Generative adversarial networks reconstruct MRI images without full data.
problem Lack of fully-sampled ground truth data for supervised MRI reconstruction.
method Generative adversarial networks for unsupervised MRI reconstruction.
result Reconstructed images show more anatomical structure than conventional methods.
New MRI method maps tissue parameters more accurately by ignoring voxel independence.
problem Voxel independence assumption limits model fitting reliability and repeatability.
method Self-supervised deep variational approach with Gaussian mixture prior.
result Our method outperforms current techniques in dMRI simulations and real data.
StaPLR improves Alzheimer's disease classification by identifying important MRI scan types and measures.
problem Classifying Alzheimer's disease using multi-source MRI data.
method Stacked penalized logistic regression (StaPLR) with hierarchical multi-view structure and new view importance measure.
result StaPLR identifies the most important MRI scan types and measures for Alzheimer's disease classification.
XPDNet wins MRI reconstruction challenge with neural network.
problem MRI reconstruction from under-sampled data.
method Inspired by MRI and computer vision best practices, XPDNet uses a neural network.
result XPDNet achieved state-of-the-art results in the 2020 fastMRI challenge.
3D CNN accurately classifies infant neurodevelopmental age from MRI scans.
problem Estimating neurodevelopmental age in infants from MRI data.
method 3D Convolutional Neural Network (3D CNN) trained on MRI images of 112 infants.
result 3D CNN achieves 99% sensitivity and 98.3% specificity in age classification.
Deep learning improves MRI image quality from down-sampled data.
problem Improving MRI image quality from accelerated, down-sampled k-space data.
method Deep Residual Dense U-Net architecture with Residual Dense Block and new loss function.
result The proposed method achieves better performance in reconstructing high-quality images from down-sampled k-space data.
Diffusion MRI is the modality of choice to study alterations of white matter. In past years, various works have used diffusion MRI for automatic classification of AD. However, classification performance obtained with different approaches is difficult to compare and these studies are also difficult to reproduce. In the …
A fast deep learning method for parallel MRI without calibration.
problem Calibration issues in parallel MRI reconstruction.
method Model-based deep learning, self-learning non-linear annihilation filters, Fourier domain pre-learning.
result Significantly faster than SLR methods (3 orders of magnitude), improved performance with spatial domain prior.
3D CNNs interpret brain MRI differences between men and women.
problem Interpreting 3D CNNs for voxel-wise brain MRI analysis.
method Three interpretation methods: Meaningful Perturbations, Grad CAM, and Guided Backpropagation.
result Voxel-wise 3D CNN interpretation of brain MRI data.
CSGM framework applied to clinical MRI data for robust reconstructions.
problem Applying deep generative priors to clinical MRI data for high-quality reconstructions.
method Training a generative prior on brain scans from the fastMRI dataset and using Langevin dynamics for posterior sampling.
result Posterior sampling via Langevin dynamics achieves high quality reconstructions in clinical MRI data.
New neural network improves MRI reconstruction for non-Cartesian data.
problem Improving MRI reconstruction for non-Cartesian data acquisitions.
method Density-compensated unrolled neural networks.
result Density-compensated unrolled neural networks outperform baselines.
Generative models create synthetic MRI brain scans for research.
problem Lack of large, diverse medical datasets for machine learning.
method Training generative models on 40,000 MRI scans to produce 18,000 synthetic samples.
result Generated samples improve machine learning model accuracy.
Paper develops a novel kernel-based method for MRI data recovery.
problem Reconstructing dynamic MRI data on manifolds.
method Kernel bi-linear modeling in reproducing kernel Hilbert spaces.
result Validated on synthetic dMRI data, the method outperforms state-of-the-art approaches.
New method MRI improves machine learning models' ability to generalize to unseen data.
problem Machine learning models often fail to generalize well to out-of-distribution data.
method Introduces a new notion of invariance (MRI) and a practical version (MRI-v1) to improve model generalization.
result MRI-v1 guarantees invariant predictors and outperforms IRM-v1 in various settings.
In compressed sensing MRI (CS-MRI), k-space measurements are under-sampled to achieve accelerated scan times. CS-MRI presents two fundamental problems: (1) where to sample and (2) how to reconstruct an under-sampled scan. In this paper, we tackle both problems simultaneously for the specific case of 2D Cartesian sampli…
Image reconstruction from undersampled k-space data has been playing an important role for fast MRI. Recently, deep learning has demonstrated tremendous success in various fields and also shown potential to significantly speed up MR reconstruction with reduced measurements. This article gives an overview of deep learni…
Magnetic resonance imaging (MRI) is widely used in clinical practice, but it has been traditionally limited by its slow data acquisition. Recent advances in compressed sensing (CS) techniques for MRI reduce acquisition time while maintaining high image quality. Whereas classical CS assumes the images are sparse in know…
Generative Adversarial Networks create realistic brain MRI images.
problem Lack of sufficient training data for medical research.
method Experimented three GAN architectures with different loss functions and hyperparameter tuning.
result Achieved high-quality, realistic synthetic MRIs with gradient penalty and mini-batch similarity layer.
PC-RNN reconstructs MRI images from undersampled data with more details.
problem Recovering fine details from undersampled MRI data.
method Pyramid Convolutional RNN (PC-RNN) with three ConvRNN modules for multi-scale reconstruction.
result PC-RNN outperforms other methods in recovering more details from MRI images.
New method removes MRI banding without post-processing.
problem MRI banding in reconstructed images.
method Adversarial training to penalize banding structures.
result Superior banding removal compared to baseline.
Study investigates deep learning model's reliability in clinical MRI data.
problem Tackles reliability of DL models in clinical out-of-distribution MRI data.
method Investigated performance of DL model trained on diverse datasets compared to clinical data.
result Model performs better in similar protocols but worse in clinical data with different tissue contrasts.
A deep learning framework segments deep cerebellar nuclei from 7T MRI, improving accuracy and consistency.
problem Challenging to accurately segment small deep cerebellar nuclei using standard MRI protocols.
method Proposes DCN-Net, a deep learning framework that encodes contextual information and handles imbalanced data.
result Improves segmentation accuracy and consistency compared to existing methods.
Deep learning improves MRI analysis of MSK disorders.
problem Accurate and rapid analysis of musculoskeletal disorders from MRI scans.
method Convolutional neural networks (CNN) for automatic classification of knee abnormalities.
result Multi-view deep learning showed promising performance in classifying MSK abnormalities.
Deep learning predicts response to HER2-targeted breast cancer therapy.
problem Predicting response to HER2-targeted neoadjuvant chemotherapy.
method Developed and validated a deep learning approach using pre-treatment dynamic breast MRI.
result Deep learning model achieved strong performance in predicting pathological complete response.
Unpaired deep learning reconstructs MRI images from accelerated data.
problem Difficulty in acquiring matched fully sampled k-space data for supervised deep learning.
method Optimal transport driven cycleGAN architecture.
result Reconstructs high resolution MR images from accelerated k-space data.
Recent sparse MRI reconstruction models have used Deep Neural Networks (DNNs) to reconstruct relatively high-quality images from highly undersampled k-space data, enabling much faster MRI scanning. However, these techniques sometimes struggle to reconstruct sharp images that preserve fine detail while maintaining a nat…
This paper presents a deep learning method for faster magnetic resonance imaging (MRI) by reducing k-space data with sub-Nyquist sampling strategies and provides a rationale for why the proposed approach works well. Uniform subsampling is used in the time-consuming phase-encoding direction to capture high-resolution im…
The standard approach to compressive sampling considers recovering an unknown deterministic signal with certain known structure, and designing the sub-sampling pattern and recovery algorithm based on the known structure. This approach requires looking for a good representation that reveals the signal structure, and sol…
Time-resolved angiography with interleaved stochastic trajectories (TWIST) has been widely used for dynamic contrast enhanced MRI (DCE-MRI). To achieve highly accelerated acquisitions, TWIST combines the periphery of the k-space data from several adjacent frames to reconstruct one temporal frame. However, this view-sha…
Machine learning for ASD diagnosis using morphological MRI networks.
problem Challenging to diagnose ASD using MRI due to heterogeneity and incomplete network neuroscience.
method Crowdsourced Kaggle competition to develop and benchmark ML pipelines.
result First-ranked team achieved 70% accuracy, 72.5% sensitivity, and 67.5% specificity.
Predicting MRI coil failures using time series classification.
problem Early detection of MRI hardware failures to prevent downtime.
method Training a statistical model on sequential image data features over time.
result LSTMs achieved an F-score of 86.43% and 98.33% accuracy in predicting coil damage.
Generative models improve MRI reconstruction by learning image structure.
problem Improving MRI image quality from undersampled data.
method Using variational autoencoders (VAEs) to learn image structure and covariance.
result The proposed method outperforms other regularization techniques on MRI datasets.
New deep learning method improves 4D Flow MRI super-resolution under domain shift.
problem Domain shift in low-resolution 4D Flow MRI data.
method Distributional deep learning framework for domain generalization.
result Framework significantly outperforms traditional methods in real data applications.
New method uses MRI data to improve PET tomography uncertainty quantification.
problem Improving uncertainty quantification in emission tomography with multimodal data.
method Nonparametric posterior learning technique adapted for Poisson-type data.
result Sampling algorithms are scalable, parallelizable, and easy to implement.
Un-trained neural networks outperform trained methods in MRI reconstruction.
problem Accelerated MRI reconstruction with minimal training data.
method Variation of Deep Decoder without training data.
result Un-trained approach significantly outperforms other methods in reconstruction accuracy.
This study uses CNN-IOs to estimate MRI image reconstruction performance bounds.
problem Estimating task-based performance limits for MRI image reconstruction methods.
method Utilized stylized multi-coil SENSE MRI systems and deep-generated stochastic models to estimate IO performance.
result Estimation of IO performance provides guidance for designing under-sampled MRI systems.
Bayesian framework learns prior from data to quantify uncertainty in MRI reconstruction.
problem Quantifying uncertainty in deep learning solutions for inverse problems.
method Adopting denoising score matching to learn prior from data, using it in an annealed Hamiltonian Monte-Carlo scheme.
result The approach yields high-quality reconstructions and assesses uncertainty on specific features.
Generative model learns object variability from MRI measurements.
problem Establishing stochastic object models from medical imaging data.
method Advanced AmbientGANs with multiresolution training.
result AmbientGANs reliably learn object distributions from incomplete or noisy data.
Voxelwise classification approaches are popular and effective methods for tissue quantification in brain magnetic resonance imaging (MRI) scans. However, generalization of these approaches is hampered by large differences between sets of MRI scans such as differences in field strength, vendor or acquisition protocols. …
This paper puts forth a novel bi-linear modeling framework for data recovery via manifold-learning and sparse-approximation arguments and considers its application to dynamic magnetic-resonance imaging (dMRI). Each temporal-domain MR image is viewed as a point that lies onto or close to a smooth manifold, and landmark …
Improved 3D MRI classification using contrastive learning with continuous proxy metadata.
problem Insufficient labelled data for 3D medical image classification.
method Proposed a new loss function (y-Aware InfoNCE) to leverage continuous proxy metadata in contrastive learning.
result 3D CNN model pre-trained on 10^4 multi-site healthy brain MRI scans outperforms fully-supervised methods.
Deep-learning model detects ASD from MRI data with high accuracy.
problem Challenges in diagnosing ASD due to subjective behavioral assessments and informant biases.
method Integrates deep-learning and SVM techniques to classify ASD brain scans.
result Highly accurate classification of ASD brain scans from neurotypical scans.
This study improves lung tumor segmentation in mice MRI scans with nnU-Net, reducing annotation needs.
problem Accurate lung tumor segmentation in mice MRI scans for drug discovery.
method Optimized nnU-Net 3D model for lung tumor segmentation with minimal annotations.
result nnU-Net 3D models outperform 2D models in MRI mice scans, requiring fewer annotations.
Study evaluates MRIQC pipeline's generalization on large multi-center datasets.
problem Generalizing MRI QC methods to new, unseen data.
method Evaluated MRIQC preprocessing steps on ABIDE and CATI datasets.
result Model without preprocessing yields best results on unseen data.
Accelerating Magnetic Resonance Imaging (MRI) by taking fewer measurements has the potential to reduce medical costs, minimize stress to patients and make MRI possible in applications where it is currently prohibitively slow or expensive. We introduce the fastMRI dataset, a large-scale collection of both raw MR measure…
New method optimizes MRI sampling patterns for faster scans.
problem Accelerate MRI scans without sacrificing image quality.
method Joint learning of adaptive sampling patterns and model-based recovery.
result Improved MR image quality compared to other methods.
SFCNeXt estimates brain age from small MRI datasets.
problem Efficiently estimating brain age from limited MRI data.
method Simple fully convolutional network (SFCNeXt) with SPEC and HRL.
result SFCNeXt outperforms complex models in small sample size scenarios.
A novel deep learning architecture (XmasNet) based on convolutional neural networks was developed for the classification of prostate cancer lesions, using the 3D multiparametric MRI data provided by the PROSTATEx challenge. End-to-end training was performed for XmasNet, with data augmentation done through 3D rotation a…