Proposes a new algorithm for learning continuous-time Bayesian network structures.
problem Lack of constraint-based algorithms for continuous-time Bayesian networks.
method Develops a constraint-based algorithm using statistical tests for conditional independence.
result The proposed algorithm is more accurate with variables having more than two values.
Continuous time Bayesian networks (CTBNs) describe structured stochastic processes with finitely many states that evolve over continuous time. A CTBN is a directed (possibly cyclic) dependency graph over a set of variables, each of which represents a finite state continuous time Markov process whose transition model is…
Markov jump processes and continuous time Bayesian networks are important classes of continuous time dynamical systems. In this paper, we tackle the problem of inferring unobserved paths in these models by introducing a fast auxiliary variable Gibbs sampler. Our approach is based on the idea of uniformization, and sets…
New CTBNs with clocks allow for non-exponential survival times.
problem Modeling phenomena with non-exponential survival times in continuous time.
method Introduced node-wise clocks to construct graph-coupled semi-Markov chains, enabling non-exponential survival times without auxiliary states.
result Parameter and structure inference algorithms provided, demonstrating advantages over current CTBN extensions.
New methods for inferring, predicting, and estimating continuous-time, discrete-event processes.
problem Inferring, predicting, and estimating entropy rate of continuous-time, discrete-event processes.
method Bayesian structural inference extended with neural networks.
result Methods are competitive for prediction and entropy-rate estimation with state-of-the-art.
Continuous time Bayesian networks are investigated with a special focus on their ability to express causality. A framework is presented for doing inference in these networks. The central contributions are a representation of the intensity matrices for the networks and the introduction of a causality measure. A new mode…
In many fields observations are performed irregularly along time, due to either measurement limitations or lack of a constant immanent rate. While discrete-time Markov models (as Dynamic Bayesian Networks) introduce either inefficient computation or an information loss to reasoning about such processes, continuous-time…
Proposes a new model for predicting chronic conditions over time.
problem Predicting complex relationships between multiple chronic conditions.
method Continuous time Bayesian network with adaptive regularization for structure and parameter learning.
result Proposed model provides sparse, intuitive representation of chronic condition relationships.
A new method for CT-DCEGs simplifies inference for asymmetric processes.
problem Inference in asymmetric state space problems with continuous time evolution.
method An extension of CEG propagation for CT-DCEGs, employing junction tree inference.
result CT-DCEGs are preferred over DBNs and continuous time BNs for asymmetric processes.
Continuous-time Bayesian networks (CTBNs) constitute a general and powerful framework for modeling continuous-time stochastic processes on networks. This makes them particularly attractive for learning the directed structures among interacting entities. However, if the available data is incomplete, one needs to simulat…
VSDN models sporadic time series with neural SDEs.
problem Modeling irregular and sparse time series data.
method Variational Bayesian method and neural SDEs.
result VSDNs outperform state-of-the-art models in prediction and interpolation.
Novel approach to learn CTBNs from data with minimal interventions.
problem Learning CTBNs from time-course data with limited resources.
method Variational approximation of expected information gain for experimental design.
result Semi-analytical expression for structure and parameter learning.
New method learns CTBN structures from incomplete data.
problem Learning CTBN structures from incomplete data is computationally infeasible.
method Gradient-based optimization of mixture weights combined with variational method.
result Scalable structure learning of CTBNs from incomplete data.
Modeling cascading behavior in complex systems using CTBNs.
problem Understanding which states trigger cascading events in complex systems.
method Continuous-time Bayesian networks (CTBNs) for modeling and identifying likely sentry states.
result Identification of likely sentry states that may lead to cascading behavior.
Continuous-time MBRL framework tackles control systems with Bayesian ODEs.
problem Discretization of continuous-time systems in MBRL.
method Novel actor-critic method with Bayesian ODEs for state inference.
result Model robust against irregular and noisy data, sample-efficient, solves challenging control problems.
We demonstrate that a number of sociology models for social network dynamics can be viewed as continuous time Bayesian networks (CTBNs). A sampling-based approximate inference method for CTBNs can be used as the basis of an expectation-maximization procedure that achieves better accuracy in estimating the parameters of…
Bayesian algorithm stabilizes unknown continuous-time systems from unstable data.
problem Learning and stabilizing unknown continuous-time systems with uncertain dynamics.
method Bayesian learning algorithm that learns from unstable data to stabilize the system in finite time.
result The algorithm stabilizes unknown continuous-time stochastic linear systems effectively after a short time period.
The thesis tackles structure learning and parameter estimation for PGMs using penalized maximum likelihood methods.
problem Recovering the true structure of probabilistic graphical models (PGMs) for decision-making and interpretation.
method Penalized maximum likelihood estimation with the LASSO penalty.
result The approach successfully recovers the true structure of PGMs, including Bayesian networks and continuous time Bayesian networks, for both complete and incomplete data.
Detects outliers in continuous-time event sequences, including unexpected absences and occurrences.
problem Identifying unexpected events in event sequences that may indicate abnormal situations.
method Developed methods based on Bayesian decision theory and hypothesis testing for context-aware outlier detection.
result Effective methods for detecting outliers in both synthetic and real-world data.
New method infers hidden states in continuous-time phenomena better than traditional models.
problem Traditional HSMM's are limited to discrete time grids and cannot handle irregularly spaced data.
method Formulated integro-differential forward and backward equations for CTSMC's, introduced scalable Viterbi-type algorithm.
result Efficiently solved equations for posterior marginals and path estimates.
New algorithm for continuous-time switching systems using variational inference.
problem Inference in time-series data with continuous-time switching systems.
method Developed a variational inference algorithm combining Gaussian process approximation and posterior inference for Markov jump processes.
result Bayesian latent state estimates and point estimates of unknown parameters for arbitrary points on the real axis.
The book covers scalable MCMC methods for Bayesian learning.
problem Scalability issues in Bayesian learning with large datasets.
method Advanced MCMC algorithms, including stochastic gradient, non-reversible, and continuous time methods.
result Substantial advances in practical and theoretical Bayesian computation.
Bayesian inference for biochemical reaction networks using jump-diffusion approximations.
problem Estimating hidden quantities in poorly characterized biochemical processes.
method Developed a Bayesian inference algorithm based on Markov chain Monte Carlo and sequential Monte Carlo methods.
result Numerical evaluation of the algorithm for a partially observed multi-scale birth-death process.
Bayesian Neural Nets improve model stability and fit.
problem Improving model stability and fit in time series prediction.
method Assign Bayesian Neural Nets to drift and diffusion terms of SDE, infer posterior using SGLD.
result Significantly improved stability and better model fit on benchmarks.
Paper solves Bayesian bandit problem with continuous-time limit and approximate policy.
problem Finding optimal policy in Bayesian bandit problems with large horizons.
method Reformulates Bayesian bandit problem as continuous Hamilton-Jacobi-Bellman (HJB) equation and proposes approximate Bayes-optimal policy.
result Approximate Bayes-optimal policy for large horizons with constant computational cost.
We study multistep Bayesian betting strategies in coin-tossing games in the framework of game-theoretic probability of Shafer and Vovk (2001). We show that by a countable mixture of these strategies, a gambler or an investor can exploit arbitrary patterns of deviations of nature's moves from independent Bernoulli trial…
NeuralSurv models survival analysis with Bayesian uncertainty.
problem Capturing time-varying risk relationships in survival analysis.
method Two-stage data-augmentation scheme, mean-field variational algorithm, coordinate-ascent updates, locally linearized Bayesian neural network.
result Delivers superior calibration compared to state-of-the-art models.
We present Ordinary Differential Equation Variational Auto-Encoder (ODE2VAE), a latent second order ODE model for high-dimensional sequential data. Leveraging the advances in deep generative models, ODE2VAE can simultaneously learn the embedding of high dimensional trajectories and infer arbitrarily complex conti…
CHIP model detects communities in continuous-time networks efficiently.
problem Detecting communities in large, timestamped networks.
method Spectral clustering on aggregated adjacency matrix of Hawkes process model.
result Consistent community detection for growing networks with efficient estimation.
This paper tackles Bayesian system identification with probabilistic numerical methods.
problem Accurately modeling nonlinear dynamic systems from noisy data.
method Probabilistic Sequential Monte Carlo (SMC) combined with probabilistic numerical integration.
result Efficient identification of latent states and system parameters from noisy measurements.
Nonlocal Bayesian modeling for continuous spatio-temporal dynamics
problem Handling irregular time points, sparse observations, and nonlocal interactions in spatio-temporal forecasting
method Hierarchical Bayesian framework with coordinate-based spatial basis expansion and continuous-time ODE
result Strong forecasting and uncertainty calibration
Continuous-time SGD converges under certain conditions, useful for deep learning.
problem Minimizing population expected loss in learning problems.
method Continuous-time approximation of stochastic gradient descent.
result Establishes sufficient conditions for convergence, applicable to overparametrized neural networks.
We consider the inverse Ising problem, i.e. the inference of network couplings from observed spin trajectories for a model with continuous time Glauber dynamics. By introducing two sets of auxiliary latent random variables we render the likelihood into a form, which allows for simple iterative inference algorithms with…
Bayesian method infers network topology and dynamics from noisy, sparse measurements.
problem Learning network topology and dynamics from partial, noisy data.
method Developed method uses dynamical structure functions derived from linear stochastic differential equations.
result Method outperforms state-of-the-art methods in various network types.
Generalizes PCA and ICA for continuous-time signals using neural networks.
problem Low-rank decomposition of continuous-time vector-valued signals.
method Implicit neural network framework to learn numerical approximations of PCA and ICA.
result Unified approach to PCA and ICA in continuous domain, enforcing decorrelation and independence.
Bayesian adversaries can outsmart traditional adversarial attacks.
problem Bayesian adversaries can manipulate machine learning models through small perturbations.
method Developed a continuous-time particle system (Abram) to approximate the gradient flow of the Bayesian adversarial robustness problem.
result Abram approximates the minimizer of the Bayesian adversarial robustness problem under certain assumptions.
FHRN uses continuous-time dynamics to stabilize reentrant neural computation.
problem Stabilizing reentrant neural computation.
method Formulated as a continuous-time neural-ODE system, revealing norm-regulated reentry.
result Achieves stable oscillatory trajectories through population-level gain modulation.
Continuous-time analysis shows SGD with noise prefers flat minima.
problem Optimizing neural networks using SGD with noise.
method Continuous-time model for SGD with noise analysis.
result Optimization prefers flat minima in certain noise regimes.
Bayesian Markowitz portfolio problem shows entropy regularization is ineffective.
problem Entropy regularization in Bayesian Markowitz portfolio optimization.
method Combines continuous-time Bayesian filtering with stochastic policy optimization.
result Entropy regularization does not accelerate learning of unknown drift.
Continuous-time Kyle model shows privacy subsidy from noise-perturbed order flow.
problem Quantifying break-even fees for committed-AMM exchanges under privacy-aggregated information.
method Extended Nakamura's (2026) single-period result to continuous-time, observing order flow perturbed by Brownian noise.
result Cumulative privacy subsidy is identified as equivalent to Loss-Versus-Rebalancing in price observation gap.
A method for predicting survival using neural networks for both continuous and discrete time.
problem Survival prediction for both continuous and discrete time data.
method Proposes a scheme for discretizing continuous-time data and two interpolation schemes for continuous-time survival estimates.
result The hazard rate parametrization of neural networks yields better performance than the parametrization of the probability mass function.
We consider continuous time Markovian processes where populations of individual agents interact stochastically according to kinetic rules. Despite the increasing prominence of such models in fields ranging from biology to smart cities, Bayesian inference for such systems remains challenging, as these are continuous tim…
Decision trees are flexible models that are well suited for many statistical regression problems. In a Bayesian framework for regression trees, Markov Chain Monte Carlo (MCMC) search algorithms are required to generate samples of tree models according to their posterior probabilities. The critical component of such an …
Recently there have been exciting developments in Monte Carlo methods, with the development of new MCMC and sequential Monte Carlo (SMC) algorithms which are based on continuous-time, rather than discrete-time, Markov processes. This has led to some fundamentally new Monte Carlo algorithms which can be used to sample f…
We consider the inverse problem of reconstructing the posterior measure over the trajec- tories of a diffusion process from discrete time observations and continuous time constraints. We cast the problem in a Bayesian framework and derive approximations to the posterior distributions of single time marginals using vari…
Neural models learn continuous-time Markov chain transition rates from data.
problem Learning transition rates for complex stochastic systems.
method Neural networks to model nonlinear transition rates from observed data.
result Neural models outperform traditional methods in accuracy.
New approach to portfolio optimization shows entropy regularization is ineffective.
problem Entropy regularization in mean-variance portfolio optimization under drift uncertainty.
method Combining Bayesian filtering and stochastic policy optimization.
result Entropy regularization does not accelerate learning about unknown drift.
A new sampler improves the inference of causal structures from observational data.
problem Inferring causal relationships from observational data when DAGs are Markov equivalent.
method Developed a non-reversible Markov chain, Causal Zig-Zag sampler, targeting Markov Equivalence Classes of DAGs.
result The sampler improves mixing and offers efficient algorithms for DAG inference.