arXiv research

Machine learning improves RNA secondary structure prediction.

In this study, we generalize double tangent bundles to double jet bundles. We present a secondary vector bundle structure on a 1-jet of a vector bundle. We show that 1-jet of a vector bundle carries two vector bundle structures, namely primary and secondary structures. We also show that the manifold charts induced by p…

E2Efold predicts RNA secondary structures better than previous methods.

PS8-Net improves eight-state protein secondary structure prediction accuracy.

Symmetric CNNs improve sequential recommendation and protein structure prediction.

Secondary Calculus formalizes PDEs using cohomology, simplifying their study.

CRF model improves protein secondary structure prediction.

Mathematician summarizes protein geometry and mutation effects.

We tackle the problem of protein secondary structure prediction using a common task framework. This lead to the introduction of multiple ideas for neural architectures based on state of the art building blocks, used in this task for the first time. We take a principled machine learning approach, which provides genuine,…

We give a survey of the approaches to classifying foliations, starting with the Haefliger classifying spaces and the various results and examples about the secondary classes of foliations. Various dynamical properties of foliations are introduced and discussed, including expansion rate, local entropy, and orbit growth …

Deep learning helps remove secondary $B$-mode polarization to detect primordial gravitational waves.

We study the secondary structure of RNA determined by Watson-Crick pairing without pseudo-knots using Milnor invariants of links. We focus on the first non-trivial invariant, which we call the Heisenberg invariant. The Heisenberg invariant, which is an integer, can be interpreted in terms of the Heisenberg group as wel…

In this paper we define K-theoretic secondary invariants attached to a Lie groupoid $G$. The K-theory of $C^*_r(G_{ad}^0)$ (where $G_{ad}^0$ is the adiabatic deformation $G$ restricted to the interval $[0,1)$) is the receptacle for K-theoretic secondary invariants. We give a Lie groupoid version of construction given b…

Let G be a simple Lie group of real rank one, and S the ideal boundary of the corresponding symmetric space of noncompact type (H^n_R, H^n_C, H^n_H or H^2_O). We show the finiteness of the possible values of the secondary characteristic classes of transversely homogeneous foliations on a fixed manifold whose transverse…

Constructs combinatorial 2D topological field theories from cyclic A-infinity algebras.

Study of spectral flow in symmetric Toeplitz operator families.

The knot invariant Upsilon, defined by Ozsvath, Stipsicz, and Szabo, induces a homomorphism from the smooth knot concordance group to the group of piecewise linear functions on the interval [0,2]. Here we define a set of related secondary invariants, each of which assigns to a knot a piecewise linear function on [0,2].…

The paper tackles online learning with two types of losses and shows it's impossible without certain assumptions.

We introduce the secondary Stiefel-Whitney class $\tilde w_2$ of homotopically trivial diffeomorphisms and show that a homotopically trivial symplectomorphism of a ruled 4-manifold is isotopic to identity if and only if the class $\tilde w_2$ vanishes. Using this, we give a detailed description of the combinatorial str…

The problem of distributed learning and channel access is considered in a cognitive network with multiple secondary users. The availability statistics of the channels are initially unknown to the secondary users and are estimated using sensing decisions. There is no explicit information exchange or prior agreement amon…

Fuses ITRs for primary and secondary outcomes to minimize harm.

We introduce two invariants called the secondary cuspidal curvature and the bias on $5/2$-cuspidal edges, and investigate their basic properties. While the secondary cuspidal curvature is an analog of the cuspidal curvature of (ordinary) cuspidal edges, there are no invariants corresponding to the bias. We prove that t…

What are called secondary characteristic classes in Chern-Weil theory are a refinement of ordinary characteristic classes of principal bundles from cohomology to differential cohomology. We consider the problem of refining the construction of secondary characteristic classes from cohomology sets to cocycle spaces; and …

A new method for optimizing hierarchical multi-objective problems.

We study algebraic structures ($L_\infty$ and $A_\infty$-algebras) introduced by Gaiotto, Moore and Witten in their recent work devoted to certain supersymmetric 2-dimensional massive field theories. We show that such structures can be systematically produced in any number of dimensions by using the geometry of seconda…

We verify that the formula of X. Ma for the analytic torsion form of an iterated fibration implies that Lott's secondary analytic index is functorial.

Paper constructs a cohomology class related to McDuff's secondary class, proving it transgresses to the Euler class of foliated sphere bundles.

The study improves credit evaluation in peer-to-peer lending using machine learning.

A famous construction of Gelfand, Kapranov and Zelevinsky associates to each finite point configuration $A \subset \mathbb{R}^d$ a polyhedral fan, which stratifies the space of weight vectors by the combinatorial types of regular subdivisions of $A$. That fan arises as the normal fan of a convex polytope. In a complete…

The covariant phase space of a Lagrangian field theory is the solution space of the associated Euler-Lagrange equations. It is, in principle, a nice environment for covariant quantization of a Lagrangian field theory. Indeed, it is manifestly covariant and possesses a canonical (functional) "presymplectic structure" w …

New stability theorem for nonorientable surfaces mapping class groups.

We introduce a notion of secondary characteristic classes of Lie algebra extensions. As a spin-off of our construction we obtain a new proof of Lecomte's generalization of the Chern-Weil homomorphism.

The paper studies connections in superintegrable systems, revealing geometric insights.

Automorphisms of Kodaira surfaces are shown to be affine transformations.

RNA structures show that a significant portion of bases do not form hydrogen bonds.

Defines and proves CR invariants on five-manifolds.

The Dirac equation for massive free electrically neutral spin 1/2 particles in a gravitation field is considered. The secondary quantization procedure is applied to it and the Hilbert space of multiparticle quantum states is constructed.

In this paper we construct an infinite family of knots with vanishing Upsilon invariant $Υ$, although their secondary Upsilon invariants $Υ^2$ show that they are linearly independent in the smooth knot concordance group. We also prove a conjecture in a paper by Allen.

We discuss some aspects of index and secondary index theory for flat bundles with duality. This theory was first developed by J. Lott. Our main purpose in the present paper is to provide a modification with better functorial properties.

In this paper, we introduce six axioms for relative Bott-Chern secondary characteristic classes and prove the uniqueness and existence theorem for them. Such a work provides us a natural way to understand and hence to prove the arithmetic Grothendieck-Riemann-Roch theorem.

We define and study the secondary Chern-Euler class for a general submanifold of a Riemannian manifold. Using this class, we define and study index for a vector field with non-isolated singularities on a submanifold. As an application, our studies give conceptual proofs of a classical result of Chern.

The note answers a question about Betti numbers for 1D Euclidean space.

The class ${\sf IV}_2$ of $2$-nondegenerate constant Levi rank $1$ hypersurfaces $M^5 \subset \mathbb{C}^3$ is governed by Pocchiola's two primary invariants $W_0$ and $J_0$. Their vanishing characterizes equivalence of such a hypersurface $M^5$ to the tube $M_{\sf LC}^5$ over the real light cone in $\mathbb{R}^3$. Whe…

Moduli spaces of doubly periodic monopoles, also called monopole walls or monowalls, are hyperkähler; thus, when four-dimensional, they are self-dual gravitational instantons. We find all monowalls with lowest number of moduli. Their moduli spaces can be identified, on the one hand, with Coulomb branches of five-dimens…

Global invariant for path structures and differential equations defined on torus.

Study controls bifurcations in Eulerian flows with multiple Hopf singularities.

The Law of Vector Fields is a term coined by Gottlieb for a relative Poincaré-Hopf theorem. It was first proved by Morse and expresses the Euler characteristic of a manifold with boundary in terms of the indices of a generic vector field and the inner part of its tangential projection on the boundary. We give two diffe…

In this paper we study the variability and rigidity of secondary characteristic classes which arise from flat connections on a manifold. Considering the connection as a Lie-algebra valued one-form, we study the characteristic map from Lie algebra cohomology to de Rham cohomology of the manifold, and prove that if the L…