Histopathology tissue samples are widely available in two states: paraffin-embedded unstained and non-paraffin-embedded stained whole slide RGB images (WSRI). Hematoxylin and eosin stain (H&E) is one of the principal stains in histology but suffers from several shortcomings related to tissue preparation, staining proto…
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48 results for “Biopsy Images”
Celiac Disease (CD) and Environmental Enteropathy (EE) are common causes of malnutrition and adversely impact normal childhood development. CD is an autoimmune disorder that is prevalent worldwide and is caused by an increased sensitivity to gluten. Gluten exposure destructs the small intestinal epithelial barrier, res…
Study proposes deep learning techniques to diagnose and differentiate Celiac Disease and Environmental Enteropathy from biopsy images.
problem Challenging histopathologic overlap between Celiac Disease and Environmental Enteropathy in biopsy images.
method Color balancing and Random Multimodel Deep Learning (RMDL) architecture to address staining variability.
result Proposed deep learning techniques improve diagnosis accuracy of Celiac Disease and Environmental Enteropathy.
A Convolutional Neural Network was used to predict kidney function in patients with chronic kidney disease from high-resolution digital pathology scans of their kidney biopsies. Kidney biopsies were taken from participants of the NEPTUNE study, a longitudinal cohort study whose goal is to set up infrastructure for obse…
A deep learning approach classifies medical images hierarchically.
problem Limitations of traditional supervised classifiers in medical image classification.
method Hierarchical Medical Image Classification (HMIC) using deep learning models.
result HMIC achieved better performance in classifying medical images hierarchically.
Capsule network improves polyp diagnosis accuracy.
problem Low accuracy of optical biopsy methods for polyps.
method D-Caps architecture with CAP method.
result 43% improvement over previous state-of-the-art.
Hierarchical CNNs improve diagnosis of GI diseases from histopathological images.
problem Diagnosing GI diseases from histopathological images is challenging due to heterogeneity and shared features.
method Embedded a class hierarchy into a VGGNet to address the hierarchical structure of GI diseases.
result The hierarchical model achieved better results than a flat model for multi-category diagnosis of GI disorders.
Mammography is the most effective and available tool for breast cancer screening. However, the low positive predictive value of breast biopsy resulting from mammogram interpretation leads to approximately 70% unnecessary biopsies with benign outcomes. Data mining algorithms could be used to help physicians in their dec…
Deep object detection improves mitotic nucleus detection in breast cancer biopsies.
problem Challenges in automated mitotic nucleus detection in breast cancer histopathological images.
method Adapted Mask R-CNN for deep object detection, initially selects candidate regions with maximum recall, refines them with multi-object loss function.
result Improved discrimination ability (F-score of 0.86) and significant precision (0.86) for mitotic nuclei compared to two-stage models.
Automatization of the diagnosis of any kind of disease is of great importance and it's gaining speed as more and more deep learning solutions are applied to different problems. One of such computer aided systems could be a decision support too able to accurately differentiate between different types of breast cancer hi…
An Overview of Melanoma Detection in Dermoscopy Images Using Image Processing and Machine Learningcs.CV
The incidence of malignant melanoma continues to increase worldwide. This cancer can strike at any age; it is one of the leading causes of loss of life in young persons. Since this cancer is visible on the skin, it is potentially detectable at a very early stage when it is curable. New developments have converged to ma…
In order to investigate the breast cancer prediction problem on the aging population with the grades of DCIS, we conduct a tree augmented naive Bayesian network experiment trained and tested on a large clinical dataset including consecutive diagnostic mammography examinations, consequent biopsy outcomes and related can…
Celiac Disease (CD) is a chronic autoimmune disease that affects the small intestine in genetically predisposed children and adults. Gluten exposure triggers an inflammatory cascade which leads to compromised intestinal barrier function. If this enteropathy is unrecognized, this can lead to anemia, decreased bone densi…
PersonalizedUS assesses breast cancer risk with local coverage guarantees.
problem Manual BI-RADS scoring leads to unnecessary biopsies and mental health burden.
method Conformal prediction for precise, personalized risk estimates.
result Local coverage guarantees with high sensitivity and specificity.
Machine learning classifies colorectal tissue using photoacoustic microscopy.
problem Traditional diagnostic methods for colorectal cancer are limited in detail and painful.
method Machine learning applied to acoustic resolution photoacoustic microscopy.
result Machine learning accurately classified benign and malignant tissue.
Study compares DL models for medical image segmentation, finds synergistic ensemble strategies improve performance.
problem Improving DL models for specialized medical image segmentation using transfer learning.
method Detailed comparisons of TII and LMI models for binary segmentation of medical images.
result Ensemble strategies improve performance by 10% in certain scenarios.
Robust cancer screening model using pre-trained ensembles for biomarkers.
problem Detecting early-stage cancer, especially in hard-to-diagnose cases like pancreatic cancer.
method Meta-trained Hyperfast model for robust classification, combined with ensembling of XGBoost and LightGBM.
result Achieved highest AUC of 0.9929 and robust performance on imbalanced datasets.
A two-layer neural network model that systematically includes correlations among input variables to arbitrary order and is designed to implement Bayes inference has been adapted to classify breast cancer tumors as malignant or benign, assigning a probability for either outcome. The inputs to the network represent measu…
Ability to quantify and predict progression of a disease is fundamental for selecting an appropriate treatment. Many clinical metrics cannot be acquired frequently either because of their cost (e.g. MRI, gait analysis) or because they are inconvenient or harmful to a patient (e.g. biopsy, x-ray). In such scenarios, in …
Proposes efficient data acquisition for personalized treatment effects from observational data.
problem Efficiently acquiring outcomes for personalized treatment effects in observational studies.
method Introduces causal, Bayesian acquisition functions to select points with overlapping support.
result Demonstrates improved sample efficiency and accuracy in learning personalized treatment effects.
In clinical practice and biomedical research, measurements are often collected sparsely and irregularly in time while the data acquisition is expensive and inconvenient. Examples include measurements of spine bone mineral density, cancer growth through mammography or biopsy, a progression of defective vision, or assess…
Method detects batch heterogeneity in genomic data.
problem Batch effects confound genomic diagnostics.
method Bayesian model evidence clustering.
result Detects batch effects without known labels.
A Pathology report is arguably one of the most important documents in medicine containing interpretive information about the visual findings from the patient's biopsy sample. Each pathology report has a retention period of up to 20 years after the treatment of a patient. Cancer registries process and encode high volume…
Background and Purpose: Biopsy is the main determinants of glioma clinical management, but require invasive sampling that fail to detect relevant features because of tumor heterogeneity. The purpose of this study was to evaluate the accuracy of a voxel-wise, multiparametric MRI radiomic method to predict features and d…
CatSIM measures image similarity robustly to small changes.
problem Measuring similarity between images, especially with small perturbations.
method Uses structural similarity image quality paradigm, robust to small location changes.
result Structural similarity between images rated higher when not entirely overlapping.
Develops statistical guarantees for image-to-image regression models.
problem Current image-to-image regression models lack statistical guarantees for model mistakes and hallucinations.
method Uncertainty quantification techniques with rigorous statistical guarantees for image-to-image regression problems.
result Derives uncertainty intervals around each pixel with formal mathematical guarantees.
AugurOne trains single image generators without GANs using image warps.
problem Training end-to-end single image generators without GANs.
method Non-affine augmentations of single input images for training an upscaling neural network.
result End-to-end training yields state-of-the-art performance on conditional generation tasks.
Transmission imaging, as an important imaging technique widely used in astronomy, medical diagnosis, and biology science, has been shown in [49] quite different from reflection imaging used in our everyday life. Understanding the structures of images (the prior information) is important for designing, testing, and choo…
A new metric FRD improves comparing medical images.
problem Comparing medical images for distribution or domain differences.
method Developed a new metric FRD using standardized radiomic features.
result FRD outperforms other metrics in various medical imaging applications.
This study investigates how much knowledge from natural images can be transferred to pathology images.
problem Quantifying how much knowledge from natural images can be transferred to pathology images.
method Proposes a framework to quantify knowledge gain by a particular layer, conducts empirical investigation in pathology image centered transfer learning.
result Early layers of deep models can transfer knowledge to pathology image classification tasks.
Generates high-resolution images from low-resolution inputs.
problem Generating realistic images from low-resolution inputs.
method Latent Adversarial Generator (LAG) using perceptual loss.
result Samples of high-resolution images from low-resolution inputs.
Computational ghost imaging is an imaging technique in which an object is imaged from light collected using a single-pixel detector with no spatial resolution. Recently, ghost cytometry has been proposed for a high-speed cell-classification method that involves ghost imaging and machine learning in flow cytometry. Ghos…
We study the theoretical properties of image denoising via total variation penalized least-squares. We define the total vatiation in terms of the two-dimensional total discrete derivative of the image and show that it gives rise to denoised images that are piecewise constant on rectangular sets. We prove that, if the t…
Content based image retrieval, a technique which uses visual contents of image to search images from large scale image databases according to users' interests. This paper provides a comprehensive survey on recent technology used in the area of content based face image retrieval. Nowadays digital devices and photo shari…
Latent feature models are attractive for image modeling, since images generally contain multiple objects. However, many latent feature models ignore that objects can appear at different locations or require pre-segmentation of images. While the transformed Indian buffet process (tIBP) provides a method for modeling tra…
A Set-Theoretic Study of the Relationships of Image Models and Priors for Restoration Problemseess.IV
The paper analyzes relationships between various image models for restoration.
problem Unclear relationships among popular image models for restoration.
method Theoretical analysis and experimental study of image models.
result Improved denoising performance by combining multiple image models.
StrokeCoder uses Transformers to generate images from single examples.
problem Creating diverse images from a single example.
method Transformer Neural Network learns from a single path-based example to generate a set of images.
result The model can generate a large set of deviated images that still represent the original image's style and concept.
Improved self-supervised learning for document images.
problem Performance of self-supervised pre-training on document images is poor.
method Proposed context-aware alternatives and a novel multi-modal method.
result Novel method outperforms other self-supervised methods on document image classification.
Generative Synthetic Augmentation using Label-to-Image Translation for Nuclei Image Segmentationcs.LG
This paper proposes synthetic augmentation for nuclei image segmentation in medical pathology.
problem Rare and time-consuming labeling of tumor nuclei images for semantic segmentation.
method Label-to-image translation to generate synthetic images.
result Synthetic augmentation improves segmentation accuracy.
Synthesizing images of the eye fundus is a challenging task that has been previously approached by formulating complex models of the anatomy of the eye. New images can then be generated by sampling a suitable parameter space. In this work, we propose a method that learns to synthesize eye fundus images directly from da…
OTRE uses OT to improve retinal images, outperforming existing methods.
problem Improving quality of non-mydriatic retinal images for accurate diagnoses.
method OT theory for image-to-image translation, regularization by enhancing.
result OTRE outperforms state-of-the-art methods on various retinal image tasks.
Method screens similar capsule endoscopic images, reducing doctor workload and improving accuracy.
problem Time-consuming and high error rate in manual inspection of large numbers of similar capsule endoscopic images.
method Structural similarity analysis of visually salient areas and hierarchical clustering.
result 76% reduction in similar images, 100% lesion recall, 18-minute average play time.
IAGAN method improves medical image reconstruction by incorporating adaptive GAN priors.
problem Reconstructing high-fidelity medical images from incomplete data.
method Image-adaptive GAN-based reconstruction method (IAGAN).
result IAGAN can recover fine structures relevant for medical diagnosis.
LcGAN generates synthetic CT images for hemorrhagic lesion segmentation.
problem Scarce training data for hemorrhagic lesion segmentation.
method Lesion conditional Generative Adversarial Network (LcGAN) for synthetic image generation.
result Segmentation improved by 12.8% with synthetic data augmentation.
Mapping Low-Resolution Images To Multiple High-Resolution Images Using Non-Adversarial Mappingeess.IV
SR-NAM maps low-res images to multiple high-res images realistically.
problem Mapping low-resolution images to multiple high-resolution images realistically.
method SR-NAM using Non-Adversarial Mapping (NAM) technique and a degradation model.
result Realistic degradation and down-sampling of high-resolution images.
Local differential privacy method protects image privacy in machine learning.
problem Protecting image privacy in machine learning models from data owners.
method Locally perturbs image representations before releasing them to the data user.
result Proposes DCAConv, an image feature extractor that maintains high data utility while preserving privacy.
Image denoising is always a challenging task in the field of computer vision and image processing. In this paper, we have proposed an encoder-decoder model with direct attention, which is capable of denoising and reconstruct highly corrupted images. Our model consists of an encoder and a decoder, where the encoder is a…
Adapts deep learning models trained on simulated images for use with real images.
problem Difficulty in training deep neural networks on large amounts of experimental data.
method Adversarial domain adaptation method to mitigate domain shift between simulated and experimental image data.
result Adversarial domain adaptation successfully mitigates domain shift and improves numerical observer performance.