Study improves machine learning models for GI tract disease detection using comprehensive evaluations and cross-dataset testing.
problem Incomplete or incorrect evaluation of machine learning models for GI tract diseases.
method Comprehensive evaluations of five machine learning models using Global Features and Deep Neural Networks, introducing performance hexagons and cross-dataset testing.
result Demonstrates the need for more sophisticated performance metrics and evaluation methods to build generalizable models.
Hierarchical CNNs improve diagnosis of GI diseases from histopathological images.
problem Diagnosing GI diseases from histopathological images is challenging due to heterogeneity and shared features.
method Embedded a class hierarchy into a VGGNet to address the hierarchical structure of GI diseases.
result The hierarchical model achieved better results than a flat model for multi-category diagnosis of GI disorders.
In this paper, we present our approach for the 2018 Medico Task classifying diseases in the gastrointestinal tract. We have proposed a system based on global features and deep neural networks. The best approach combines two neural networks, and the reproducible experimental results signify the efficiency of the propose…
Purpose - Functional bowel diseases, including irritable bowel syndrome, chronic constipation, and chronic diarrhea, are some of the most common diseases seen in clinical practice. Many patients describe a range of triggers for altered bowel consistency and symptoms. However, characterization of the relationship betwee…
Geometric framework for aligning fiber tracts across subjects.
problem Challenges in finding direct tract correspondence across multiple individuals.
method Geometric framework using intrinsic mean and deformation fields, parallel transport for registration.
result Bundle alignment results on 43 healthy adult subjects.
Tract-specific diffusion measures, as derived from brain diffusion MRI, have been linked to white matter tract structural integrity and neurodegeneration. As a consequence, there is a large interest in the automatic segmentation of white matter tract in diffusion tensor MRI data. Methods based on the tractography are p…
Understanding how housing values evolve over time is important to policy makers, consumers and real estate professionals. Existing methods for constructing housing indices are computed at a coarse spatial granularity, such as metropolitan regions, which can mask or distort price dynamics apparent in local markets, such…
Study examines equity in post-Snow Uri recovery, finds disparities.
problem Disproportionate impacts on vulnerable populations during recovery.
method County and census tract level data analysis, satellite imagery, statistical procedures.
result Negative associations between non-Hispanic whites and outages, positive associations with certain demographic variables.
Paper aims to find joint representation between vocal tract geometry and speech sound acoustics.
problem Finding a joint latent representation between articulatory and acoustic domains for vowel sounds.
method Invertible neural network models, convolutional autoencoder, normalizing flows, semi-supervised learning.
result Satisfactory performance in articulatory-to-acoustic and acoustic-to-articulatory mapping.
The paper uses GIS data to predict urban sprawl.
problem Overgrowth and expansion of low-density areas with car dependency and segregation.
method Data mining algorithms (Apriori, J4.8) adapted for geospatial analysis using ArcGIS.
result Prototype spatial decision support system (SDSS) predicts urban sprawl and estimates impact variables.
Study develops a dynamic risk model for COVID-19 mortality using UK Biobank data.
problem Developing tools to monitor high-risk patients during the COVID-19 pandemic.
method Data-driven random forest classification model using baseline characteristics and symptoms.
result Model predicts COVID-19 mortality with excellent performance (AUC: 0.91), identifying novel predictors.
Study uses machine learning to identify IBD biomarkers from gut microbiota.
problem Identifying biomarkers for Inflammatory Bowel Disease (IBD) from gut microbiota.
method Ensemble feature selection methods (CMIM, FCBF, mRMR, XGBoost) applied to IBD-associated metagenomics dataset.
result XGBoost minimizes microbiota used for IBD diagnosis, improving classification accuracy.
A simple GI loss improves temporal generalization without complex methods.
problem Temporal drift between train and test distributions in evolving data.
method Gradient Interpolation (GI) loss to regularize temporal complexity.
result GI loss outperforms complex methods on real-world datasets.
Using a method introduced by R. Bamler to study the behavior of scalar curvature under continuous deformations of Riemannian metrics, we prove that if a sequence of smooth Riemannian metrics gi on a fixed compact manifold M has isotropic curvature bounded from below by a nonnegative function u, and if gi converge in C …
An online learning framework optimizes pricing and capacity in service systems.
problem Optimizing pricing and capacity in dynamic service systems.
method Gradient-based Online Learning in Queue (GOLiQ) framework.
result GOLiQ achieves logarithmic regret bound and improves service provider's performance.
Bayesian methods and their implementations by means of sophisticated Monte Carlo techniques have become very popular in signal processing over the last years. Importance Sampling (IS) is a well-known Monte Carlo technique that approximates integrals involving a posterior distribution by means of weighted samples. In th…
Dropout is used to avoid overfitting by randomly dropping units from the neural networks during training. Inspired by dropout, this paper presents GI-Dropout, a novel dropout method integrating with global information to improve neural networks for text classification. Unlike the traditional dropout method in which the…
Can we identify node labels from graph labels?
problem Identifying node labels from graph labels in a hierarchical network.
method Gaussian Mixture Graph Convolutional Network (GMGCN) with Graph Attention Network (GAT) and Gaussian Mixture Layer (GML).
result The proposed method outperforms other baselines on various benchmarks.
A killer of a group Gis an element that normally generates G. We show that the group of a cable knot contains infinitely many killers such that no two lie in the same automorphic orbit.
Researchers correct earlier work on surgeries of Gieseking's hyperbolic simplex manifold.
problem Incorrectly identified Gieseking's manifold as orbifolds, leading to a conflict with known theorems.
method Revised and completed the analysis of Dehn surgeries on Gieseking's manifold, identifying them as cone manifolds.
result Corrected the understanding of Gieseking's manifold, identifying it as cone manifolds and derived new orbifold series.
Study on queues with Hawkes arrivals, proving steady-state behavior and developing an efficient algorithm.
problem Analyzing the steady-state behavior of queues with Hawkes arrivals.
method Novel coupling techniques and exponential convergence results for workload and busy period processes.
result Exponential convergence of queueing processes to their stationary distribution.
This research enhances ML models using gradient information from neural networks.
problem Improving the accuracy of machine learning models.
method Leveraging gradients extracted from neural networks to improve model performance.
result Gradient information can effectively enhance machine learning models with existing datasets.
Paper proposes efficient multivariate spatial Fay-Herriot models using variational autoencoders.
problem Estimating population characteristics in small areas with limited data.
method Integrates multivariate spatial Fay-Herriot model with variational autoencoders to leverage spatial structure efficiently.
result Significant computational efficiency improvements for high-dimensional datasets.
Revises Schwarzschild manifold rigidity proof for spin manifolds.
problem Rigidity of Schwarzschild manifold for spin manifolds.
method Spinorial proof approach.
result Generalizes and includes classical and recent black hole uniqueness theorems.
This work is a further study on the Generalized Constraint Neural Network (GCNN) model [1], [2]. Two challenges are encountered in the study, that is, to embed any type of prior information and to select its imposing schemes. The work focuses on the second challenge and studies a new constraint imposing scheme for equa…
This paper examines the speaker identification potential of breath sounds in continuous speech. Speech is largely produced during exhalation. In order to replenish air in the lungs, speakers must periodically inhale. When inhalation occurs in the midst of continuous speech, it is generally through the mouth. Intra-spee…
SINF models transform arbitrary PDFs to target PDFs using 1D slices.
problem Transforming arbitrary probability distributions to target distributions efficiently.
method Iterative Optimal Transport of 1D slices, maximizing Wasserstein distance.
result SINF models generate high-quality samples and competitive density estimates.
New method provides reliable probabilistic bounds for VUR detection.
problem Detect VUR in children without radiation exposure.
method Machine learning with probabilistic bounds for conditional probability.
result Guaranteed bounds contain well-calibrated probabilities.
Let GI denote the space of all generic immersions of a surface F into a 3-manifold M. Let q(H_t) denote the number mod 2 of quadruple points of a generic regular homotopy H_t : F -> M. We are interested in defining an invariant Q : GI -> Z/2 such that q(H_t) = Q(H_0) - Q(H_1) for any generic regular homotopy H_t : F ->…
To accurately analyze changes of anatomical structures in longitudinal imaging studies, consistent segmentation across multiple time-points is required. Existing solutions often involve independent registration and segmentation components. Registration between time-points is used either as a prior for segmentation in a…
Exploration of hydrocarbon resources is a highly complicated and expensive process where various geological, geochemical and geophysical factors are developed then combined together. It is highly significant how to design the seismic data acquisition survey and locate the exploratory wells since incorrect or imprecise …
A faster Bayesian method for estimating spatial count data models.
problem Bayesian estimation of spatial count data models is computationally expensive and slow.
method Derive a Variational Bayes (VB) method for posterior inference in negative binomial models with spatial dependence.
result The VB method is up to 50 times faster than MCMC and offers similar accuracy.
We extend the well-known Denjoy-Ahlfors theorem on the number of different asymptotic tracts of holomorphic functions to subharmonic functions on arbitrary Riemannian manifolds. We obtain some new versions of the Liouville theorem for $\p$-harmonic functions without requiring the geodesic completeness requirement of a …
Bayesian hypergraph inference models disease pathways from EHR data.
problem Modeling rare diseases influenced by shared risk factors.
method Bayesian hypergraph inference framework reframing multi-disease modeling.
result Interpretable disease pathways and well-calibrated uncertainty quantification.
The paper uses graph learning to detect valid instruments in high-dimensional data for house pricing.
problem Endogeneity bias and invalid instrument validation in high-dimensional data.
method Merge variable selection algorithms and probabilistic graphs to estimate house prices and causal structure.
result Efficient data-driven instrument selection and invalid instrument purge in high-dimensional data.
Bayesian model identifies health disparities in disease progression.
problem Health disparities bias disease progression models.
method Interpretable Bayesian model accounting for three disparities.
result Model identifies and corrects for health disparities.
Elite ONNs learn better with synaptic plasticity, improving performance over CNNs.
problem Limited heterogeneity in ONNs due to fixed operator sets.
method Synaptic plasticity-based search for optimal operator sets.
result Elite ONNs achieve superior learning performance compared to conventional methods.
Disease phenotyping algorithms process observational clinical data to identify patients with specific diseases. Supervised phenotyping methods require significant quantities of expert-labeled data, while unsupervised methods may learn non-disease phenotypes. To address these limitations, we propose the Semi-Supervised …
Bayesian meta-learning predicts Alzheimer's disease progression.
problem Predicting individual Alzheimer's disease progression from limited data.
method Bayesian meta-learning approach that dynamically predicts disease score distributions.
result Bayesian meta-learner outperforms single-task models and deterministic meta-learners, especially for long-term predictions.
Clinical researchers use disease progression models to understand patient status and characterize progression patterns from longitudinal health records. One approach for disease progression modeling is to describe patient status using a small number of states that represent distinctive distributions over a set of obser…
It is crucial to provide compatible treatment schemes for a disease according to various symptoms at different stages. However, most classification methods might be ineffective in accurately classifying a disease that holds the characteristics of multiple treatment stages, various symptoms, and multi-pathogenesis. More…
Drug repositioning is an attractive cost-efficient strategy for the development of treatments for human diseases. Here, we propose an interpretable model that learns disease self-representations for drug repositioning. Our self-representation model represents each disease as a linear combination of a few other diseases…
Elucidating the genetic basis of human diseases is a central goal of genetics and molecular biology. While traditional linkage analysis and modern high-throughput techniques often provide long lists of tens or hundreds of disease gene candidates, the identification of disease genes among the candidates remains time-con…
Alzheimer's disease (AD) is a degenerative brain disease impairing a person's ability to perform day to day activities. The clinical manifestations of Alzheimer's disease are characterized by heterogeneity in age, disease span, progression rate, impairment of memory and cognitive abilities. Due to these variabilities, …
Deep Belief Network predicts lncRNA-disease associations with high accuracy.
problem Accurately identifying lncRNA-disease associations to understand lncRNA functionality and disease mechanism.
method Proposes a DBN-based model using heterogeneous networks and DBN for feature learning.
result Obtained AUC of 0.96 and AUPR of 0.967 on standard dataset.
Enhances disease progression modeling using LLMs for complex brain connectivity.
problem Inaccurate predictions of disease spread due to oversimplified brain connectivity models.
method Uses LLMs to synthesize multi-modal relationships and learn disease trajectories from longitudinal data.
result Superior prediction accuracy and interpretability compared to traditional methods.
For many complex diseases, there is a wide variety of ways in which an individual can manifest the disease. The challenge of personalized medicine is to develop tools that can accurately predict the trajectory of an individual's disease, which can in turn enable clinicians to optimize treatments. We represent an indivi…
A method to explain disease transformation using biomarker covariance matrices.
problem Understanding disease transformation from a healthy baseline.
method Modeling healthy and disease states of biomarker covariance matrices to characterize perturbations.
result Disease perturbs the biomarker covariance structure, allowing for mechanistic explanations and individual patient prognosis.