of the ever-growing databases of biomedical data in health care systems around the world. However, effectively using machine learning methods requires considerable domain expertise, which …
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18 results for “TPOT”
Study on AutoML robustness with dirty data.
problem Robustness of AutoML-generated pipelines with noisy data.
method Investigated TPOT, H2O, and AutoKeras systems; analyzed accuracy and pipeline structure.
result Dirty data can improve robustness of AutoML solutions.
The use of machine learning (ML) algorithms has significantly increased in neuroscience. However, from the vast extent of possible ML algorithms, which one is the optimal model to predict the target variable? What are the hyperparameters for such a model? Given the plethora of possible answers to these questions, in th…
AutoML serves as the bridge between varying levels of expertise when designing machine learning systems and expedites the data science process. A wide range of techniques is taken to address this, however there does not exist an objective comparison of these techniques. We present a benchmark of current open source Aut…
This paper presents our contribution to PolEval 2019 Task 6: Hate speech and bullying detection. We describe three parallel approaches that we followed: fine-tuning a pre-trained ULMFiT model to our classification task, fine-tuning a pre-trained BERT model to our classification task, and using the TPOT library to find …
Missing data has a ubiquitous presence in real-life applications of machine learning techniques. Imputation methods are algorithms conceived for restoring missing values in the data, based on other entries in the database. The choice of the imputation method has an influence on the performance of the machine learning t…
Framework for analyzing dynamic topological changes in point clouds using persistent homology and dynamic optimal transport.
problem Analyzing transient structural reorganizations during dynamic phase transitions in time-evolutionary point clouds.
method Hierarchical dynamic evaluation framework driven by topological and hypergraph reconstruction strategy.
result Combining transport-based alignment with multi-scale entropy diagnostics for dynamic topological analysis.
With the maturation of metabolomics science and proliferation of biobanks, clinical metabolic profiling is an increasingly opportunistic frontier for advancing translational clinical research. Automated Machine Learning (AutoML) approaches provide exciting opportunity to guide feature selection in agnostic metabolic pr…
Machine learning pipeline potentially consists of several stages of operations like data preprocessing, feature engineering and machine learning model training. Each operation has a set of hyper-parameters, which can become irrelevant for the pipeline when the operation is not selected. This gives rise to a hierarchica…
As an emerging field, Automated Machine Learning (AutoML) aims to reduce or eliminate manual operations that require expertise in machine learning. In this paper, a graph-based architecture is employed to represent flexible combinations of ML models, which provides a large searching space compared to tree-based and sta…
As a human choosing a supervised learning algorithm, it is natural to begin by reading a text description of the dataset and documentation for the algorithms you might use. We demonstrate that the same idea improves the performance of automated machine learning methods. We use language embeddings from modern NLP to imp…
Building a machine learning (ML) pipeline in an automated way is a crucial and complex task as it is constrained with the available time budget and resources. This encouraged the research community to introduce several solutions to utilize the available time and resources. A lot of work is done to suggest the most prom…
The evaluation of machine learning (ML) pipelines is essential during automatic ML pipeline composition and optimisation. The previous methods such as Bayesian-based and genetic-based optimisation, which are implemented in Auto-Weka, Auto-sklearn and TPOT, evaluate pipelines by executing them. Therefore, the pipeline c…
We study the AutoML problem of automatically configuring machine learning pipelines by jointly selecting algorithms and their appropriate hyper-parameters for all steps in supervised learning pipelines. This black-box (gradient-free) optimization with mixed integer & continuous variables is a challenging problem. We pr…
Automated machine learning (AutoML) has received increasing attention in the recent past. While the main tools for AutoML, such as Auto-WEKA, TPOT, and auto-sklearn, mainly deal with single-label classification and regression, there is very little work on other types of machine learning tasks. In particular, there is a…
AutoGluon-Tabular automates tabular data ML with single line Python.
problem Training accurate ML models on unprocessed tabular data.
method Ensembling multiple models in multiple layers.
result Outperforms competitors in accuracy and robustness.
AutoML system boosts interpretability without sacrificing performance.
problem Laypeople struggle with interpreting complex ensembles of black-box models.
method Componentwise boosting algorithm for interpretable additive models.
result Interpretable models are competitive in performance and user-friendly.
Motivation: Thanks to digitization, we often have access to large databases, consisting of various fields of information, ranging from numbers to texts and even boolean values. Such databases lend themselves especially well to machine learning, classification and big data analysis tasks. We are able to train classifier…