Learning in the latent variable model is challenging in the presence of the complex data structure or the intractable latent variable. Previous variational autoencoders can be low effective due to the straightforward encoder-decoder structure. In this paper, we propose a variational composite autoencoder to sidestep th…
A standard Variational Autoencoder, with a Euclidean latent space, is structurally incapable of capturing topological properties of certain datasets. To remove topological obstructions, we introduce Diffusion Variational Autoencoders with arbitrary manifolds as a latent space. A Diffusion Variational Autoencoder uses t…
Gaussian process variational autoencoders improve disentanglement in time series data.
problem Learning disentangled representations from multivariate time series data.
method Model each latent channel with a Gaussian process prior and a structured variational distribution to capture temporal dependencies.
result Competitive performance on benchmark and real-world medical time series data.
We develop a framework for incorporating structured graphical models in the \emph{encoders} of variational autoencoders (VAEs) that allows us to induce interpretable representations through approximate variational inference. This allows us to both perform reasoning (e.g. classification) under the structural constraints…
tvGP-VAE models tensor-valued latent variables with Gaussian processes for better data structure representation.
problem Agnostic latent variables in VAEs ignore data structure correlations.
method Proposes tensor-variate Gaussian process prior for variational autoencoder.
result Explicitly modeling correlation structures improves model performance in reconstruction.
Improved SVAE models enhance sequential data prediction.
problem Challenges in implementing and using structured variational autoencoders.
method Modern machine learning tools, hardware acceleration, parallelization, automatic differentiation, exploiting structure in the prior.
result SVAEs outperform general alternatives in accuracy and efficiency.
VDA improves disentanglement of latent representations in complex signals.
problem Learning disentangled and interpretable representations in nonstationary, high-dimensional time-evolving signals.
method Variational decomposition autoencoding (VDA) framework, incorporating signal decomposition, contrastive self-supervised task, and variational prior approximation.
result DecVAEs surpass state-of-the-art VAE-based methods in disentanglement quality and generalization.
VAELLS learns latent manifold structure to improve VAE model accuracy.
problem VAEs struggle with mismatched latent structure and global structure.
method Integrates learnable manifold model into latent space of VAE.
result Improves model accuracy by matching prior to data manifold structure.
Proposes a multi-view VAE for imputing missing data from correlated sources.
problem Imputing missing data from multi-view sources with latent space correlation.
method Enforces a joint prior with latent space correlation between VAEs trained on each view.
result More strongly correlated latent spaces are uncovered, enabling effective imputation.
Paper proposes efficient multivariate spatial Fay-Herriot models using variational autoencoders.
problem Estimating population characteristics in small areas with limited data.
method Integrates multivariate spatial Fay-Herriot model with variational autoencoders to leverage spatial structure efficiently.
result Significant computational efficiency improvements for high-dimensional datasets.
Proposes a variational autoencoder for long-term customer revenue forecasting.
problem Predicting long-term customer revenue from sparse and irregular transaction data.
method Variational Autoencoder (VAE) with flexible latent representation.
result Improves upon latest benchmarks in multiple real-world datasets.
New method learns disentangled discrete representations using categorical variational autoencoders.
problem Learning disentangled representations from discrete latent spaces.
method Replaced standard Gaussian VAE with a categorical VAE to mitigate rotational invariance.
result Categorical distributions improve learning of disentangled representations.
Proposes a multi-objective variational autoencoder for smart infrastructure damage detection.
problem Detecting and diagnosing damage in smart infrastructure using multi-way data.
method Multi-objective variational autoencoder (MVA) method for smart infrastructure damage detection and diagnosis.
result The method accurately detects structural damage, estimates severity, and captures damage locations.
Bayesian model updating uses VAEs to approximate likelihood with small data.
problem Approximating likelihood for small data sets in structural analysis.
method Uses multimodal VAEs to approximate likelihood, suitable for high-dimensional correlated observations.
result Demonstrates computational efficiency and accuracy compared to original VAE approach.
DefenseVGAE defends graph neural networks against adversarial attacks.
problem Vulnerability of GNNs to adversarial structural perturbations.
method Variational Graph Autoencoder (VGAE) to reconstruct graph structure.
result DefenseVGAE reduces adversarial perturbations and boosts GCN performance.
A scalable factorized Gaussian process VAE for faster inference.
problem Inference bottlenecks in Gaussian process VAEs.
method Factorizes latent kernel across auxiliary features, leveraging independence.
result Significant speed-up in inference time (in theory and practice).
Proposes variational autoencoder for efficient MMSE estimation.
problem Efficient parameterized MMSE estimation for noisy observations.
method Variational autoencoder models data distribution, approximates MMSE.
result Proposed estimator performs well compared to state-of-the-art.
A deep learning model organizes RNA graphs to reveal folding patterns and properties.
problem Organizing and understanding the complex folding patterns of RNA secondary structures.
method Geometric scattering autoencoder (GSAE) network for learning graph embeddings.
result GSAE accurately reflects bistable RNA structures and can sample new folding trajectories.
Geometric interpretation improves VAE performance and robustness.
problem Improving Variational Autoencoder performance and robustness.
method Introducing a geometric perspective on VAEs, sampling from the Riemannian latent space.
result Improved generation and interpolations with competitive or better performance on benchmark datasets.
A new method uses hyperspherical latent spaces to disentangle data with periodic structures.
problem Disentangling data with periodic or cyclic underlying factors in Euclidean space.
method Diffusion Variational Autoencoder with a modified Evidence Lower Bound.
result The method can recover periodic true factors effectively.
Paper proposes a new Autoencoder for robustly encoding white matter streamlines.
problem Limited Autoencoder architectures ignore global streamline geometry and lack interpretability.
method Introduces Differentiable Vector Quantized Variational Autoencoder (D-VQ-VAE) for entire streamline bundles.
result Demonstrates superior performance in encoding and synthesis compared to state-of-the-art Autoencoders.
Bidirectional VAE reduces parameters and improves image tasks.
problem Improving image reconstruction, classification, interpolation, and generation.
method Uses a single neural network for both encoding and decoding in both forward and backward directions.
result Bidirectional VAEs reduce parameters by almost 50% and slightly outperform unidirectional VAEs.
Variational autoencoders provide a principled framework for learning deep latent-variable models and corresponding inference models. In this work, we provide an introduction to variational autoencoders and some important extensions.
EVGAE improves VGAE's latent representation learning by mitigating over-pruning.
problem Over-pruning in VGAE limits latent variable capacity and diversity.
method EVGAE uses epitomic approach with multiple sparse VGAE models (epitomes) to increase active latent units and improve generative ability.
result EVGAE outperforms VGAE in generative ability and link prediction on citation networks.
A new method learns complex dynamical systems from data efficiently.
problem Learning complex dynamical systems from large-scale data efficiently.
method Low-rank structured variational autoencoding framework for nonlinear Gaussian state-space models.
result Consistently demonstrates better predictive capabilities compared to other models.
InVA models image outcomes from multiple modalities, outperforming standard VAEs.
problem Understanding relationships across multiple imaging modalities in neuroimaging.
method Integrative Variational Autoencoder (InVA) framework for image-on-image regression.
result InVA accurately predicts PET scans from structural MRI, outperforming conventional models.
Regularization preserves topological data structure in autoencoders.
problem Ensuring topological data structure preservation in autoencoders.
method Regularization using Legendre nodes to preserve manifold embedding.
result Regularized autoencoders ensure one-to-one embedding of data manifolds.
Autoencoders and their variations provide unsupervised models for learning low-dimensional representations for downstream tasks. Without proper regularization, autoencoder models are susceptible to the overfitting problem and the so-called posterior collapse phenomenon. In this paper, we introduce a quantization-based …
SAMI learns disentangled representations from data.
problem Learning disentangled representations from data.
method Combines diffusion models and VAEs to learn disentangled representations.
result SAMI learns disentangled representations that are interpretable and useful.
VACA models graph data for causal inference without hidden confounders.
problem Causal inference in observational data with hidden confounders.
method Variational graph autoencoders for structural causal models.
result Accurately approximates interventional and counterfactual distributions.
DICCA maps multi-view data into a shared latent space with interpretable components.
problem Learning from multiple related but distinct data views.
method DICCA extends CCA to deep generative networks and uses sparsity-inducing priors for interpretability.
result DICCA effectively disentangles shared and view-specific variations in multi-view data.
Automatic Chemical Design is a framework for generating novel molecules with optimized properties. The original scheme, featuring Bayesian optimization over the latent space of a variational autoencoder, suffers from the pathology that it tends to produce invalid molecular structures. First, we demonstrate empirically …
Variational autoencoders are powerful algorithms for identifying dominant latent structure in a single dataset. In many applications, however, we are interested in modeling latent structure and variation that are enriched in a target dataset compared to some background---e.g. enriched in patients compared to the genera…
The paper proposes a method to learn structured representations from unlabeled data using mutual information maximization.
problem Learning structured representations from unlabeled data.
method Adversarial maximization of mutual information between a structured latent variable and a target variable.
result The proposed method outperforms current baselines in document hashing and yields highly compressed interpretable representations.
Neural Decomposition breaks down VAE latent structure for better interpretability.
problem Limited interpretability of VAE latent representations.
method Adapted functional ANOVA to VAEs, applying constraints for identifiability.
result Decomposes data variation into latent and fixed input effects.
This paper explores using SSIM for better image generation in generative models.
problem Improving perceptual quality in generated images using ℓ2 norm. method Theoretical discussion and practical implementation of SSIM in generative models and autoencoders.
result SSIM can be used in generative models and autoencoders to generate better images.
A new model designs molecular latent vectors for drug discovery.
problem Designing effective molecular descriptors from molecular structures.
method Proposes a denoising diffusion probabilistic model (DDPM) for variational autoencoding molecular graphs.
result Demonstrates superior prediction performance and robustness compared to existing approaches.
Learning network representations is a fundamental task for many graph applications such as link prediction, node classification, graph clustering, and graph visualization. Many real-world networks are interpreted as dynamic networks and evolve over time. Most existing graph embedding algorithms were developed for stati…
VAEs (Variational AutoEncoders) have proved to be powerful in the context of density modeling and have been used in a variety of contexts for creative purposes. In many settings, the data we model possesses continuous attributes that we would like to take into account at generation time. We propose in this paper GLSR-V…
We extend Stochastic Gradient Variational Bayes to perform posterior inference for the weights of Stick-Breaking processes. This development allows us to define a Stick-Breaking Variational Autoencoder (SB-VAE), a Bayesian nonparametric version of the variational autoencoder that has a latent representation with stocha…
X-VAE uses data-adaptive Gaussian priors to improve latent space modeling.
problem Limitations of standard Gaussian priors in complex datasets.
method Data-adaptive Gaussian prior derived from pretrained autoencoder latent codes.
result Improved latent space modeling and generation quality.
ISVAE enhances interpretability in time series clustering using a novel filter bank.
problem Improving interpretability in time series clustering models.
method Integrates a Filter Bank (FB) into a Variational Autoencoder (VAE) to enhance interpretability and clusterability.
result ISVAE produces a more interpretable and separable encoding with enhanced clusterability.
The recently developed variational autoencoders (VAEs) have proved to be an effective confluence of the rich representational power of neural networks with Bayesian methods. However, most work on VAEs use a rather simple prior over the latent variables such as standard normal distribution, thereby restricting its appli…
Poisson variational autoencoders introduce a metabolic cost term that penalizes high baseline activity.
problem Energy constraints in computation.
method Poisson variational autoencoders with a Kullback-Leibler divergence term proportional to firing rates.
result Poisson variational autoencoders introduce a metabolic cost term that penalizes high baseline activity.
Variational autoencoders often collapse, showing latent variables are non-identifiable.
problem Posterior collapse in variational autoencoders due to non-identifiable latent variables.
method Proves latent variable non-identifiability causes posterior collapse. Proposes latent-identifiable models using Brenier maps and input convex neural networks.
result Latent-identifiable models resolve posterior collapse and provide meaningful representations.
DisCoPyro combines category theory with machine learning for program learning.
problem Applying category theory to machine learning tasks.
method Introducing DisCoPyro, a framework combining categorical structures with amortized variational inference.
result DisCoPyro can be applied in program learning for variational autoencoders and potentially contributes to AGI.
A new algorithmic framework is proposed for learning autoencoders of data distributions. We minimize the discrepancy between the model and target distributions, with a \emph{relational regularization} on the learnable latent prior. This regularization penalizes the fused Gromov-Wasserstein (FGW) distance between the la…
DAEs can generate images without additional loss terms, inheriting VAE properties.
problem Difficulty in using VAEs for practical generative modelling.
method Empirical exploration of DAEs for image generation without novel methods.
result DAEs can generate images successfully without additional loss terms.