Method treats pseudo healthy synthesis as a factor decomposition problem.
problem Creating a healthy-looking image from a pathological one.
method Adversarial training with paired or unpaired settings, combining two factors (healthy and disease) to reconstruct the input.
result Method outperforms conditional GAN and CycleGAN in generating pseudo healthy images.
Paper presents a brain tumor segmentation method using NGMM and 3D FVF.
problem Automatic brain tumor segmentation from MRIs is challenging.
method Normalized Gaussian Bayesian classifier and 3D Fluid Vector Flow algorithm.
result The method successfully segments brain tumors from MRI images.
We propose a new deep learning approach for medical imaging that copes with the problem of a small training set, the main bottleneck of deep learning, and apply it for classification of healthy and cancer cells acquired by quantitative phase imaging. The proposed method, called transferring of pre-trained generative ad…
Improved detection of brain tumours in MRIs using latent space dissimilarities.
problem Detecting tumours in brain MRIs using unsupervised learning.
method Slice-wise semi-supervised method based on dissimilarity between latent representations of images and their reconstructions.
result Improved detection results with higher resolution images and better reconstructions.
SepVAE separates patient-specific patterns from healthy ones using contrastive VAE.
problem Separating patient-specific patterns from healthy ones in medical datasets.
method SepVAE uses a contrastive VAE with disentangling and classification losses to differentiate between common and salient features.
result SepVAE outperforms previous methods in three medical applications and a CelebA dataset.
Model estimates lung well-aerated volume from CT images, independent of patient and imaging parameters.
problem Lack of clear connection between quantitative metrics in lung CT images and physiology.
method Patient-independent model using Gaussian fit to lower CT histogram data points.
result Model estimates well-aerated volume (WAVE) independent of CT reconstruction parameters and respiratory cycle.
Novel method uses image descriptors to harmonize MRI brain volumes across centers.
problem Inconsistencies in MRI brain volume measurements across different centers and scanners.
method Trained a Relevance Vector Machine (RVM) model using image descriptors to harmonize brain volumes.
result Decreases scanner and center variability while preserving measurements for longitudinal studies.
Bayesian U-Net exploits epistemic uncertainty for anomaly detection in retinal OCT images.
problem Anomaly detection in retinal OCT images using weak labels of healthy anatomy.
method Bayesian U-Net trained on weak labels of healthy anatomy, using Monte Carlo dropout for uncertainty estimation, and post-processing to transfer uncertainty to anomaly segmentations.
result Achieved a Dice index of 0.789 in an independent test set of AMD cases.
Paper uses TDA for automated Parkinson's disease classification and severity assessment.
problem Manual diagnosis of neurological diseases is time-consuming and inaccurate.
method Combines Topological Data Analysis (TDA) with machine learning on postural shift data.
result Proposes a stable and accurate method for classifying Parkinson's disease.
Generative adversarial networks have been successfully applied to inpainting in natural images. However, the current state-of-the-art models have not yet been widely adopted in the medical imaging domain. In this paper, we investigate the performance of three recently published deep learning based inpainting models: co…
Convolutional neural networks improve biopsy image classification for diagnosing Celiac Disease and Environmental Enteropathy.
problem Diagnosing Celiac Disease and Environmental Enteropathy from biopsy images due to histopathologic overlap.
method Proposed a convolutional neural network (CNN) to classify duodenal biopsy images.
result The proposed model achieves high accuracy in classifying biopsy images for CD, EE, and healthy controls.
Study compares ML and DL methods for autism classification.
problem Classifying autism from healthy individuals using rs-fMRI data.
method Developed classification frameworks for rs-fMRI connectivity patterns.
result Best model achieved 71% accuracy on multisite ABIDE I data.
Fast, accurate thalamus segmentation method for MS and ET.
problem Automated thalamic nuclei segmentation for neurological diseases.
method Cascaded multi-planar scheme with modified residual U-Net architecture.
result Statistically significant improvements in thalamus segmentation for MS and ET patients.
Unsupervised deep learning detects and localizes crop leaf diseases.
problem Automated detection and localization of crop diseases.
method Three types of autoencoders (CAE, CVAE, VQ-VAE) applied to an open-source dataset.
result VQ-VAE autoencoder outperforms in image reconstruction, anomaly removal, detection, and localization.
Meta Pseudo Labels boosts image classification accuracy to 90.2%.
problem Improving semi-supervised learning for image classification.
method Adapts a teacher network to generate better pseudo labels through student feedback.
result Achieves a new state-of-the-art top-1 accuracy of 90.2% on ImageNet.
Paper detects abnormalities in brain activity patterns using unsupervised learning.
problem Detecting abnormalities in resting-state brain activity patterns.
method Two strategies: autoencoder approach and next frame prediction.
result Both approaches can learn useful representations of rs-fMRI data for abnormality detection.
This paper studies a new Bayesian algorithm for the joint reconstruction and classification of reflectance confocal microscopy (RCM) images, with application to the identification of human skin lentigo. The proposed Bayesian approach takes advantage of the distribution of the multiplicative speckle noise affecting the …
Kernel and Multiple Kernel Canonical Correlation Analysis (CCA) are employed to classify schizophrenic and healthy patients based on their SNPs, DNA Methylation and fMRI data. Kernel and Multiple Kernel CCA are popular methods for finding nonlinear correlations between high-dimensional datasets. Data was gathered from …
MRI identifies chronic symptoms in mTBI patients.
problem Chronic symptoms in mTBI patients are hard to characterize.
method Multi-parametric MRI and low-dimensional projection.
result MRI metrics correlate with patient symptoms.
In this study, we tested the interaction effect of multimodal datasets using a novel method called the kernel method for detecting higher order interactions among biologically relevant mulit-view data. Using a semiparametric method on a reproducing kernel Hilbert space (RKHS), we used a standard mixed-effects linear mo…
Proposes a new contrastive loss for semi-supervised medical image segmentation.
problem Lack of labeled data for medical image segmentation.
method Uses pseudo-labels and a local contrastive loss to learn good local representations.
result Achieved high segmentation performance on public cardiac and prostate datasets.
Pseudo rehearsal uses non-photo-realistic images to save resources without sacrificing performance.
problem Catastrophic forgetting in neural networks when learning new tasks.
method Synthetically generate non-photo-realistic images to rehearse previous tasks.
result Non-photo-realistic images can be used for rehearsal without sacrificing performance and significantly reduce resource consumption.
Proposes a FoE prior for improving CNN performance in distribution shifts.
problem Improving CNN performance in image analysis tasks with distribution shifts.
method Uses a field-of-experts (FoE) prior to match feature distributions of test and training images.
result Outperforms previous TTA methods in lesion segmentation and most healthy tissue segmentation tasks.
Model learns image-word associations from captions using contrastive learning.
problem Phrase grounding, associating image regions to caption words.
method Optimizing word-region attention to maximize mutual information, using language model guided word substitutions for negatives.
result Model achieves 76.7% accuracy on Flickr30K Entities benchmark, a 5.7% gain from weak supervision.
Sepsis is a life-threatening disease and one of the major causes of death in hospitals. Imaging of microcirculatory dysfunction is a promising approach for automated diagnosis of sepsis. We report a machine learning classifier capable of distinguishing non-septic and septic images from dark field microcirculation video…
Machine learning analysis of neuroimaging data can accurately predict chronological age in healthy people and deviations from healthy brain ageing have been associated with cognitive impairment and disease. Here we sought to further establish the credentials of "brain-predicted age" as a biomarker of individual differe…
FixMatch combines consistency and confidence to simplify semi-supervised learning.
problem Improving model performance with unlabeled data.
method Generates pseudo-labels using weak augmentation, retains high-confidence predictions, trains on strongly augmented images.
result Achieves state-of-the-art performance on semi-supervised learning benchmarks.
Early and accurate identification of parkinsonian syndromes (PS) involving presynaptic degeneration from non-degenerative variants such as Scans Without Evidence of Dopaminergic Deficit (SWEDD) and tremor disorders, is important for effective patient management as the course, therapy and prognosis differ substantially …
Doubly robust self-training improves semi-supervised learning by balancing labeled and pseudo-labeled data.
problem Improving semi-supervised learning performance with limited labeled data.
method Introduces doubly robust self-training, a method that combines labeled and pseudo-labeled data to balance between labeled-only and pseudo-labeled-only training.
result Demonstrates superior performance of doubly robust self-training on ImageNet and nuScenes datasets.
Anomaly detection based on one-class classification algorithms is broadly used in many applied domains like image processing (e.g. detection of whether a patient is "cancerous" or "healthy" from mammography image), network intrusion detection, etc. Performance of an anomaly detection algorithm crucially depends on a ke…
Study identifies COVID-19 pneumonia from chest X-rays.
problem Identifying COVID-19 pneumonia from other types and healthy lungs using CXR images.
method Proposed a multi-class and hierarchical classification schema using CXR images, texture descriptors, and a pre-trained CNN model. Employed resampling algorithms and early/late fusion techniques.
result Achieved macro-avg F1-Score of 0.65 and F1-Score of 0.89 for COVID-19 identification in hierarchical classification scenario.
Pseudo links have two crossing types: classical crossings and indeterminate crossings. They were first introduced by Ryo Hanaki as a possible tool for analyzing images produced by electron microscopy of DNA. A normalized bracket polynomial is defined for pseudo links and then used to construct and obstruction to cosmet…
A new snake model improves segmentation of SEM images.
problem Efficiently segmenting overlapping electronic structures in SEM images.
method Geodesic tracking on projective line bundle with a geometric criterion for switching between fast spatial snakes and minimizing geodesics.
result Improved robust and automatic segmentation of overlapping electronic structures in SEM images.
A method for MRI brain tumor segmentation using feature vectors and kernel dictionary learning.
problem Segmenting brain tumor regions in MRI images.
method Extracting feature vectors, training kernel dictionaries, and selecting informative feature vectors.
result The method outperforms other methods in segmentation accuracy and reduces training time.
Chronic obstructive pulmonary disease (COPD) is a lung disease where early detection benefits the survival rate. COPD can be quantified by classifying patches of computed tomography images, and combining patch labels into an overall diagnosis for the image. As labeled patches are often not available, image labels are p…
Speech datasets for identifying Alzheimer's disease (AD) are generally restricted to participants performing a single task, e.g. describing an image shown to them. As a result, models trained on linguistic features derived from such datasets may not be generalizable across tasks. Building on prior work demonstrating th…
3D CNNs interpret brain MRI differences between men and women.
problem Interpreting 3D CNNs for voxel-wise brain MRI analysis.
method Three interpretation methods: Meaningful Perturbations, Grad CAM, and Guided Backpropagation.
result Voxel-wise 3D CNN interpretation of brain MRI data.
A new method detects anomalies in images without needing model adjustments.
problem Automatic detection of medical image anomalies for radiologists.
method Complementing VAEs with KL-divergence for anomaly localization.
result The method outperforms existing techniques in various settings.
PNDMs accelerate DDPMs by treating them as differential equations on manifolds.
problem Accelerate DDPMs while maintaining sample quality.
method Propose pseudo numerical methods (PNDMs) to solve differential equations on manifolds.
result PNDMs generate higher quality images with only 50 steps compared to 1000-step DDIMs (20x speedup).
VISION-XL improves HD video quality using latent image diffusion models.
problem Improving high-definition video quality and resolution.
method Latent image diffusion models and pseudo-batch consistent sampling.
result State-of-the-art video reconstruction across various inverse problems.
Study evaluates using multiple slices as input for CNNs in medical image segmentation.
problem Improving segmentation performance in medical images with limited computational resources.
method Compared pseudo-3D and 2D approaches using different CNN architectures and datasets.
result Multi-slice inputs did not significantly improve segmentation performance over 2D or 3D CNNs.
G-SimCLR improves unsupervised learning by clustering images into pseudo labels.
problem Improving unsupervised learning for image recognition.
method Proposes a method to cluster images into pseudo labels to batch images of the same category.
result Comparable performance enhancements on CIFAR10 and ImageNet datasets.
A novel approach stores encoded images as centroids and covariance matrices to improve classification accuracy with less memory.
problem Catastrophic forgetting and memory limitations in continual learning.
method Trains autoencoders with Neural Style Transfer to encode images, replay encoded episodes to avoid forgetting, and use centroids and covariance matrices for pseudo-images when memory is full.
result Increases classification accuracy by 13-17% over state-of-the-art methods on benchmark datasets, while requiring 78% less storage space.
Paper proposes LMM-PQS for cross-domain few-shot learning.
problem Cross-domain few-shot learning problem.
method Generates pseudo query images and fine-tunes feature extraction modules with a large margin mechanism.
result LMM-PQS outperforms baseline models in cross-domain few-shot learning.
This thesis classifies pseudo-Anosov homeomorphisms using geometric Markov partitions.
problem Classifying pseudo-Anosov homeomorphisms up to topological conjugacy.
method Algorithmic approach using geometric Markov partitions.
result Geometric type is a complete invariant of conjugation.
Algorithms for Magnetic Resonance (MR) image reconstruction from undersampled measurements exploit prior information to compensate for missing k-space data. Deep learning (DL) provides a powerful framework for extracting such information from existing image datasets, through learning, and then using it for reconstructi…
Automatically computes reference ranges for UK Biobank cardiac data.
problem Improving healthcare by discovering patterns in large-scale population data.
method Fully automatic pipeline for 3D cardiac MR image analysis.
result Statistically significant agreement between manual and automatic indexes.
DIM shows promise in predicting Alzheimer's progression.
problem Predicting Alzheimer's disease progression from brain imaging.
method Used variants of Deep InfoMax (DIM) for brain imaging analysis.
result DIM outperforms supervised AlexNet and ResNet in Alzheimer's progression prediction.