Physics-informed methods infer spatial dynamics from static snapshots, but limits exist.
problem Inferring spatial dynamics from static molecular patterns.
method Combining flexible representations with mechanistic constraints, analyzing structural identifiability, and adapting physics-informed schemes.
result Static spatial patterns can identify spatially varying dynamics, but limits exist due to modeling choices.
We describe tests validating progress made toward acceleration and automation of hydrodynamic codes in the regime of developed turbulence by three Deep Learning (DL) Neural Network (NN) schemes trained on Direct Numerical Simulations of turbulence. Even the bare DL solutions, which do not take into account any physics …
TNDE quantifies dynamic gene drivers from single-cell snapshots.
problem Reconstructing time-resolved regulatory effects in biological processes.
method Time-varying Network Driver Estimation (TNDE) using shared graph attention encoder and partial optimal transport.
result TNDE identifies stage-specific driver genes in mouse erythropoiesis.
Learning network representations is a fundamental task for many graph applications such as link prediction, node classification, graph clustering, and graph visualization. Many real-world networks are interpreted as dynamic networks and evolve over time. Most existing graph embedding algorithms were developed for stati…
Networks evolve continuously over time with the addition, deletion, and changing of links and nodes. Such temporal networks (or edge streams) consist of a sequence of timestamped edges and are seemingly ubiquitous. Despite the importance of accurately modeling the temporal information, most embedding methods ignore it …
In this work, we consider the problem of combining link, content and temporal analysis for community detection and prediction in evolving networks. Such temporal and content-rich networks occur in many real-life settings, such as bibliographic networks and question answering forums. Most of the work in the literature (…
Due to the dynamic nature of biological systems, biological networks underlying temporal process such as the development of {\it Drosophila melanogaster} can exhibit significant topological changes to facilitate dynamic regulatory functions. Thus it is essential to develop methodologies that capture the temporal evolut…
CT-OT Flow estimates continuous-time dynamics from discrete snapshots.
problem Estimating continuous-time dynamics from temporally aggregated snapshots with noisy or uncertain timestamps.
method Two-stage framework: aligning neighboring intervals via partial optimal transport (POT) and reconstructing a continuous-time distribution through temporal kernel smoothing.
result Reduces distributional and trajectory errors compared with existing methods across synthetic and real datasets.
An important part of many machine learning workflows on graphs is vertex representation learning, i.e., learning a low-dimensional vector representation for each vertex in the graph. Recently, several powerful techniques for unsupervised representation learning have been demonstrated to give the state-of-the-art perfor…
A new method predicts higher-order interactions in evolving graphs using simplicial complexes.
problem Predicting higher-order interactions in dynamic graphs with theoretical guarantees.
method Capturing higher-order interactions as simplices, modeling neighborhoods with face-vectors, and developing a nonparametric kernel estimator.
result Our method outperforms existing higher-order prediction methods and is theoretically consistent.
DDD reformulated for sparse matrices, integrating trajectory and snapshot time series data.
problem Efficiently integrate trajectory and snapshot time series data.
method Reformulate DDD to use compact basis functions, reducing parameter scaling.
result Inference of sparse matrices reduces the number of parameters in DDD.
A neural network improves DOA estimation from a single snapshot.
problem Estimating DOAs from a single snapshot with limited aperture.
method Deep learning architecture trained to generate high-resolution spatial spectrum.
result Our (SP)2-Net outperforms classical methods. Unified framework for discrete diffusion modeling with flexible noising processes.
problem Efficient modeling of large discrete state spaces with arbitrary corruption dynamics.
method Generalized Discrete Diffusion from Snapshots (GDDS) framework that supports uniformization for fast noising and snapshot-based ELBO for reverse process.
result GDDS outperforms existing discrete diffusion methods in training efficiency and generation quality.
Direction of arrival (DOA) estimation is a classical problem in signal processing with many practical applications. Its research has recently been advanced owing to the development of methods based on sparse signal reconstruction. While these methods have shown advantages over conventional ones, there are still difficu…
A neural network, IHT-Net, improves DOA estimation with sparse arrays.
problem Single-snapshot DOA estimation with sparse arrays in dynamic settings.
method IHT-inspired neural network with recurrent neural network and autoencoders.
result IHT-Net achieves faster convergence and higher accuracy in DOA estimation.
Bayesian method predicts future network configurations from past snapshots.
problem Reconstructing evolving networks from partial observations.
method Bayesian approach using past network snapshots to inform future predictions.
result Method accurately predicts link probabilities and network structure.
Recently a variety of LSTM-based conditional language models (LM) have been applied across a range of language generation tasks. In this work we study various model architectures and different ways to represent and aggregate the source information in an end-to-end neural dialogue system framework. A method called snaps…
We study the inference of a model of dynamic networks in which both communities and links keep memory of previous network states. By considering maximum likelihood inference from single snapshot observations of the network, we show that link persistence makes the inference of communities harder, decreasing the detectab…
TURB-Rot provides a large database of turbulent rotating flow snapshots for research.
problem Lack of large-scale, high-resolution datasets for turbulent rotating flows.
method Direct Numerical Simulations of Navier-Stokes equations with rotation.
result Provides a diverse set of 300K complex images and fields for testing.
Study characterizes spike deconvolution basin for noisy data.
problem Recover spike locations from noisy convolution with PSF across multiple snapshots.
method Variable-projection formulation, explicit basin of convexity characterization, local convergence guarantees.
result Consistent estimator within basin of convexity under stochastic noise, complementary error bound under adversarial noise.
Programming languages are emerging as a challenging and interesting domain for machine learning. A core task, which has received significant attention in recent years, is building generative models of source code. However, to our knowledge, previous generative models have always been framed in terms of generating stati…
Paper improves DOA estimation in sparse arrays using Siamese neural networks.
problem Challenges in DOA estimation with limited snapshots in sparse linear arrays.
method Introduces a Siamese neural network with a sparse augmentation layer for enhanced signal feature embedding.
result Demonstrates improved DOA estimation accuracy in sparse arrays.
New attacks improve privacy audits by analyzing model updates.
problem Improving privacy audits of AI models through sequence analysis.
method Developed SeMI attacks to identify target insertions in model sequences.
result SeMI attacks achieve higher power and tighter privacy audits.
GER learns particle dynamics from unpaired snapshots using physics-informed GANs.
problem Learning particle dynamics from unpaired snapshots with physics constraints.
method Physics-informed generative model to fit particle ensemble distributions.
result Inferred dynamics of particle ensembles governed by SODEs up to 100 dimensions.
A new GCN model detects cryptocurrency fraud by considering network evolution and balance theory.
problem Detecting fraud in evolving signed cryptocurrency trust networks.
method Motif-aware temporal GCN using balance theory and learnable weights.
result The model outperforms existing methods on bitcoin datasets.
DiffVolume generates realistic volume snapshots for LOBs.
problem Generating high-dimensional volume snapshots in LOBs is challenging.
method Conditional Diffusion model for volume generation.
result DiffVolume outperforms in realism, counterfactual generation, and downstream prediction.
Complex high dimensional stochastic dynamic systems arise in many applications in the natural sciences and especially biology. However, while these systems are difficult to describe analytically, "snapshot" measurements that sample the output of the system are often available. In order to model the dynamics of such sys…
New method infers population dynamics from snapshots using path space optimization.
problem Recover dynamics of a population from its temporal marginals.
method Grid-free algorithm using Schrödinger bridges coupled via noisy gradient descent in mean-field limit.
result Global convergence to min-entropy estimator with end-to-end theoretical guarantees.
Temporal networks are ubiquitous and evolve over time by the addition, deletion, and changing of links, nodes, and attributes. Although many relational datasets contain temporal information, the majority of existing techniques in relational learning focus on static snapshots and ignore the temporal dynamics. We propose…
New method interprets quantum many-body snapshots for phase detection.
problem Classifying phases of matter from quantum simulations.
method Confusion learning with correlation convolutional neural networks.
result Network detects changes in thermodynamic properties of quantum systems.
SnapMMD forecasts cell differentiation outcomes from snapshot data.
problem Forecasting cell differentiation outcomes from limited snapshot data.
method SnapMMD learns dynamics by directly fitting the joint distribution of state measurements and observation time with MMD loss, allowing for unknown and state-dependent volatilities.
result SnapMMD delivers accurate forecasts and an R2-style statistic for diagnosing fit.
Method learns SDEs from data snapshots.
problem Learning drift and diffusion of SDEs from data.
method Two-step process: learn drift by expected value, learn diffusion by SDP.
result Validated on examples and simulations.
In a dynamic network, the neighborhood of the vertices evolve across different temporal snapshots of the network. Accurate modeling of this temporal evolution can help solve complex tasks involving real-life social and interaction networks. However, existing models for learning latent representation are inadequate for …
New method learns cell trajectories from multiple snapshots.
problem Inferring cell trajectories from limited, single-time-point data.
method Multi-marginal Schrödinger Bridges with iterative reference refinement.
result Effective in capturing long-term dependencies and learning from multiple time points.
3MSBM learns smooth trajectories from multiple snapshots.
problem Capturing long-range temporal dependencies in complex systems.
method Lifts dynamics to phase space, generalizes stochastic bridges to multi-marginal conditional problems, learns transport maps preserving intermediate marginals.
result Significantly improves convergence and scalability in capturing complex dynamics.
Scalable method for regionalizing and extracting temporal patterns from time series data.
problem Static spatial snapshots and ad hoc regularization limit effective spatial analysis and resource management.
method Minimum description length principle for fully nonparametric spatial partitioning and time series archetypes.
result Accurately recovers planted regional structure and drivers in synthetic and empirical data.
Framework learns dynamic graph attributes and links co-evolution.
problem Forecasting change of node attributes and link formation in dynamic graphs.
method CoEvoGNN framework with temporal self-attention and joint optimization.
result Framework outperforms baselines on predicting unseen graph snapshots.
New method learns population dynamics from snapshots using JKO scheme and inverse optimization.
problem Recovering underlying process governing particle evolution from discrete time samples.
method Combines JKO scheme with inverse optimization techniques for end-to-end adversarial training.
result Improved performance over prior JKO-based methods with theoretical guarantees.
Deep learning architectures have proved versatile in a number of drug discovery applications, including the modelling of in vitro compound activity. While controlling for prediction confidence is essential to increase the trust, interpretability and usefulness of virtual screening models in drug discovery, techniques t…
Numerous networks in the real world change over time, in the sense that nodes and edges enter and leave the networks. Various dynamic random graph models have been proposed to explain the macroscopic properties of these systems and to provide a foundation for statistical inferences and predictions. It is of interest to…
In economic and financial networks, the strength of each node has always an important economic meaning, such as the size of supply and demand, import and export, or financial exposure. Constructing null models of networks matching the observed strengths of all nodes is crucial in order to either detect interesting devi…
User intended actions are widely seen in many areas. Forecasting these actions and taking proactive measures to optimize business outcome is a crucial step towards sustaining the steady business growth. In this work, we focus on pre- dicting attrition, which is one of typical user intended actions. Conventional attriti…
Method learns software resource usage from snapshots.
problem Challenges in learning time-varying, correlated resource usage.
method Graph structured Schrödinger bridge problem for nonparametric learning.
result Predicts most-likely resource distributions.
Study classifies static potentials on 3-manifolds, proving one-dimensionality under specific conditions.
problem Classifying the dimension of static potentials on 3-manifolds.
method Analysis of relative zero sets of static potentials, using Miao and Tam's technique.
result Proves one-dimensionality of static potentials under specific conditions.
New static vacuum metrics confirmed for near Euclidean boundary data.
problem Establishing sufficient conditions for near Euclidean boundary data in static vacuum metrics.
method Using new arguments from studying the conjecture for arbitrary static vacuum metrics.
result Any hypersurface in a dense subfamily is static regular.
Diffusion models simulate molecular dynamics with adjustable accuracy.
problem Simulating molecular dynamics with high accuracy and efficiency.
method Diffusion models as Euler-Maruyama integrators for Langevin dynamics, learning forces from static snapshots.
result Diffusion models generate molecular trajectories with temporal correlations similar to MD simulations.
New method improves ensemble quality by exploring the pre-train basin more effectively.
problem Limited diversity in ensembles trained from a single pre-trained checkpoint.
method Proposed StarSSE modification of Snapshot Ensembles for transfer learning.
result Stronger ensembles and uniform model soups achieved.
Extends static vacuum metrics with specific boundary conditions.
problem Proving the existence of static vacuum metrics with prescribed boundary data.
method Introducing static regular types (I) and (II), showing local well-posedness, and confirming Bartnik's conjecture.
result Confirms Bartnik's static vacuum extension conjecture for a broad range of boundary conditions.