Proposes a Bayesian Autoencoder with sparse Gaussian process priors to capture data correlations.
problem Autoencoders' i.i.d. assumption of latent representations fails to capture data correlations.
method Imposes fully Bayesian sparse Gaussian Process priors on the latent space of a Bayesian Autoencoder and uses stochastic gradient Hamiltonian Monte Carlo for posterior estimation.
result Consistently outperforms alternatives relying on Variational Autoencoders on various tasks.
Bayesian autoencoders discover physics from noisy data.
problem Challenges in identifying governing equations and coordinates from noisy, low-data real-world data.
method Bayesian SINDy autoencoders with hierarchical Bayesian sparsifying prior and adaptive empirical Bayesian method.
result Better physics discovery with lower data and fewer training epochs, along with valid uncertainty quantification.
Bayesian autoencoders improve OOD detection by addressing Bernoulli likelihood issues.
problem Out-of-distribution (OOD) detection fails with Bernoulli likelihood for certain datasets.
method Proposes Bayesian autoencoders and alternative likelihood models to fix the issue.
result Bayesian autoencoders and alternative likelihood models improve OOD detection accuracy.
Bayesian autoencoders quantify anomaly uncertainty for safer machine learning.
problem Lack of uncertainty quantification in autoencoders for anomaly detection.
method Formulated Bayesian autoencoders to quantify epistemic and aleatoric anomalies.
result Demonstrated effectiveness of BAEs on benchmark and real datasets.
Novel method for model selection in Bayesian autoencoders.
problem Model selection for Bayesian autoencoders.
method Prior hyper-parameter optimization using distributional sliced-Wasserstein distance.
result State-of-the-art results in small-data regimes.
Automatic Chemical Design is a framework for generating novel molecules with optimized properties. The original scheme, featuring Bayesian optimization over the latent space of a variational autoencoder, suffers from the pathology that it tends to produce invalid molecular structures. First, we demonstrate empirically …
LaMBO optimizes biological sequences using autoencoders and Bayesian optimization.
problem Bayesian optimization for drug design is limited by discrete, high-dimensional decision variables.
method Jointly trains denoising autoencoder with a Gaussian process head for gradient-based optimization in latent space.
result LaMBO outperforms genetic optimizers and requires no large pretraining corpus.
This work provides statistical guarantees for VAEs using PAC-Bayesian theory.
problem Theoretical properties of VAEs remain open questions.
method PAC-Bayesian theory to derive statistical guarantees.
result Upper bounds on Wasserstein distance between input and generative model.
Study uses machine learning to solve photoacoustic tomography's inverse problem.
problem Solving the full inverse problem in photoacoustic tomography.
method Developed an approach using variational autoencoders for Bayesian estimation of the posterior distribution.
result Evaluated the approach with numerical simulations and compared it to a Bayesian solution.
The paper proposes using Autoencoders to learn summary statistics for Bayesian inference.
problem Approximating posterior distributions for models with intractable likelihood functions.
method Using Autoencoders to extract summary statistics that retain parameter information and cancel noise.
result The approach effectively learns summary statistics that improve posterior approximation.
Bayesian model updating uses VAEs to approximate likelihood with small data.
problem Approximating likelihood for small data sets in structural analysis.
method Uses multimodal VAEs to approximate likelihood, suitable for high-dimensional correlated observations.
result Demonstrates computational efficiency and accuracy compared to original VAE approach.
Review of priors in Bayesian deep learning models.
problem The importance of prior choices in Bayesian deep learning models.
method Overview of different priors and methods of learning priors from data.
result Motivate practitioners to think carefully about prior specification.
Autoencoders and their variations provide unsupervised models for learning low-dimensional representations for downstream tasks. Without proper regularization, autoencoder models are susceptible to the overfitting problem and the so-called posterior collapse phenomenon. In this paper, we introduce a quantization-based …
The problem of estimating event truths from conflicting agent opinions in a social network is investigated. An autoencoder learns the complex relationships between event truths, agent reliabilities and agent observations. A Bayesian network model is proposed to guide the learning process by modeling the relationship of…
Automates VI divergence selection for efficient few-shot learning.
problem Efficiently selecting divergence measures for VI to improve performance.
method Meta-learning algorithm to learn optimal divergence metric and variational parameter initialization.
result Meta-learning approach outperforms standard VI methods across various tasks.
We extend Stochastic Gradient Variational Bayes to perform posterior inference for the weights of Stick-Breaking processes. This development allows us to define a Stick-Breaking Variational Autoencoder (SB-VAE), a Bayesian nonparametric version of the variational autoencoder that has a latent representation with stocha…
New algorithm speeds up Bayesian UQ for high-dimensional inverse problems.
problem Computational inefficiency in Bayesian inference for high-dimensional inverse problems.
method Deep neural network-based autoencoder for dimension reduction and emulation phase.
result Computational efficiency up to three orders of magnitude with scalable Bayesian UQ.
Bayesian methods improve OoD detection in deep networks.
problem Detecting Out-of-Distribution (OoD) inputs in deep neural networks.
method Three Bayesian inference approaches applied to VAE weights.
result Improved OoD detection scores over benchmarks.
Develops a flexible deep autoencoding topic model with scalable hybrid Bayesian inference.
problem Flexible and interpretable document analysis models.
method DATM with hybrid Bayesian inference, including topic-layer-adaptive stochastic gradient Riemannian MCMC and Weibull variational encoder.
result Demonstrates scalability and efficacy on big corpora in unsupervised and supervised learning tasks.
Item response theory (IRT) is a non-linear generative probabilistic paradigm for using exams to identify, quantify, and compare latent traits of individuals, relative to their peers, within a population of interest. In pre-existing multidimensional IRT methods, one requires a factorization of the test items. For this t…
GABI learns geometry from diverse systems to improve Bayesian inference.
problem Bayesian inversion of physical systems with varying geometries.
method Geometric Autoencoders for Bayesian Inversion (GABI) learns geometry-aware priors from large datasets.
result GABI yields comparable predictive accuracy to deterministic methods and well-calibrated uncertainty quantification.
Paper proposes Coalitional BAE to improve explainability of unsupervised deep learning models.
problem Improving explainability of Autoencoder's predictions.
method Introduces Coalitional BAE, inspired by agent-based system theory, to reduce correlation in explanations.
result Improved quality of explanations using Coalitional BAE on publicly available datasets.
Probabilistic Autoencoder learns latent space weights' distribution.
problem Nonlinear model reconstruction error and sample quality.
method Normalizing flow for latent space weights' probability distribution.
result PAE achieves small reconstruction errors, high sample quality, and good performance.
Extends VAEs to handle complex Bayesian network structures.
problem Handling complex dependency structures in Bayesian networks.
method Extends VAEs with graphical residual flows to model arbitrary dependency structures.
result Demonstrates improved performance on synthetic datasets.
VAE improves MCMC efficiency by generating diverse prior proposals.
problem Inefficient MCMC methods in Bayesian inverse problems, especially subsurface flow modeling.
method Uses Variational Autoencoder (VAE) to generate broader-spectrum prior proposals.
result VAE achieves comparable accuracy to Karhunen-Loève Expansion (KLE) and outperforms it when correlation length is unknown.
TALBO optimizes latent spaces for evolving design objectives.
problem Temporal drift in design objectives.
method GP-prior variational autoencoder for time-varying latent space.
result Consistently outperforms LSBO baselines across varying drift speeds and objectives.
Enhances generative models stability and accuracy with BNPL, WMMD, and triple model.
problem Overfitting in GANs and noisy samples in VAEs.
method Bayesian non-parametric learning framework, integrating Wasserstein distance and maximum mean discrepancy.
result Superior performance across various generative tasks.
Clarifies EM algorithm and variational Bayesian inference concepts.
problem Gaps in AI literature understanding of EM and variational concepts.
method Tutorial presentation of EM algorithm, variational Bayesian inference, and autoencoded variational Bayes.
result Establishes clear links between EM and variational methods.
The recently developed variational autoencoders (VAEs) have proved to be an effective confluence of the rich representational power of neural networks with Bayesian methods. However, most work on VAEs use a rather simple prior over the latent variables such as standard normal distribution, thereby restricting its appli…
Optimizes VAE hyperparameters for efficient training and manifold discovery.
problem Efficiently optimizing hyperparameters in VAEs for complex data.
method Latent Bayesian Optimization (zBO) for hyperparameter trajectory optimization.
result Demonstrated improved performance in finding joint rotationally invariant representations.
Graph structured data are abundant in the real world. Among different graph types, directed acyclic graphs (DAGs) are of particular interest to machine learning researchers, as many machine learning models are realized as computations on DAGs, including neural networks and Bayesian networks. In this paper, we study dee…
Survey of GANs and autoencoders, addressing mode collapse and likelihood issues.
problem Addressing mode collapse and likelihood issues in GANs and autoencoders.
method Explains various GAN and autoencoder variants, their applications, and methods to resolve issues.
result Various methods to resolve mode collapse and improve likelihood in GANs and autoencoders.
New approach separates VAE and GP for better molecular optimisation.
problem Optimizing complex structured domains like molecular spaces using VAEs.
method Decouples VAE for structure generation and GP for predictive modelling, combining them with a Bayesian update rule.
result Improves identification of high-potential candidates in molecular optimisation.
LOL-BO improves latent space Bayesian optimization over structured inputs.
problem Optimizing complex functions over high-dimensional, structured search spaces.
method Adapting trust regions from high-dimensional to structured settings, using a DAE to map inputs into a latent space.
result Achieves up to 20x improvement over state-of-the-art methods.
In Bayesian machine learning, the posterior distribution is typically computationally intractable, hence variational inference is often required. In this approach, an evidence lower bound on the log likelihood of data is maximized during training. Variational Autoencoders (VAE) are one important example where variation…
Despite their successes, deep neural networks may make unreliable predictions when faced with test data drawn from a distribution different to that of the training data, constituting a major problem for AI safety. While this has recently motivated the development of methods to detect such out-of-distribution (OoD) inpu…
In recent years Variation Autoencoders have become one of the most popular unsupervised learning of complicated distributions.Variational Autoencoder (VAE) provides more efficient reconstructive performance over a traditional autoencoder. Variational auto enocders make better approximaiton than MCMC. The VAE defines a …
VampPrior Mixture Model improves clustering in DLVMs.
problem Simplicity of standard priors in DLVMs leads to poor clustering performance.
method Leverages VampPrior concepts to fit a Bayesian GMM prior in a VAE.
result VMM achieves highly competitive clustering performance on benchmark datasets.
A new method maps high-dimensional Bayesian inverse problems to lower dimensions.
problem High-dimensional Bayesian inverse problems with complex prior information.
method Data-driven VAE prior and KRnet map for posterior approximation in latent space.
result Efficiently reduces computational cost and approximates posterior distributions.
This paper introduces Wasserstein variational inference, a new form of approximate Bayesian inference based on optimal transport theory. Wasserstein variational inference uses a new family of divergences that includes both f-divergences and the Wasserstein distance as special cases. The gradients of the Wasserstein var…
In just three years, Variational Autoencoders (VAEs) have emerged as one of the most popular approaches to unsupervised learning of complicated distributions. VAEs are appealing because they are built on top of standard function approximators (neural networks), and can be trained with stochastic gradient descent. VAEs …
The paper studies conditions for exact posterior modeling in Bayesian networks.
problem Exact modeling of posterior distributions in Bayesian networks.
method Derives conditions for a recognition network to model the true posterior distribution exactly.
result Perfectness of the recognition network is crucial for local conditions to hold.
PriorCVAE uses deep generative models to infer hyperparameters in MCMC.
problem Losing hyperparameter information in GP prior inference.
method Conditioning VAE on hyperparameters to encode and estimate them during inference.
result PriorCVAE enables efficient and distinct inference of hyperparameters.
This work combines machine learning with physical models to solve inverse problems efficiently.
problem Solving inverse problems in the presence of missing physics and recovering parameters.
method Variational autoencoding with a physically structured decoder network and stochastic local approximations.
result The method accelerates inference for Bayesian inverse problems and acts as a regularizer encoding prior physical information.
Deep neural networks are complex and opaque. As they enter application in a variety of important and safety critical domains, users seek methods to explain their output predictions. We develop an approach to explaining deep neural networks by constructing causal models on salient concepts contained in a CNN. We develop…
Probabilistic deep learning uses neural networks and models to handle uncertainty.
problem Handling uncertainty in deep learning models.
method Two approaches: probabilistic neural networks and deep probabilistic models.
result TensorFlow Probability library supports both approaches.
Bayesian deep learning faces posterior collapse due to likelihood vs. prior competition.
problem Posterior collapse in Bayesian deep learning models.
method Identified competition between likelihood and prior regularization in a linear latent variable model.
result Posterior collapse is related to neural and dimensional collapse, suggesting a broader learning issue.
Matrix factorization (MF) has been widely applied to collaborative filtering in recommendation systems. Its Bayesian variants can derive posterior distributions of user and item embeddings, and are more robust to sparse ratings. However, the Bayesian methods are restricted by their update rules for the posterior parame…