GAN normalizes CT scans for consistent radiomic feature values.
problem Variations in dose levels and slice thickness affect radiomic features sensitivity.
method Used a 3D generative adversarial network (GAN) to normalize reduced dose, thick slice images to normal dose, thinner slice images.
result GAN-based approach led to significantly smaller error in radiomic features.
Use expert visualization or conventional clinical indices can lack accuracy for borderline classications. Advanced statistical approaches based on eigen-decomposition have been mostly concerned with shape and motion indices. In this paper, we present a new approach to identify CVDs from cine-MRI by estimating large poo…
Novel fusion network combines polarization and radiomics features for liver cancer classification.
problem Challenges in histopathological diagnosis of HCC and ICC.
method Two-tier fusion approach: feature-level and classification-level.
result Significantly enhances classification accuracy, even at reduced resolutions.
Radiomics aims to extract and analyze large numbers of quantitative features from medical images and is highly promising in staging, diagnosing, and predicting outcomes of cancer treatments. Nevertheless, several challenges need to be addressed to construct an optimal radiomics predictive model. First, the predictive p…
The study explores statistical methods to interpret radiological models and identify key features.
problem Interpreting complex radiological models for clinical use.
method Exploration of statistical techniques to assess relationships between radiomic features.
result Identification of key relationships and features for improved interpretability.
Proposes ConRad model for lung cancer classification using radiomics and interpretable machine learning.
problem Lack of interpretability in deep neural networks for cancer diagnosis.
method Integration of radiomics and DNN-predicted biomarkers in interpretable classifiers (ConRad).
result ConRad models outperform CNNs in five-fold cross-validation.
Novel method reduces radiomic data annotation needs.
problem Insufficient labeled radiomic data for disease diagnosis.
method Collaborative self-supervised learning with two pretext tasks.
result Outperforms other self-supervised methods on radiomic data.
Glioma grading before surgery is very critical for the prognosis prediction and treatment plan making. We present a novel wavelet scattering-based radiomic method to predict noninvasively and accurately the glioma grades. The method consists of wavelet scattering feature extraction, dimensionality reduction, and glioma…
Deep learning and radiomics methods assess coronary artery plaque from CT scans.
problem Improving patient management and clinical outcomes by assessing coronary artery plaque.
method Three machine learning approaches: radiomics, deep learning, and fusion of both.
result Methods achieve AUC scores of 0.84-0.88, comparable to FFR measurements.
Radiomics identifies subtle cardiac changes in hypertension.
problem Subtle cardiac alterations in hypertension not captured by conventional imaging.
method Combines feature selection and machine learning for identifying structural and tissue changes.
result Radiomics model detects changes beyond conventional imaging.
Motivation: Radiomics refers to the high-throughput mining of quantitative features from radiographic images. It is a promising field in that it may provide a non-invasive solution for screening and classification. Standard machine learning classification and feature selection techniques, however, tend to display infer…
Study uses multi-task Bayesian optimization to speed up SVM hyperparameter tuning for nodules diagnosis.
problem Redundant and time-consuming hyperparameter tuning for SVM classifiers in medical imaging.
method Employed multi-task Bayesian optimization to accelerate hyperparameter search.
result Multi-task Bayesian optimization significantly accelerates hyperparameter search.
A new metric FRD improves comparing medical images.
problem Comparing medical images for distribution or domain differences.
method Developed a new metric FRD using standardized radiomic features.
result FRD outperforms other metrics in various medical imaging applications.
Background and Purpose: Biopsy is the main determinants of glioma clinical management, but require invasive sampling that fail to detect relevant features because of tumor heterogeneity. The purpose of this study was to evaluate the accuracy of a voxel-wise, multiparametric MRI radiomic method to predict features and d…
Model estimates lung well-aerated volume from CT images, independent of patient and imaging parameters.
problem Lack of clear connection between quantitative metrics in lung CT images and physiology.
method Patient-independent model using Gaussian fit to lower CT histogram data points.
result Model estimates well-aerated volume (WAVE) independent of CT reconstruction parameters and respiratory cycle.
3D U-Net improves kidney and tumor segmentation from CT scans.
problem Manual segmentation by clinicians is laborious and error-prone.
method Multi-scale supervised 3D U-Net with deep supervision and post-processing.
result MSS U-Net achieves high Dice coefficients (0.969 for kidney, 0.805 for tumor) on KiTS19 dataset.
The paper demonstrates the use of the fully convolutional neural network for glioma segmentation on the BraTS 2019 dataset. Three-layers deep encoder-decoder architecture is used along with dense connection at encoder part to propagate the information from coarse layer to deep layers. This architecture is used to train…
A new method for combining multiple data views in supervised learning.
problem Combining multiple data views in supervised learning, especially in biology and medicine.
method Cooperative learning combines squared error loss with an agreement penalty to encourage predictions from different data views to agree.
result Cooperative learning achieves higher predictive accuracy on simulated and real multiomics data.
Mammographic breast density, a parameter used to describe the proportion of breast tissue fibrosis, is widely adopted as an evaluation characteristic of the likelihood of breast cancer incidence. In this study, we present a radiomics approach based on residual learning for the classification of mammographic breast dens…
Method cleans noisy training labels for biomedical data.
problem Accurately labeling biomedical data is challenging.
method Reliability-based training data cleaning with inductive conformal prediction.
result Significant enhancements in classification performance across multiple tasks.
Identifies features most relevant to concept drift in data.
problem Identifying features most relevant to concept drift.
method Distinguishing between drift inducing and faithfully drifting features; deriving minimal subsets of features to characterize drift.
result Derives a detection algorithm for concept drift.
Paper predicts EEG features from acoustic features using RNN and GAN.
problem Predicting EEG features from acoustic features.
method Recurrent Neural Network (RNN) and Generative Adversarial Network (GAN).
result Lower RMSE and normalized RMSE values compared to generating acoustic features from EEG features.
Introduces RFI for assessing feature importance relative to any subset of features.
problem Lack of nuanced feature importance computation.
method Generalizes PFI and CFI to assess relative feature importance.
result Derives general interpretation rules for RFI.
A single pre-trained agent guides feature selection using knockoffs.
problem Feature selection challenges in AI-readiness of data.
method Generates knockoff features and uses reinforcement learning.
result Optimal feature subset identified with reduced dependency on target variable.
Feature networks link ML features via graph structure for enhanced learning.
problem Enhancing feature expressiveness and learning efficiency in machine learning.
method Graph representation of feature vectors, leveraging Fourier and functional analysis.
result Feature networks enable novel, complex feature dependencies.
Approach for selecting features by discarding nuisance and correlated ones.
problem Large datasets with correlated and nuisance features.
method Laplacian score criterion, autoencoder architecture, concrete layer.
result Outperforms similar approaches in clustering performance.
New stability measures for similar features improve feature selection accuracy.
problem Existing stability measures fail to distinguish similar features in highly correlated datasets.
method Introduce new adjusted stability measures that consider feature similarities.
result One new stability measure considers highly similar features as interchangeable.
Counterexamples show HSIC feature selection misses critical features.
problem Feature selection using HSIC misses important features.
method Feature selection via HSIC maximization.
result HSIC feature selection can miss critical features.
This paper shows feature importance remains valid even in low-performing models.
problem Feature importance validity in low-performing machine learning models for biomedical data.
method Experiments with synthetic and real biomedical datasets to compare feature rank stability under different data reductions.
result Feature importance can be maintained even at low performance levels if data size is adequate.
New algorithms select and rank features from MTS without feature extraction.
problem Feature extraction step for MTS classification.
method Directly computes similarity between time series and assesses cluster structure matching labels.
result Techniques match labels well without feature extraction.
Pipeline learns topological features for protein stability prediction.
problem Predicting protein stability using topological features.
method Data-driven method to learn topological features, comparing with expert features.
result Topological features achieve 92%-99% of SME-based models' performance.
In text classification, dictionaries can be used to define human-comprehensible features. We propose an improvement to dictionary features called smoothed dictionary features. These features recognize document contexts instead of n-grams. We describe a principled methodology to solicit dictionary features from a teache…
FeAT improves OOD generalization by learning richer features.
problem Improving feature learning for out-of-distribution (OOD) generalization.
method Feature Augmented Training (FeAT) iteratively augments and retains features from different subsets of training data.
result FeAT effectively learns richer features, boosting OOD performance.
The paper defines and analyzes feature complexity in DNNs, proposing metrics for feature disentanglement and evaluation.
problem Understanding and quantifying the complexity of features learned by deep neural networks.
method Proposes a definition and disentanglement of feature complexity orders, introduces metrics for reliability and over-fitting evaluation.
result Establishes a relationship between feature complexity and DNN performance, and proposes a generic mathematical tool for network compression and knowledge distillation.
Conventional mutual information (MI) based feature selection (FS) methods are unable to handle heterogeneous feature subset selection properly because of data format differences or estimation methods of MI between feature subset and class label. A way to solve this problem is feature transformation (FT). In this study,…
A new method for measuring conditional feature importance using generative models.
problem Challenges in evaluating feature importance given other feature values.
method Adversarial Random Forest (ARF) for generating on-manifold data points.
result cARFi method yields robust importance scores adaptable for various feature importance notions.
Existing feature selection methods fail to properly account for interactions between features when evaluating feature subsets. In this paper, we attempt to remedy this issue by using orthogonal variance decomposition to evaluate features. The orthogonality of the decomposition allows us to directly calculate the total …
CAN approximates explicit feature interactions for CTR prediction.
problem Learning explicit feature interactions from sparse features.
method Co-Action Network approximates explicit pairwise feature interactions without introducing too many additional parameters.
result CAN outperforms state-of-the-art CTR models and the cartesian product method.
Proposes a new feature selection method integrating feature relationships.
problem Feature selection in machine learning models.
method Integrates feature-feature and feature-target relationships via penalized mRMR.
result Correctly identifies inactive features, reducing false discoveries.
Online feature selection has been an active research area in recent years. We propose a novel diverse online feature selection method based on Determinantal Point Processes (DPP). Our model aims to provide diverse features which can be composed in either a supervised or unsupervised framework. The framework aims to pro…
New method disentangles feature importance scores in machine learning.
problem Misinterpretation of feature importance scores due to interactions and dependencies.
method Derive DIP (Disentangled Importance) decomposition of feature importance scores.
result DIP decomposition uniquely separates standalone contributions from interactions and dependencies.
Feature selection has been proven a powerful preprocessing step for high-dimensional data analysis. However, most state-of-the-art methods tend to overlook the structural correlation information between pairwise samples, which may encapsulate useful information for refining the performance of feature selection. Moreove…
GRANITE unifies feature-based explanation methods to reduce disagreement.
problem Disagreement among feature-based explanation methods.
method GRANITE partitions feature space into regions minimizing interaction and distribution influences.
result Unified and consistent feature explanations.
Orthogonal random features approximate a Bessel kernel, offering sharper bounds than random Fourier features.
problem Approximating Gaussian kernel efficiently for large datasets.
method Use of Haar orthogonal matrices to construct orthogonal random features and analyze their bias and variance.
result Orthogonal random features approximate a Bessel kernel, not the Gaussian kernel, with sharper bounds.
New methods for assessing and visualizing feature groups in machine learning models.
problem Lack of methods for interpreting feature groups in machine learning models.
method Permutation-based, refitting, and Shapley-based techniques for grouped feature importance. Introduced a sequential procedure for identifying stable feature combinations. Developed a combined features effect plot.
result Effective methods for assessing and visualizing the importance and effect of feature groups in machine learning models.
Learning with streaming data has attracted much attention during the past few years. Though most studies consider data stream with fixed features, in real practice the features may be evolvable. For example, features of data gathered by limited-lifespan sensors will change when these sensors are substituted by new ones…
Supporting evidence for adaptive feature program across diverse models.
problem Analyzing feature learning in neural networks.
method Over-parameterized sequence models and feature error measure (FEM).
result FEM is decreasing during training of adaptive feature models.
Hermite polynomials improve private data generation by reducing feature count.
problem Infinite-dimensional features in kernel mean embedding are impractical for private data generation.
method Replace random features with Hermite polynomial features, leveraging their ordered nature.
result Hermite polynomial features yield a more accurate approximation of kernel mean embedding with fewer features.