Bayesian LSTMs improve medical time series classification accuracy.
problem Uncertainty in machine learning decisions for medical practitioners.
method Used Bayesian LSTMs to classify medical time series datasets.
result Bayesian LSTMs provide significant accuracy improvements over standard LSTMs.
Unsupervised learning improves clinical predictions from medical time series.
problem Improving clinical decision making through unlabeled medical data.
method Evaluation of unsupervised representation learning on medical time series using sequence-to-sequence models.
result A forecasting Seq2Seq model with an attention mechanism achieves the best performance.
This paper describes a time-series-based classification approach to identify similarities between bio-medical-based situations. The proposed approach allows classifying collections of time-series representing bio-medical measurements, i.e., situations, regardless of the type, the length and the quantity of the time-ser…
Generative models create realistic medical time series data.
problem Creating realistic medical time series data for training models.
method Proposed Recurrent Conditional GAN (RCGAN) for generating real-valued multi-dimensional time series.
result RCGANs can generate realistic time-series data useful for supervised training with minimal performance degradation.
This paper reviews deep learning methods for handling irregularly sampled medical time series data.
problem Handling irregularly sampled medical time series data for personalized treatment and precise diagnosis.
method Summarizes and compares deep learning methods categorized by technology and task.
result Achieved good results in data imputation and downstream tasks.
Bayes-CATSI uses variational Bayesian deep learning for medical time series data imputation.
problem Missing values in medical time series data.
method Bayes-CATSI integrates variational inference for uncertainty quantification and context-aware imputation.
result Bayes-CATSI outperforms CATSI by 9.57% in imputation performance.
Rough Transformers improve efficiency for medical time-series data.
problem Efficiently modeling irregularly sampled, long-range time-series data.
method Introducing Rough Transformers, a Transformer variant with continuous-time representations and multi-view signature attention.
result Rough Transformers outperform vanilla Transformers while using less computational resources.
Study clusters Kenyan medical insurance companies based on financial performance and reporting consistency.
problem Identifying financial health and reporting consistency in Kenyan medical insurance companies.
method Advanced clustering techniques (KMeans, DTW) on financial ratios and time series data.
result Four distinct clusters identified, each representing different financial performance and reporting consistency combinations.
TNC learns time series representations by leveraging temporal neighborhoods.
problem Complex, unlabeled time series data.
method Temporal Neighborhood Coding (TNC) with a debiased contrastive objective.
result TNC outperforms other unsupervised methods in time series clustering and classification.
ShortFuse improves deep learning for medical time series by integrating structured covariates.
problem Joint optimization of time series and structured covariates in healthcare applications.
method Hybrid convolutional and LSTM cells that incorporate shared weights across the temporal domain.
result ShortFuse outperforms competing models by 3% in two biomedical applications.
Generates synthetic health data from patient visits.
problem Lack of longitudinal, event-based medical data.
method Transformed longitudinal data into summary statistics, trained GAN.
result Synthetic data closely resembles real data univariately.
Gaussian process variational autoencoders improve disentanglement in time series data.
problem Learning disentangled representations from multivariate time series data.
method Model each latent channel with a Gaussian process prior and a structured variational distribution to capture temporal dependencies.
result Competitive performance on benchmark and real-world medical time series data.
The paper proposes a deep generative model for complex disease trajectories.
problem Modeling and analyzing complex disease trajectories.
method Deep generative time series approach with semi-supervised latent processes.
result The model can discover novel aspects of diseases and cluster them into new sub-types.
Proposes a deep learning model for probabilistic forecasting that is also interpretable.
problem Inability to explain predictions of neural network-based time series forecasting methods.
method Deep Autoregressive Networks (DANLIP) for locally interpretable probabilistic forecasting.
result DANLIP provides interpretable predictions with comparable performance to state-of-the-art methods.
TAnoGan detects anomalies in time series data using GANs.
problem Anomaly detection in time series data.
method Generative Adversarial Networks (GAN) for unsupervised anomaly detection.
result TAnoGan outperforms traditional and neural network models in anomaly detection.
MedGP improves online patient health status prediction using clinical and lab covariates.
problem Real-time monitoring of hospital patients for accurate health status inference.
method Bayesian nonparametric Gaussian process regression with a sparse kernel.
result MedGP significantly improves online prediction accuracy for patient health status across different disease subgroups and studies.
ExpCLR uses expert features to improve time-series representation learning.
problem Current representation learning approaches fail to ensure useful properties for time-series data.
method ExpCLR employs expert features to replace data transformations in contrastive learning, ensuring two useful properties for time-series representations.
result ExpCLR outperforms state-of-the-art methods on three real-world time-series datasets.
Survey of data augmentation methods for improving deep learning on time series data.
problem Limited labeled data in real-world time series applications.
method Review and comparison of data augmentation methods for time series.
result Empirical comparison of data augmentation methods for various time series tasks.
GANs generate realistic ECG signals for medical research.
problem Privacy concerns in sharing medical data.
method Developed GAN architectures to generate synthetic ECG signals.
result GANs can generate diverse, structurally similar synthetic ECG signals.
A new model uses GPs and latent force models to predict patient responses to drugs.
problem Challenges in modeling short-term effects of drugs on patient physiology.
method Hybrid Gaussian process with latent force model for joint modeling of patient physiology and drug effects.
result The model accurately predicts patient responses to three common drugs, showing competitive performance.
Medical researchers are coming to appreciate that many diseases are in fact complex, heterogeneous syndromes composed of subpopulations that express different variants of a related complication. Time series data extracted from individual electronic health records (EHR) offer an exciting new way to study subtle differen…
New method discovers time series motifs in datasets with missing data.
problem Missing data hinders motif discovery in time series.
method Admissible time series motif discovery technique for datasets with missing data.
result Proves method is admissible, producing no false negatives.
New algorithm uncovers causal relations in non-stationary time series.
problem Discovering causal relations from non-stationary time series data.
method Constraint-based, non-parametric algorithm for semi-stationary time series.
result Algorithm PCMCIΩ identifies causal graph with CI tests. Novel method converts time series data into functional data for high dimensional classification.
problem Small sample size problem in high dimensional time series data.
method Classwise Functional Principal Component Analysis (PCA) followed by Bayesian linear classifier.
result Demonstrated efficacy on synthetic and real data sets.
Catch22 reduces time series feature space to 22 canonical characteristics for efficient analysis.
problem Efficiently capturing and comparing time series properties for diverse applications.
method Inference of minimal sets of time-series features from a comprehensive library.
result Catch22 (22 canonical characteristics) reduces computation time and complexity.
A new unsupervised contrastive learning framework improves time series representation learning.
problem Lack of labeled data in time series data.
method Proposes an unsupervised contrastive learning framework using a novel contrastive loss and data augmentation.
result Framework outperforms other approaches on univariate and multivariate time series, and benefits transfer learning.
This paper reviews causal inference methods for time series data.
problem Estimating treatment effects and identifying causal relations from time series data.
method Comprehensive review of approaches for treatment effect estimation and causal discovery.
result Provides a list of evaluation metrics and datasets for time series causal inference.
Cross-modal data programming speeds medical machine learning.
problem Labeling medical datasets is time-consuming and requires expert knowledge.
method Generates training labels by writing rules over auxiliary modalities, estimating accuracies and correlations.
result Matches or exceeds hand-labeling with statistical significance, faster and more flexible.
Rocket algorithm classifies time-series data efficiently using random projections and natural sparsity.
problem Time-series classification challenges in diverse fields.
method Random convolutional kernels, non-linear transformation, compressed sensing framework.
result Rocket algorithm preserves discriminative patterns in time-series data and expresses inherent sparsity.
Unsupervised learning summarizes EHR data into a patient status vector.
problem Challenges in modeling electronic health records due to irregularities and varying procedures/diagnoses.
method Two-step unsupervised representation learning scheme using auto-encoders and forecasting tasks.
result Improved generalization performance on mortality and readmission tasks.
Detects change points in time series focusing on specific components.
problem Identifying moments when specific components of multivariate time series change distributions.
method Two-stage non-parametric algorithm: causal structure learning followed by change point detection.
result Validated the approach on synthetic and real-world datasets.
Predicting MRI coil failures using time series classification.
problem Early detection of MRI hardware failures to prevent downtime.
method Training a statistical model on sequential image data features over time.
result LSTMs achieved an F-score of 86.43% and 98.33% accuracy in predicting coil damage.
Tree regularization improves deep model interpretability without sacrificing accuracy.
problem Lack of interpretability in deep models hinders their adoption.
method Explicitly regularizes deep models to be closely modeled by decision trees with few nodes.
result Tree-regularized models are easier for humans to simulate than simpler penalties without sacrificing accuracy.
APC overcomes missing data and class imbalance in time series data.
problem Missing data and class imbalance in time series data.
method Self-supervised learning with Autoregressive Predictive Coding (APC).
result APC improves classification performance on real-world medical datasets.
This paper reviews early time series classification methods.
problem Minimizing class prediction delay in time-sensitive applications.
method Divided into four categories: prefix based, shapelet based, model based, and miscellaneous approaches.
result Demonstrates reasonable performance in various applications.
mGRN improves multivariate time series prediction by managing marginal and joint memories.
problem Extracting dependencies in multivariate sequential data with strong serial and cross-sectional dependencies.
method Developed a novel recurrent network architecture, Memory-Gated Recurrent Networks (mGRN), with gates for marginal and joint memories.
result mGRN consistently outperforms state-of-the-art architectures on various public datasets.
MSLs use parallelizable root-finding for efficient ODE and PDE solutions.
problem Efficiently solving initial value problems for ODEs and PDEs.
method Leveraging time-parallel methods, MSLs use parallelizable root-finding algorithms.
result MSLs offer significant speedups in NFEs and inference time.
Personalized healthcare predictions using deep mixed effect model with Gaussian Processes.
problem Making personalized and reliable predictions from time-series data in healthcare.
method A composite model combining a deep neural network for global trends and Gaussian Processes for individual variability.
result Practical advantages over standard time-series deep models, demonstrated on diverse EHR datasets.
Kernel TCK_IM tackles missing data in EHR time series, improving analysis.
problem Missing data complicates analysis of EHR time series.
method TCK_IM kernel using ensemble learning of mixed mode Bayesian mixture models.
result TCK_IM kernel effectively exploits missing data without imputation.
This work aims to create a large-scale model for critical care time series data.
problem Lack of large-scale datasets and distribution shifts in critical care time series data.
method Harmonized dataset creation and transfer learning research.
result Established a foundation for large-scale multi-variate time series models in critical care.
DPSOM combines self-organizing maps with deep learning for better data clustering.
problem Improving clustering performance in complex data.
method Integrates self-organizing maps with probabilistic clustering using a VAE.
result DPSOM outperforms current deep clustering methods in various applications.
CRUs model irregular time series with continuous hidden states.
problem Handling irregular time intervals in sequential data.
method Continuous Recurrent Units (CRUs) that integrate hidden states via a linear stochastic differential equation.
result CRUs outperform methods based on neural ordinary differential equations in irregular time series interpolation.
Combines LSTM with HMM to improve interpretability of RNNs.
problem Making deep neural networks more understandable and interpretable.
method Integrates LSTM and HMM, training them sequentially or jointly.
result A hybrid model outperforms standalone LSTM, especially on smaller datasets.
Algorithm finds critical subsequences in ECG beats for classification.
problem Classifying ECG beats accurately and understanding why.
method Optimized implementation of nearest neighbor algorithm with DTW distance.
result Algorithm discovers important subsequences for ECG classification.
Paper detects bias in AI medical models using CART.
problem Ensuring fairness in AI medical decision support systems.
method Uses Classification and Regression Trees (CART) algorithm to identify bias.
result Validated the CART approach in both synthetic and real-world data.
SOM-VAE learns interpretable discrete time series representations.
problem Difficult interpretation of high-dimensional time series representations.
method Interpretable discrete representation learning framework combining self-organizing maps and variational autoencoders.
result Smooth and interpretable embeddings with superior clustering performance.
POSL is an online learning algorithm for personalized predictions.
problem Real-time personalized predictions for streaming data.
method Online Super Learner algorithm that optimizes predictions with respect to baseline covariates.
result POSL provides reliable predictions and adapts to changing data environments.
The study creates benchmarks for clinical time series data to evaluate machine learning models.
problem Lack of publicly available benchmark data sets for healthcare research.
method Proposed four clinical prediction benchmarks using MIMIC-III data, evaluated various deep supervision and multitask training methods.
result Demonstrated the effectiveness of deep supervision, multitask training, and data-specific architectural modifications on neural models.