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arXiv research

A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

168,694 papers · 148 categories

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51102153204 · Jun 202019922001200920172026
48 results for tree edit distance

Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart. Recent research has demonstrated that metric learning approaches can also be applied to trees, such as m…

2018-06-13abs ↗pdf ↗

Many machine learning models can be attacked with adversarial examples, i.e. inputs close to correctly classified examples that are classified incorrectly. However, most research on adversarial attacks to date is limited to vectorial data, in particular image data. In this contribution, we extend the field by introduci…

2019-08-25abs ↗pdf ↗

Edit distance, also known as Levenshtein distance, is an essential way to compare two strings that proved to be particularly useful in the analysis of genetic sequences and natural language processing. However, edit distance is a discrete function that is known to be hard to optimize. This fact hampers the use of this …

2019-04-29abs ↗pdf ↗

RS-Del provides robustness for sequence classifiers against edit distance attacks.

problem Certifying robustness of discrete sequence classifiers against edit distance attacks.
method Randomized deletion (RS-Del) for discrete sequence classifiers, focusing on edit distance-bounded adversaries.
result Achieved a certified accuracy of 91% at an edit distance radius of 128 bytes on malware detection.

The crucial importance of metrics in machine learning algorithms has led to an increasing interest in optimizing distance and similarity functions, an area of research known as metric learning. When data consist of feature vectors, a large body of work has focused on learning a Mahalanobis distance. Less work has been …

2013-07-17abs ↗pdf ↗

We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit distance for Reeb graphs and prove that it is stable and universal, meaning that it pr…

2018-01-05abs ↗pdf ↗

Differentially private data structures for estimating distances between strings.

problem Estimating distances between query strings and database strings while ensuring privacy.
method Proposes differentially private data structures for Hamming and edit distances using randomized response technique.
result Efficient data structures that provide accurate distance estimates with strong privacy guarantees.

We present Optimal Completion Distillation (OCD), a training procedure for optimizing sequence to sequence models based on edit distance. OCD is efficient, has no hyper-parameters of its own, and does not require pretraining or joint optimization with conditional log-likelihood. Given a partial sequence generated by th…

2018-10-02abs ↗pdf ↗

We propose a new anytime hierarchical clustering method that iteratively transforms an arbitrary initial hierarchy on the configuration of measurements along a sequence of trees we prove for a fixed data set must terminate in a chain of nested partitions that satisfies a natural homogeneity requirement. Each recursive …

2014-04-13abs ↗pdf ↗

We introduce GSimCNN (Graph Similarity Computation via Convolutional Neural Networks) for predicting the similarity score between two graphs. As the core operation of graph similarity search, pairwise graph similarity computation is a challenging problem due to the NP-hard nature of computing many graph distance/simila…

2018-10-23abs ↗pdf ↗

We introduce the problem of learning distributed representations of edits. By combining a "neural editor" with an "edit encoder", our models learn to represent the salient information of an edit and can be used to apply edits to new inputs. We experiment on natural language and source code edit data. Our evaluation yie…

2018-10-31abs ↗pdf ↗

ED-NeRF efficiently edits 3D scenes using latent space NeRF and improved loss functions.

problem Slow training speeds and inadequate editing loss functions in existing NeRF editing techniques.
method Embedding real-world scenes into latent space of LDM, using a unique refinement layer and an improved loss function.
result ED-NeRF achieves faster editing speed and improved output quality compared to state-of-the-art models.

Improves generative models by optimizing rewards and sample editing.

problem Efficiently generating high-reward samples with structural constraints.
method Introduces MDM-VGB, a discrete diffusion sampler that augments unmasking generation with reward-guided remasking.
result MDM-VGB achieves quadratic complexity and robustness to noise, outperforming heuristics like best-of-NN.

We present a new, efficient method for automatically detecting severe conflicts `edit wars' in Wikipedia and evaluate this method on six different language WPs. We discuss how the number of edits, reverts, the length of discussions, the burstiness of edits and reverts deviate in such pages from those following the gene…

2011-07-19abs ↗pdf ↗

The paper tightens bounds on distances between Reeb graphs.

problem Certifying quasi-universality of distances between Reeb graphs.
method Establishes tight bi-Lipschitz bounds for various distances.
result Proves strict universality of the functional contortion distance for contour trees and coincides with interleaving distance for merge trees.

funcGNN uses graph neural networks to estimate program similarity efficiently.

problem Estimating accurate program similarity for software engineering tasks.
method funcGNN trains on labeled CFG pairs to predict GED between unseen programs using effective embedding vectors.
result funcGNN achieves lower error rate (0.00194) and is 23 times faster than traditional methods.

As the number of contributors to online peer-production systems grows, it becomes increasingly important to predict whether the edits that users make will eventually be beneficial to the project. Existing solutions either rely on a user reputation system or consist of a highly specialized predictor that is tailored to …

2018-01-12abs ↗pdf ↗

Ground-A-Video edits videos without training, preserving intended changes.

problem Complex multi-attribute video editing with omitted or wrong changes.
method Grounding-guided video-to-video translation with Cross-Frame Gated Attention.
result Zero-shot multi-attribute video editing with improved accuracy and frame consistency.

A new tree-Wasserstein distance for high-dimensional data with latent feature hierarchy.

problem Finding meaningful distances between high-dimensional data samples with latent feature hierarchy.
method Proposes a new tree-Wasserstein distance (TWD) for high-dimensional data with a latent feature hierarchy, using diffusion geometry and tree decoding.
result The proposed TWD effectively recovers the latent feature hierarchy and is efficient and scalable.

Paper fine-tunes LLMs using user edits, unifying preference, supervision, and reward feedback.

problem Adapting LLMs to user preferences and feedback types.
method Derives bounds for learning algorithms from user edits, proposes an ensembling procedure.
result Ensembling procedure outperforms individual feedback methods and robustly adapts to different user-edit distributions.

Optimal transport (\OT) theory defines a powerful set of tools to compare probability distributions. \OT~suffers however from a few drawbacks, computational and statistical, which have encouraged the proposal of several regularized variants of OT in the recent literature, one of the most notable being the \textit{slice…

2019-02-01abs ↗pdf ↗

Programming languages are emerging as a challenging and interesting domain for machine learning. A core task, which has received significant attention in recent years, is building generative models of source code. However, to our knowledge, previous generative models have always been framed in terms of generating stati…

2019-04-04abs ↗pdf ↗

Neural network for subgraph similarity computation with pruning.

problem Computing subgraph similarity between a target and query graph.
method Convert pruning to node relabeling, relax to differentiable problem, design neural network for SED computation.
result Establishes new state-of-the-art results across multiple benchmark datasets.

We propose a new generative model of sentences that first samples a prototype sentence from the training corpus and then edits it into a new sentence. Compared to traditional models that generate from scratch either left-to-right or by first sampling a latent sentence vector, our prototype-then-edit model improves perp…

2017-09-26abs ↗pdf ↗

MEGAN models chemical reactions as graph edits, improving synthesis planning.

problem Generating and predicting chemical reactions under constraints.
method End-to-end encoder-decoder neural model inspired by arrow pushing formalism.
result State-of-the-art accuracy in standard benchmarks for retrosynthesis prediction.

This study investigates self-supervised learning with Wasserstein distance on tree structures.

problem Improving self-supervised learning methods using Wasserstein distance.
method Utilized Tree-Wasserstein distance (TWD) and Jeffrey divergence regularization for training.
result A simple combination of softmax function and Tree-Wasserstein distance outperforms cosine similarity-based methods.

The paper proposes a method to infer differentiation trees from RNA velocity data.

problem Reconstructing dynamic cellular processes from sequencing data.
method Defining varifold distances between RNA velocity curves to approximate shortest-path distances in a tree.
result The varifold distance method approximates the shortest-path distance in a tree isomorphic to the target differentiation tree.

Paper proposes efficient image inversion and editing using rectified stochastic differential equations.

problem Inversion and editing of real images using generative models.
method Proposes RF inversion using dynamic optimal control and a linear quadratic regulator, extending to stochastic sampler for Flux.
result Allows state-of-the-art performance in zero-shot inversion and editing, outperforming prior works.

Method learns hierarchical representations of samples and features simultaneously.

problem Hierarchical structures in samples and features not considered by existing methods.
method Jointly learns hierarchical representations via Tree-Wasserstein Distance alternating between samples and features.
result Method improves performance in link prediction and node classification tasks.

A review of nearest neighbour classifiers, focusing on similarity measures and computational efficiency.

problem Improving the performance of nearest neighbour classifiers.
method Explains mechanisms for assessing similarity (distance), identifying nearest neighbours, and reducing data dimensionality.
result Added new sections on time-series similarity measures, retrieval speed-up, and intrinsic dimensionality.

For the task of generating complex outputs such as source code, editing existing outputs can be easier than generating complex outputs from scratch. With this motivation, we propose an approach that first retrieves a training example based on the input (e.g., natural language description) and then edits it to the desir…

2018-12-04abs ↗pdf ↗

Differentiable language model attacks improve adversarial examples for categorical sequence classifiers.

problem Challenges in adversarial attacks for categorical sequence models due to non-differentiability.
method Fine-tuning a language model as a generator of adversarial examples, using a differentiable loss function that combines a surrogate classifier score and approximate edit distance.
result Semantically better and more resistant adversarial examples.