Developed a Particle-Gibbs sampler for Bayesian feature allocation models.
arXiv research
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New methods improve sampling from complex dynamical models.
New PG samplers improve inference in coupled state-space models.
Additive regression trees are flexible non-parametric models and popular off-the-shelf tools for real-world non-linear regression. In application domains, such as bioinformatics, where there is also demand for probabilistic predictions with measures of uncertainty, the Bayesian additive regression trees (BART) model, i…
Infinite Hidden Markov Models (iHMM's) are an attractive, nonparametric generalization of the classical Hidden Markov Model which can automatically infer the number of hidden states in the system. However, due to the infinite-dimensional nature of transition dynamics performing inference in the iHMM is difficult. In th…
Bayesian inference in state-space models is challenging due to high-dimensional state trajectories. A viable approach is particle Markov chain Monte Carlo, combining MCMC and sequential Monte Carlo to form "exact approximations" to otherwise intractable MCMC methods. The performance of the approximation is limited to t…
New method for efficient conditional sampling from diffusion models.
A new algorithm reduces bias in estimating model parameters.
Particle Markov chain Monte Carlo (PMCMC) is a systematic way of combining the two main tools used for Monte Carlo statistical inference: sequential Monte Carlo (SMC) and Markov chain Monte Carlo (MCMC). We present a novel PMCMC algorithm that we refer to as particle Gibbs with ancestor sampling (PGAS). PGAS provides t…
Bayesian model learns multiscale interactions in complex systems.
dSMC improves parallel processing of state-space models.
We present a novel method in the family of particle MCMC methods that we refer to as particle Gibbs with ancestor sampling (PG-AS). Similarly to the existing PG with backward simulation (PG-BS) procedure, we use backward sampling to (considerably) improve the mixing of the PG kernel. Instead of using separate forward a…
In this study, we present a multi-class graphical Bayesian predictive classifier that incorporates the uncertainty in the model selection into the standard Bayesian formalism. For each class, the dependence structure underlying the observed features is represented by a set of decomposable Gaussian graphical models. Emp…
Particle Markov chain Monte Carlo techniques rank among current state-of-the-art methods for probabilistic program inference. A drawback of these techniques is that they rely on importance resampling, which results in degenerate particle trajectories and a low effective sample size for variables sampled early in a prog…
Corrected samplers reduce discretization error in discrete flow models without additional computational cost.
New samplers improve MCMC efficiency in high dimensions.
We propose a new algorithm to do posterior sampling of Kingman's coalescent, based upon the Particle Markov Chain Monte Carlo methodology. Specifically, the algorithm is an instantiation of the Particle Gibbs Sampling method, which alternately samples coalescent times conditioned on coalescent tree structures, and tree…
New study shows Gaussian samplers struggle with heavy-tailed targets, while stable samplers excel.
SRO optimizes decisions against worst-case sampler induced by generative models.
The Gibbs sampler is a particularly popular Markov chain used for learning and inference problems in Graphical Models (GMs). These tasks are computationally intractable in general, and the Gibbs sampler often suffers from slow mixing. In this paper, we study the Swendsen-Wang dynamics which is a more sophisticated Mark…
Discrete diffusion samplers improve sampling from unnormalised densities.
Unified analysis for deterministic samplers in diffusion models.
This paper analyzes MaskGIT sampler and introduces a moment sampler for faster masked diffusion sampling.
PTSD improves neural samplers by combining diffusion models and PT, enhancing efficiency.
This paper introduces a neural sampler for scalable sampling from complex distributions.
Two parallel samplers enhance image quality in limited denoising steps.
New PDMP samplers tackle variable selection in models.
For large scale on-line inference problems the update strategy is critical for performance. We derive an adaptive scan Gibbs sampler that optimizes the update frequency by selecting an optimum mini-batch size. We demonstrate performance of our adaptive batch-size Gibbs sampler by comparing it against the collapsed Gibb…
We study the non-asymptotic behavior of a Coulomb gas on a compact Riemannian manifold. This gas is a symmetric n-particle Gibbs measure associated to the two-body interaction energy given by the Green function. We encode such a particle system by using an empirical measure. Our main result is a concentration inequalit…
The Bouncy Particle Sampler is a novel rejection-free non-reversible sampler for differentiable probability distributions over continuous variables. We generalize the algorithm to piecewise differentiable distributions and apply it to generic binary distributions using a piecewise differentiable augmentation. We illust…
Neural network MCMC sampler maximizes proposal entropy for efficient sampling.
Develops new bounds for deterministic samplers in diffusion models.
PDMP samplers improve Bayesian PDE coefficient inference.
Gibbs sampling, as a model learning method, is known to produce the most accurate results available in a variety of domains, and is a de facto standard in these domains. Yet, it is also well known that Gibbs random walks usually have bottlenecks, sometimes termed "local maxima", and thus samplers often return suboptima…
We present the particle stochastic approximation EM (PSAEM) algorithm for learning of dynamical systems. The method builds on the EM algorithm, an iterative procedure for maximum likelihood inference in latent variable models. By combining stochastic approximation EM and particle Gibbs with ancestor sampling (PGAS), PS…
The paper evaluates samplers on multi-modal targets, focusing on mode separation and recovery.
We present a new data-driven benchmark system to evaluate the performance of new MCMC samplers. Taking inspiration from the COCO benchmark in optimization, we view this task as having critical importance to machine learning and statistics given the rate at which new samplers are proposed. The common hand-crafted exampl…
With the rapidly growing scales of statistical problems, subset based communication-free parallel MCMC methods are a promising future for large scale Bayesian analysis. In this article, we propose a new Weierstrass sampler for parallel MCMC based on independent subsets. The new sampler approximates the full data poster…
Unified framework extends adjoint Schrödinger bridge sampler to discrete spaces.
Single-step samplers generate high-quality samples efficiently.
BNEM improves Boltzmann sampler efficiency.
LSD distills high-quality samplers for DDMs with fewer steps.
New sampler reduces MCMC complexity for Bayesian variable selection.
Generative neural samplers estimate quantum spin system properties.
Latent Dirichlet Allocation (LDA) is a topic model widely used in natural language processing and machine learning. Most approaches to training the model rely on iterative algorithms, which makes it difficult to run LDA on big corpora that are best analyzed in parallel and distributed computational environments. Indeed…
New sampler tackles complex discrete energy landscapes efficiently.
We introduce interacting particle Markov chain Monte Carlo (iPMCMC), a PMCMC method based on an interacting pool of standard and conditional sequential Monte Carlo samplers. Like related methods, iPMCMC is a Markov chain Monte Carlo sampler on an extended space. We present empirical results that show significant improv…
Improved Gibbs sampler speeds up Bayesian exponential smoothing model.