Machine learning speeds up the construction of virus assembly fitness landscapes.
arXiv research
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Study of influenza A virus spread using mathematical equations.
Enhanced Zika spread forecasting using topological data analysis.
Study assesses sugar beet yields under EU's neonicotinoids ban and climate change.
MutaGAN predicts mutations of evolving protein populations using GANs.
For every strong coarse homology theory we construct a coarse assembly map as a natural transformation between coarse homology theories. We provide various conditions implying that this assembly map is an equivalence. These results generalize known results for the analytic coarse assembly map for K-homology to general …
Model predicts composite structures assembly quality with input uncertainty.
Survey on metrics and assembly maps in positive scalar curvature.
Multi-scanner Antivirus systems provide insightful information on the nature of a suspect application; however there is often a lack of consensus and consistency between different Anti-Virus engines. In this article, we analyze more than 250 thousand malware signatures generated by 61 different Anti-Virus engines after…
If a Lie algebra structures $\gG$ on a vector space is the sum of a family of mutually compatible Lie algebra structures $\gG_i$, we say that $\gG$ is \emph{simply assembled} from $\gG_s$'s. By repeating this procedure several times one gets a family of Lie algebras \emph{assembled} from $\gG_s$'s. The central result o…
We construct the geometric Baum-Connes assembly map for twisted Lie groupoids, that means for Lie groupoids together with a given groupoid equivariant principle bundle. The construction is based on the use of geometric deformation groupoids, these objects allow in particular to give a geometric construction of …
Study assesses linear classifiers for virus genotyping and subtyping.
New testing method quantifies ML vs AV robustness against evasion.
We study in this paper the maximal version of the coarse Baum-Connes assembly map for families of expanding graphs arising from residually finite groups. Unlike for the usual Roe algebra, we show that this assembly map is closely related to the (maximal) Baum-Connes assembly map for the group and is an isomorphism for …
Semi-supervised deep learning detects problematic reads for genome assembly.
Study recovers neuron assemblies from cognitive data using tensor decomposition.
Controlled -theory is used to show that algebraic -theory of virtually abelian groups is described by an assembly map defined using possibly-infinite hyperelementary subgroups. The Farrell-Jones summand (coming from infinite subgroups) is parameterized by the rational projective space of the group, and a reduced …
If a Lie algebra structure g on a vector space is the sum of a family of mutually compatible Lie algebra structures g_i's, we say that g is simply assembled from the g_i's. Repeating this procedure with a number of Lie algebras, themselves simply assembled from the g_i's, one obtains a Lie algebra assembled in two step…
We use assembly maps to study , the topological cyclic homology at a prime of the group algebra of a discrete group with coefficients in a connective ring spectrum . For any finite group, we prove that the assembly map for the family of cyclic subgroups is an isomorphis…
A framework for generating 3D shapes by sequentially assembling primitives.
Avian Influenza breakouts cause millions of dollars in damage each year globally, especially in Asian countries such as China and South Korea. The impact magnitude of a breakout directly correlates to time required to fully understand the influenza virus, particularly the interspecies pathogenicity. The procedure requi…
In this article, we introduce the notion of a functor on coarse spaces being coarsely excisive- a coarse analogue of the notion of a functor on topological spaces being excisive. Further, taking cones, a coarsely excisive functor yields a topologically excisive functor, and for coarse topological spaces there is an ass…
Defines and computes geometric pairings for discrete groups using Baum-Connes assembly map.
Model for assembly map of bordism-invariant functors.
Optimizes lockdown strategies to balance economic activities and virus spread.
The application of machine learning to bioinformatics problems is well established. Less well understood is the application of bioinformatics techniques to machine learning and, in particular, the representation of non-biological data as biosequences. The aim of this paper is to explore the effects of giving amino acid…
Model detects patterns in noisy binary data, explaining neuron activity in terms of cell assemblies.
We construct a higher Whitehead torsion map, using algebraic K-theory of spaces, and show that it satisfies the usual properties of the classical Whitehead torsion. This is used to describe a "geometric assembly map" defined on stabilized structure spaces in purely homotopy theoretic terms.
BEAN models neuronal correlations to create interpretable representations.
In this paper we introduce a homotopy theoretic technique for proving that the -theoretic assembly map is an equivalence. It is an extension of the methods used to prove split injectivity of the assembly and applies to any geometrically finite group. Our result is that there are two requirements which need to hold. …
Easy-to-assemble 3D model of Boy's surface.
Bayesian calibration for BCP self-assembly models using image data and measure transport.
Between the category of exact metric spaces with bounded geometry (about which much is known) and the larger category of arbitrary exact metric spaces (about which little is known) lies the intermediate category of asymptotically exact metric spaces. We show that the coarse Baum-Connes assembly map is naturally split s…
Financial contagion spreads through international relations, posing systemic risk.
Noisy Pooled PCR tests large groups more efficiently.
In this paper, the first of a series of two, we continue the study of higher index theory for expanders. We prove that if a sequence of graphs is an expander and the girth of the graphs tends to infinity, then the coarse Baum-Connes assembly map is injective, but not surjective, for the associated metric space . Exp…
New proof of index theorem for topological manifold bundles.
This paper provides a full controlled version of algebraic -theory. This includes a rich array of assembly maps; the controlled assembly isomorphism theorem identifying the controlled group with homology; and the stability theorem describing the behavior of the inverse limit as the control parameter goes to 0. There…
We prove that the Farrell-Jones assembly map for connective algebraic K-theory is rationally injective, under mild homological finiteness conditions on the group and assuming that a weak version of the Leopoldt-Schneider conjecture holds for cyclotomic fields. This generalizes a result of Bökstedt, Hsiang, and Madsen, …
This paper studies how modular agents can learn to control complex morphologies.
DeepVir uses deep matrix factorization to predict antivirals for COVID-19.
This paper automates mining of COVID-19 scholarly articles using machine learning.
Paper proposes neural networks for automatically naming assembly functions.
Study uses multi-agent reinforcement learning to control self-assembly with high-resolution external control.
Analyzes semi-characteristics on specific manifolds, proving a vanishing theorem.
This study analyzes the effects of lifting lockdowns on Brazil's COVID-19 spread.
This paper tackles efficient testing strategies for COVID-19 by using a partially observable MDP approach.
The aim of this paper is to construct a natural Riemann-Lagrange differential geometry on 1-jet spaces, in the sense of nonlinear connections, generalized Cartan connections, d-torsions, d-curvatures, jet electromagnetic fields and jet electromagnetic Yang-Mills energies, starting from some given nonlinear evolution OD…