Cryo-electron microscopy (cryo-EM) is an emerging experimental method to characterize the structure of large biomolecular assemblies. Single particle cryo-EM records 2D images (so-called micrographs) of projections of the three-dimensional particle, which need to be processed to obtain the three-dimensional reconstruct…
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48 results for “particle detection”
Hybrid approach combines transformer and Bayesian filtering for robust multiple particle tracking.
problem Challenges in tracking multiple particles in noisy scenes due to combinatorial explosion of hypotheses.
method Attention-Bayesian hybrid framework using transformer for association and Bayesian filtering for pruning hypotheses.
result Improved tracking accuracy and robustness against spurious detections.
Enhanced microfluidic sensing platform for particle detection.
problem Electronically acquiring spatially separated particle information in lab-on-a-chip devices.
method Microfluidic CODES combining resistive pulse sensing and code division multiple access.
result Non-orthogonal code waveforms and machine learning for improved multiplexing.
Optimizes signal detection in particle physics by decorrelating classifiers.
problem Systematic errors in background models can mislead signal detection.
method Use optimal transport to decorrelate classifiers from protected variables, then apply semiparametric mixture model.
result Decorrelation and signal enrichment improve the stability, robustness, and power of signal detection tests.
Automatic post-picking using MAPPOS improves particle image detection from Cryo-EM micrographsstat.ML
Cryo-electron microscopy (cryo-EM) studies using single particle reconstruction are extensively used to reveal structural information on macromolecular complexes. Aiming at the highest achievable resolution, state of the art electron microscopes automatically acquire thousands of high-quality micrographs. Particles are…
Anomaly Awarenesscs.LG
Anomaly Awareness detects anomalies in particle physics and computer vision.
problem Detect anomalies in complex data sets.
method Modifies cost function to learn normal events and anomalies.
result Effective at identifying new anomalies not previously seen.
Towards a Computer Vision Particle Flowphysics.data-an
A computer vision approach improves neutral particle detection in particle flow algorithms.
problem Optimal reconstruction of particle content and kinematics in calorimeter images.
method Computer vision techniques applied to calorimeter images, using deep learning and super-resolution.
result Significantly improved reconstruction of neutral particle calorimeter energy deposits.
Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographsq-bio.QM
Cryo-electron microscopy (cryoEM) is an increasingly popular method for protein structure determination. However, identifying a sufficient number of particles for analysis (often >100,000) can take months of manual effort. Current computational approaches are limited by high false positive rates and require significant…
Paper proposes a new dataset for group anomaly detection in physics.
problem Group anomaly detection in physics.
method Development of a synthetic benchmark dataset and comparison of anomaly detection techniques.
result Demonstrated performance of anomaly detection techniques on the new dataset.
New method uses statistical physics to detect financial market manipulation.
problem Detecting financial market manipulation activities like spoofing and layering.
method Modeling order book dynamics as particle motion and using momentum measure.
result Method outperforms conventional Z-score-based anomaly detection.
We generalise the description of the dynamics of the order book of financial markets in terms of a Brownian particle embedded in a fluid of incoming, exiting and annihilating particles by presenting a model of the velocity on each side (buy and sell) independently. The improved model builds on the time-averaged number …
Coherent structure coloring: identification of coherent structures from sparse data using graph theoryphysics.flu-dyn
We present a frame-invariant method for detecting coherent structures from Lagrangian flow trajectories that can be sparse in number, as is the case in many fluid mechanics applications of practical interest. The method, based on principles used in graph coloring and spectral graph drawing algorithms, examines a measur…
Automatic trajectory recognition in Active Target Time Projection Chambers data by means of hierarchical clusteringphysics.ins-det
New algorithm clusters particle tracks for better trajectory recognition in noisy data.
problem Challenging automatic reconstruction of particle tracks from Active Target Time Projection Chambers data.
method Non-parametric algorithm based on hierarchical clustering of point triplets.
result Algorithm identifies and isolates non-analytical particle tracks with high recall and precision.
ALICE uses ML for particle identification across a wide momentum range.
problem Effective combination of detector information for particle identification.
method Machine Learning, specifically Random Forest and Domain Adaptation Neural Networks.
result Advanced ML solutions improve particle identification accuracy.
Versatile model for High Energy Physics events.
problem Modeling complex interactions in high-energy physics data.
method Energy-based probabilistic model with multi-purpose architecture.
result Achieves success in diverse applications like simulation, anomaly detection, and particle identification.
Single particle reconstruction (SPR) from cryo-electron microscopy (EM) is a technique in which the 3D structure of a molecule needs to be determined from its contrast transfer function (CTF) affected, noisy 2D projection images taken at unknown viewing directions. One of the main challenges in cryo-EM is the typically…
This paper presents the construction of a particle filter, which incorporates elements inspired by genetic algorithms, in order to achieve accelerated adaptation of the estimated posterior distribution to changes in model parameters. Specifically, the filter is designed for the situation where the subsequent data in on…
Kernel methods detect coherent structures in dynamical data.
problem Detecting coherent structures in complex dynamical systems.
method Kernel-based dimensionality reduction techniques and eigendecompositions of RKHS operators.
result Coherent sets of particle trajectories can be computed by kernel CCA.
We consider online detection strategies for identifying a change point in a stream of quantum particles allegedly prepared in identical states. We show that the identification of the change point can be done without error via sequential local measurements while attaining the optimal performance bound set by quantum mec…
New model captures state-dependent variability in partially observed systems.
problem Structured stochasticity not captured by constant-variance models.
method State-coupled stochastic volatility framework with particle expectation-maximization.
result Model consistently reduces recovery bias under partial observation.
Consensus-Based Optimization on the Sphere: Convergence to Global Minimizers and Machine Learningcs.LG
New optimization model converges to global minimizers on spheres.
problem Global optimization of nonconvex functions on spheres.
method Stochastic Kuramoto-Vicsek-type model with consensus dynamics and random perturbations.
result Proof of convergence to global minimizers under certain conditions.
Method detects new physics signals without prior knowledge.
problem Selecting signal regions for novel particles.
method Model-agnostic approach using low-pass filtering and density estimation.
result Efficiently identifies data-driven signal regions in high-dimensional feature space.
Two methods use simulation to improve anomaly detection in particle physics.
problem Artificial bumps in invariant mass spectra from machine learning classifiers.
method Simulation-assisted decorrelation techniques.
result Both methods are robust to correlations in the data and improve anomaly detection.
Paper tackles rough volatility estimation from high-frequency data.
problem Estimating historical volatility from high-frequency asset price data.
method Uses fractional Brownian motion representation and particle methods for filtering and parameter estimation.
result Demonstrates efficient estimation of rough volatility using standard techniques.
If a given behavior of a multi-agent system restricts the phase variable to a invariant manifold, then we define a phase transition as change of physical characteristics such as speed, coordination, and structure. We define such a phase transition as splitting an underlying manifold into two sub-manifolds with distinct…
The excluded area of two-dimensional hard particlescond-mat.soft
Study examines the excluded area between two-dimensional hard particles, identifying key factors affecting its magnitude.
problem Determining the excluded area between two-dimensional hard particles with various orientations and shapes.
method Used principal component analysis and Monte Carlo simulations to analyze randomly generated non-self-intersecting polygons and star lines.
result The minimum excluded area is achieved when particles are antiparallel, and elongation of the particle shape significantly affects the excluded area.
Jointly estimates flow fields and particle properties from Lagrangian data.
problem Estimating flow fields and particle properties from sparse, noisy Lagrangian data.
method Data assimilation framework coupling Eulerian and Lagrangian models.
result Joint estimation of flow fields and particle properties in various flow regimes.
Recursive Maximum Likelihood Estimation for Interacting Particle Systems using Virtual Particlesstat.ME
Estimates log-likelihood of interacting particle systems using virtual particles.
problem Inconsistent estimation of finite-particle log-likelihood in large particle systems.
method Stochastic gradient estimate using continuous trajectory and virtual particle systems.
result Convergence to stationary points of limiting mean-field system's log-likelihood.
This paper optimizes functions of probability measures using particle gradient descent for displacement convex functions.
problem Optimizing functions of probability measures with displacement convex properties.
method Particle gradient descent applied to displacement convex functions with theoretical guarantees.
result Finite number of particles and computations are sufficient to find optimal solutions for displacement convex functions.
Differentiable resampling improves particle filter performance.
problem Non-differentiability of traditional resampling in particle filters.
method Introduced a neural network resampler (particle transformer) trained with a likelihood-based loss function.
result Learned resampling outperforms traditional methods on synthetic and real-world tasks.
New sampling method improves on particle-optimization techniques.
problem Particles tend to collapse in SVGD, leading to poor sampling.
method Introduce stochastic noise to update particles, developing non-asymptotic convergence theory.
result More particles do not always improve approximation due to computational constraints.
We propose one-class support measure machines (OCSMMs) for group anomaly detection which aims at recognizing anomalous aggregate behaviors of data points. The OCSMMs generalize well-known one-class support vector machines (OCSVMs) to a space of probability measures. By formulating the problem as quantile estimation on …
We propose one-class support measure machines (OCSMMs) for group anomaly detection which aims at recognizing anomalous aggregate behaviors of data points. The OCSMMs generalize well-known one-class support vector machines (OCSVMs) to a space of probability measures. By formulating the problem as quantile estimation on …
A method for optimal Bayesian filtering using progressive particle flow and optimal transport maps.
problem Optimizing Bayesian filtering with deterministic particles to avoid degeneration.
method Progressive flow of particles through a sequence of sub-steps, each using an optimal transport map to replace non-equally weighted particles with equally weighted ones.
result The method avoids particle degeneration and simplifies the filtering process by not requiring inversions or monotonicity constraints.
Optimal weights improve particle-based approximations of discrete distributions.
problem Improving particle-based approximations of discrete distributions.
method Proving optimality of weights and showing how to compute them efficiently.
result Optimal weights can be computed from existing particle-based methods without extra costs.
Particle MCMC involves using a particle filter within an MCMC algorithm. For inference of a model which involves an unobserved stochastic process, the standard implementation uses the particle filter to propose new values for the stochastic process, and MCMC moves to propose new values for the parameters. We show how p…
Optimizes particle filtering for non-stationary environments.
problem Tracking and adapting to non-stationary environments in online prediction.
method Formulated an efficient particle filtering method using online mirror descent algorithm.
result Achieves optimal particle efficiency in non-stationary environments.
Improved particle approximation for mean-field neural networks.
problem Particle approximation error for mean-field neural networks.
method Improved particle approximation error by leveraging the problem structure in risk minimization.
result Established an LSI-constant-free particle approximation error concerning the objective gap.
A new particle filter avoids resampling to improve state estimation in high dimensions.
problem Particle deprivation in high-dimensional state spaces.
method A resampling-free particle filter designed to mitigate particle deprivation.
result The filter offers a near-accurate representation of the posterior distribution in high-dimensional contexts.
We introduce a new sequential Monte Carlo algorithm we call the particle cascade. The particle cascade is an asynchronous, anytime alternative to traditional particle filtering algorithms. It uses no barrier synchronizations which leads to improved particle throughput and memory efficiency. It is an anytime algorithm i…
Approximating Posterior Predictive Distributions by Averaging Output From Many Particle Filtersstat.ME
Paper uses averaging from many particle filters to approximate posterior predictive distributions.
problem Approximating posterior predictive distributions efficiently and accurately.
method Particle swarm filter algorithm that averages many particle filter approximations.
result Law of large numbers and central limit theorem support the method's effectiveness.
When is Particle Filtering Efficient for Planning in Partially Observed Linear Dynamical Systems?cs.LG
This paper studies when particle filtering is efficient for planning in partially observed systems.
problem The efficiency of particle filtering for planning in partially observed linear dynamical systems.
method Coupling of ideal and approximate sequences to bound particle complexity.
result Polynomially many particles suffice for stable systems to approximate optimal planning.
Interacting particle methods are increasingly used to sample from complex and high-dimensional distributions. These stochastic particle integration techniques can be interpreted as an universal acceptance-rejection sequential particle sampler equipped with adaptive and interacting recycling mechanisms. Practically, the…
New algorithm trains latent diffusion models using interacting particles.
problem Training latent diffusion models efficiently and accurately.
method Reformulate training as minimizing a free energy functional, then approximate with interacting particles.
result The new algorithm outperforms previous methods in experiments.
Paper learns particle dynamics for versatile object manipulation.
problem Challenges in traditional rigid-body physics engines for complex scenes.
method Combines learning with particle-based systems for versatile object manipulation.
result Robots achieve complex manipulation tasks using the learned simulator.
Turbo-Sim generates models from physics principles, improving interpretability and flexibility.
problem Transforming particle properties from theory to observation in collider physics.
method Maximizes mutual information between input and output, setting loss term weights.
result Mathematically interpretable and flexible generative models.
Framework expands particle filtering to estimate states beyond prior boundaries.
problem Limitations of traditional particle filtering in estimating states outside prior support.
method Diffusion-Enhanced Particle Filtering Framework with adaptive diffusion, entropy-driven regularisation, and kernel-based perturbations.
result Framework significantly improves state estimation accuracy and success rates for out-of-boundary targets.
Bayesian inference using particle flow and neural operators.
problem Efficiently updating beliefs with new data.
method ODE-based neural operator for particle flow, meta-learning for generalization.
result Generalization across different priors, observations, and sequential inference.