Variational autoencoders learn unsupervised data representations, but these models frequently converge to minima that fail to preserve meaningful semantic information. For example, variational autoencoders with autoregressive decoders often collapse into autodecoders, where they learn to ignore the encoder input. In th…
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This paper analyzes speculative decoding, a method to speed up large language model inferences.
DD-VAE uses deterministic decoding for better latent code utilization in discrete data.
Improved VAE models avoid posterior collapse in text modeling.
We present RL-VAE, a graph-to-graph variational autoencoder that uses reinforcement learning to decode molecular graphs from latent embeddings. Methods have been described previously for graph-to-graph autoencoding, but these approaches require sophisticated decoders that increase the complexity of training and evaluat…
Bidirectional VAE reduces parameters and improves image tasks.
A new method for effective VAE training using calibrated decoders.
Improved GP decoder training with SAS approximations.
BS-VAE separates decoder variance and beta to improve VAE performance.
As a technology to read brain states from measurable brain activities, brain decoding are widely applied in industries and medical sciences. In spite of high demands in these applications for a universal decoder that can be applied to all individuals simultaneously, large variation in brain activities across individual…
VED framework learns low-dimensional latent representations of physical systems.
Study efficient neural operator learning using variation spaces.
Parallelizes autoregressive generation using VSSM.
PH-VAE models heavy-tailed data with flexible Phase-Type distributions.
The (variational) graph auto-encoder and its variants have been popularly used for representation learning on graph-structured data. While the encoder is often a powerful graph convolutional network, the decoder reconstructs the graph structure by only considering two nodes at a time, thus ignoring possible interaction…
A new model captures variability in time series data.
The variational autoencoder (VAE) is a generative model with continuous latent variables where a pair of probabilistic encoder (bottom-up) and decoder (top-down) is jointly learned by stochastic gradient variational Bayes. We first elaborate Gaussian VAE, approximating the local covariance matrix of the decoder as an o…
Learning a generative model from partial data (data with missingness) is a challenging area of machine learning research. We study a specific implementation of the Auto-Encoding Variational Bayes (AEVB) algorithm, named in this paper as a Variational Auto-Decoder (VAD). VAD is a generic framework which uses Variational…
A key advance in learning generative models is the use of amortized inference distributions that are jointly trained with the models. We find that existing training objectives for variational autoencoders can lead to inaccurate amortized inference distributions and, in some cases, improving the objective provably degra…
We introduce the Mutual Information Machine (MIM), a novel formulation of representation learning, using a joint distribution over the observations and latent state in an encoder/decoder framework. Our key principles are symmetry and mutual information, where symmetry encourages the encoder and decoder to learn differe…
While the impact of variational inference (VI) on posterior inference in a fixed generative model is well-characterized, its role in regularizing a learned generative model when used in variational autoencoders (VAEs) is poorly understood. We study the regularizing effects of variational distributions on learning in ge…
Spatially-sparse predictors are good models for brain decoding: they give accurate predictions and their weight maps are interpretable as they focus on a small number of regions. However, the state of the art, based on total variation or graph-net, is computationally costly. Here we introduce sparsity in the local neig…
Learning in the latent variable model is challenging in the presence of the complex data structure or the intractable latent variable. Previous variational autoencoders can be low effective due to the straightforward encoder-decoder structure. In this paper, we propose a variational composite autoencoder to sidestep th…
MDMs train to decode tokens in a random order, which affects performance; we show they can be optimized for a favorable order.
Additive decoders tackle latent variables and image generation.
EB-VAE combines tumor growth and dropout data for personalized treatment response modeling.
Variational Autoencoder (VAE), a simple and effective deep generative model, has led to a number of impressive empirical successes and spawned many advanced variants and theoretical investigations. However, recent studies demonstrate that, when equipped with expressive generative distributions (aka. decoders), VAE suff…
SOS-VAE improves generative models for scientific applications by correcting decoder bias.
This paper proposes a non-parallel many-to-many voice conversion (VC) method using a variant of the conditional variational autoencoder (VAE) called an auxiliary classifier VAE (ACVAE). The proposed method has three key features. First, it adopts fully convolutional architectures to construct the encoder and decoder ne…
In this draft, which reports on work in progress, we 1) adapt the information bottleneck functional by replacing the compression term by class-conditional compression, 2) relax this functional using a variational bound related to class-conditional disentanglement, 3) consider this functional as a training objective for…
In "extreme" computational imaging that collects extremely undersampled or noisy measurements, obtaining an accurate image within a reasonable computing time is challenging. Incorporating image mapping convolutional neural networks (CNN) into iterative image recovery has great potential to resolve this issue. This pape…
For reliable transmission across a noisy communication channel, classical results from information theory show that it is asymptotically optimal to separate out the source and channel coding processes. However, this decomposition can fall short in the finite bit-length regime, as it requires non-trivial tuning of hand-…
Paper models spatio-temporal extremes using conditional variational autoencoders.
We prove that the evidence lower bound (ELBO) employed by variational auto-encoders (VAEs) admits non-trivial solutions having constant posterior variances under certain mild conditions, removing the need to learn variances in the encoder. The proof follows from an unexpected journey through an array of topics: the clo…
CSLVAE generates large chemical libraries efficiently.
Deep generative models have been praised for their ability to learn smooth latent representation of images, text, and audio, which can then be used to generate new, plausible data. However, current generative models are unable to work with molecular graphs due to their unique characteristics-their underlying structure …
A new model trains prior and encoder/decoder networks simultaneously for efficient generation.
Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution observed in training data. We propose a variational autoencoder model in which bo…
Cactus improves auto-regressive decoding speed without sacrificing quality.
For bidirectional joint image-text modeling, we develop variational hetero-encoder (VHE) randomized generative adversarial network (GAN), a versatile deep generative model that integrates a probabilistic text decoder, probabilistic image encoder, and GAN into a coherent end-to-end multi-modality learning framework. VHE…
Graph autoencoders (AE) and variational autoencoders (VAE) are powerful node embedding methods, but suffer from scalability issues. In this paper, we introduce FastGAE, a general framework to scale graph AE and VAE to large graphs with millions of nodes and edges. Our strategy, based on an effective stochastic subgraph…
Deep generative models have been wildly successful at learning coherent latent representations for continuous data such as video and audio. However, generative modeling of discrete data such as arithmetic expressions and molecular structures still poses significant challenges. Crucially, state-of-the-art methods often …
We present a simple neural rendering architecture that helps variational autoencoders (VAEs) learn disentangled representations. Instead of the deconvolutional network typically used in the decoder of VAEs, we tile (broadcast) the latent vector across space, concatenate fixed X- and Y-"coordinate" channels, and apply a…
EnVAE uses energy score for likelihood-free VAEs, improving image reconstructions.
This paper presents a simulator-assisted training method (SimVAE) for variational autoencoders (VAE) that leads to a disentangled and interpretable latent space. Training SimVAE is a two-step process in which first a deep generator network(decoder) is trained to approximate the simulator. During this step, the simulato…
New method controls posterior collapse in VAEs with theoretical guarantees.
Constructing powerful generative models for natural images is a challenging task. PixelCNN models capture details and local information in images very well but have limited receptive field. Variational autoencoders with a factorial decoder can capture global information easily, but they often fail to reconstruct detail…
It is well established that temporal organization is critical to memory, and that the ability to temporally organize information is fundamental to many perceptual, cognitive, and motor processes. While our understanding of how the brain processes the spatial context of memories has advanced considerably, our understand…