A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
Lung segmentation accuracy varies little across diverse datasets.
Dynamic memory prevents forgetting in continuous learning of medical images.
Efficient and precise classification of histological cell nuclei is of utmost importance due to its potential applications in the field of medical image analysis. It would facilitate the medical practitioners to better understand and explore various factors for cancer treatment. The classification of histological cell …
A new model answers questions about medical images.
Deep learning improves MRI analysis of MSK disorders.
Due to the rapid innovation of technology and the desire to find and employ biomarkers for neurodegenerative disease, high-dimensional data classification problems are routinely encountered in neuroimaging studies. To avoid over-fitting and to explore relationships between disease and potential biomarkers, feature lear…
Traditionally, the automatic recognition of human activities is performed with supervised learning algorithms on limited sets of specific activities. This work proposes to recognize recurrent activity patterns, called routines, instead of precisely defined activities. The modeling of routines is defined as a metric lea…
Machine learning model diagnoses COVID-19 from routine blood tests.
In coronary CT angiography, a series of CT images are taken at different levels of radiation dose during the examination. Although this reduces the total radiation dose, the image quality during the low-dose phases is significantly degraded. To address this problem, here we propose a novel semi-supervised learning tech…
BLISS detects and separates astronomical sources quickly and accurately.
We extend first-order model agnostic meta-learning algorithms (including FOMAML and Reptile) to image segmentation, present a novel neural network architecture built for fast learning which we call EfficientLab, and leverage a formal definition of the test error of meta-learning algorithms to decrease error on out of d…
Infrastructure monitors AI/ML radiology models across multiple sites.
This paper addresses privacy in federated learning for medical imaging by estimating model uncertainty.
The MIMIC-CXR dataset is (to date) the largest released chest x-ray dataset consisting of 473,064 chest x-rays and 206,574 radiology reports collected from 63,478 patients. We present the results of training and evaluating a collection of deep convolutional neural networks on this dataset to recognize multiple common t…
Aim: To review how machine learning (ML) is applied to imaging biomarkers in neuro-oncology, in particular for diagnosis, prognosis, and treatment response monitoring. Materials and Methods: The PubMed and MEDLINE databases were searched for articles published before September 2018 using relevant search terms. The sear…
Cryo-electron microscopy (cryo-EM) studies using single particle reconstruction are extensively used to reveal structural information on macromolecular complexes. Aiming at the highest achievable resolution, state of the art electron microscopes automatically acquire thousands of high-quality micrographs. Particles are…
Calcium imaging has revolutionized systems neuroscience, providing the ability to image large neural populations with single-cell resolution. The resulting datasets are quite large, which has presented a barrier to routine open sharing of this data, slowing progress in reproducible research. State of the art methods fo…
PSO optimizes model parameters in nonstandard distributions.
Ultrasound diagnosis is routinely used in obstetrics and gynecology for fetal biometry, and owing to its time-consuming process, there has been a great demand for automatic estimation. However, the automated analysis of ultrasound images is complicated because they are patient-specific, operator-dependent, and machine-…
The computation of convolution layers in deep neural networks typically rely on high performance routines that trade space for time by using additional memory (either for packing purposes or required as part of the algorithm) to improve performance. The problems with such an approach are two-fold. First, these routines…
We propose a parallelizable sparse inverse formulation Gaussian process (SpInGP) for temporal models. It uses a sparse precision GP formulation and sparse matrix routines to speed up the computations. Due to the state-space formulation used in the algorithm, the time complexity of the basic SpInGP is linear, and becaus…
In this demo paper, we introduce the DARPA D3M program for automatic machine learning (ML) and JPL's MARVIN tool that provides an environment to locate, annotate, and execute machine learning primitives for use in ML pipelines. MARVIN is a web-based application and associated back-end interface written in Python that e…
Research proposes a risk-free machine learning model for COVID screening from routine blood tests.
We introduce SPFlow, an open-source Python library providing a simple interface to inference, learning and manipulation routines for deep and tractable probabilistic models called Sum-Product Networks (SPNs). The library allows one to quickly create SPNs both from data and through a domain specific language (DSL). It e…
Celeste is a procedure for inferring astronomical catalogs that attains state-of-the-art scientific results. To date, Celeste has been scaled to at most hundreds of megabytes of astronomical images: Bayesian posterior inference is notoriously demanding computationally. In this paper, we report on a scalable, parallel v…
ParaMonte::Python streamlines Bayesian data analysis with fast Monte Carlo and MCMC routines.
This paper analyzes how errors accumulate in PCA's deflation method.
We discuss a general notion of "sparsity structure" and associated recoveries of a sparse signal from its linear image of reduced dimension possibly corrupted with noise. Our approach allows for unified treatment of (a) the "usual sparsity" and "usual recovery," (b) block-sparsity with possibly overlapping blo…
Uncertainty of labels in clinical data resulting from intra-observer variability can have direct impact on the reliability of assessments made by deep neural networks. In this paper, we propose a method for modelling such uncertainty in the context of 2D echocardiography (echo), which is a routine procedure for detecti…
VSD efficiently learns conditional distributions for combinatorial designs.
Efficiently matches subgraphs in noisy data without node labels.
This paper investigates the problem of determining a binary-valued function through a sequence of strategically selected queries. The focus is an algorithm called Generalized Binary Search (GBS). GBS is a well-known greedy algorithm for determining a binary-valued function through a sequence of strategically selected q…
Computer-aided diagnosis systems for classification of different type of skin lesions have been an active field of research in recent decades. It has been shown that introducing lesions and their attributes masks into lesion classification pipeline can greatly improve the performance. In this paper, we propose a framew…
The graph Laplacian is a standard tool in data science, machine learning, and image processing. The corresponding matrix inherits the complex structure of the underlying network and is in certain applications densely populated. This makes computations, in particular matrix-vector products, with the graph Laplacian a ha…
Proposes a cGAN-based model for probabilistic predictions and uncertainty estimation.
A new cycleGAN architecture reduces memory and parameter requirements for low-dose CT denoising.
Domain adaptation (DA) addresses the real-world image classification problem of discrepancy between training (source) and testing (target) data distributions. We propose an unsupervised DA method that considers the presence of only unlabelled data in the target domain. Our approach centers on finding matches between sa…
Detects jumps in financial asset prices with U-shape volatility.
Testing the implementation of deep learning systems and their training routines is crucial to maintain a reliable code base. Modern software development employs processes, such as Continuous Integration, in which changes to the software are frequently integrated and tested. However, testing the training routines requir…
While the channel capacity reflects a theoretical upper bound on the achievable information transmission rate in the limit of infinitely many bits, it does not characterise the information transfer of a given encoding routine with finitely many bits. In this note, we characterise the quality of a code (i. e. a given en…
Meta-learning improves feature extraction for few-shot tasks.
This paper improves Koopman operator approximations by pruning subspaces in RKHS.
We consider the problem of estimating a regression function in the common situation where the number of features is small, where interpretability of the model is a high priority, and where simple linear or additive models fail to provide adequate performance. To address this problem, we present GapTV, an approach that …
Machine learning detects and characterizes whistler radio waves for real-time monitoring of the plasmasphere.
Machine learning models detect COVID-19 from routine blood tests.
EiNets improve PCs for scalable probabilistic modeling.
We consider the problem of estimating a regression function in the common situation where the number of features is small, where interpretability of the model is a high priority, and where simple linear or additive models fail to provide adequate performance. To address this problem, we present Maximum Variance Total V…
Medical ultrasound technology is widely used in routine clinical applications such as disease diagnosis and treatment as well as other applications like real-time monitoring of human tongue shapes and motions as visual feedback in second language training. Due to the low-contrast characteristic and noisy nature of ultr…