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arXiv research

A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

168,742 papers · 148 categories

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2356 · Oct 201919922001200920172026
48 results for mouse cortex

Deep learning models outperform classical methods in forecasting neural activity.

problem Improving forecasting of neural activity using deep learning models.
method Systematic evaluation of eight probabilistic deep learning models against classical statistical models and baseline methods.
result Several deep learning models consistently outperform classical approaches in forecasting neural activity.

This research uses Siamese networks to identify partial mouse brain images from the Allen atlas.

problem Identifying precise mouse brain microscopy images from the Allen atlas.
method Siamese Networks with contrastive learning to find corresponding atlas plates for partial images.
result Siamese CNNs achieved 25% TOP-1 and 100% TOP-5 accuracy in identifying brain slices from the Allen atlas.

New ensemble models classify mouse movement trajectories to assess survey question difficulty.

problem Assessing survey question difficulty based on respondents' interaction data.
method Ensemble models combining semi-metric-based weak learners to classify multivariate functional data.
result Improved survey data quality through better identification of respondent difficulty.

New model for visual cortex border completion using bicycle wheel motions.

problem Understanding border completion in the visual cortex V1.
method Sub-Riemannian Hamiltonian formalism and bicycle wheel analogy.
result Analogies between visual cortex border completion and bicycle wheel motions.

Modeling curvature-sensitive cells in visual cortex with geometric structures.

problem Understanding the functional architecture of curvature-sensitive cells in the visual cortex.
method Geometric model based on Engel structure and SIM(2) symmetry.
result Identified SIM(2) as the natural symmetry group for curvature-sensitive cells.

New VAE models reveal hierarchical visual cortex computations.

problem Capturing hierarchical visual cortex computations in generative models.
method Sparse coding hierarchical VAEs trained on natural images with varied generative and recognition components.
result Representations similar to those in visual cortex emerge under inductive biases.

Active learning method for neural population dynamics using optogenetics.

problem Efficiently selecting neurons to stimulate for identifying neural population dynamics.
method Developed active learning procedure for low-rank regression to determine informative photostimulation patterns.
result Demonstrated a two-fold reduction in data required for predictive power using low-rank linear dynamical systems model.

Modeling curvature-sensitive cells in visual cortex using manifold geometry.

problem Understanding how curvature influences cell function in the visual cortex.
method Developed a 4D manifold with canonical Engel structure to represent orientation, position, curvature, and scale.
result Characterized curvature-sensitive receptive profiles using left-invariant generators of the Engel structure.

The paper extends the functional geometry of the visual cortex to more complex architectures using contactization and symplectization.

problem Understanding the functional architecture of the visual cortex.
method Contactization and symplectization processes to extend the dimension of the space.
result Extension of the functional geometry of the visual cortex to more complex architectures.

We propose a primitive called PJOIN, for "predictive join," which combines and extends the operations JOIN and LINK, which Valiant proposed as the basis of a computational theory of cortex. We show that PJOIN can be implemented in Valiant's model. We also show that, using PJOIN, certain reasonably complex learning and …

2014-12-26abs ↗pdf ↗

V1 cortex reconstructs images as Poisson equation solutions with varying weights.

problem Reconstructing images from V1 cortical cell receptive profiles.
method Solves a heterogeneous Poisson equation with varying weights representing neural connectivity.
result Reconstructions converge to homogeneous solutions using homogenization techniques.

Learning and inferring features that generate sensory input is a task continuously performed by cortex. In recent years, novel algorithms and learning rules have been proposed that allow neural network models to learn such features from natural images, written text, audio signals, etc. These networks usually involve de…

2015-06-01abs ↗pdf ↗

Despite rapid advances in machine learning tools, the majority of neural decoding approaches still use traditional methods. Modern machine learning tools, which are versatile and easy to use, have the potential to significantly improve decoding performance. This tutorial describes how to effectively apply these algorit…

2017-08-02abs ↗pdf ↗

TNDE quantifies dynamic gene drivers from single-cell snapshots.

problem Reconstructing time-resolved regulatory effects in biological processes.
method Time-varying Network Driver Estimation (TNDE) using shared graph attention encoder and partial optimal transport.
result TNDE identifies stage-specific driver genes in mouse erythropoiesis.

New model improves community detection in networks with strong assortativity.

problem Classic SBMs fail to recover assortative communities in networks with reduced information.
method Introduced a constrained SBM with strong assortativity constraints and efficient algorithms.
result Significant boost in community recovery capabilities, especially close to information-theoretic threshold.

Neurons in the visual cortex are correlated in their variability. The presence of correlation impacts cortical processing because noise cannot be averaged out over many neurons. In an effort to understand the functional purpose of correlated variability, we implement and evaluate correlated noise models in deep convolu…

2018-04-03abs ↗pdf ↗

In this paper we present a novel model of the primary visual cortex (V1) based on orientation, frequency and phase selective behavior of the V1 simple cells. We start from the first level mechanisms of visual perception: receptive profiles. The model interprets V1 as a fiber bundle over the 2-dimensional retinal plane …

2019-10-11abs ↗pdf ↗

Fault-tolerant neural networks inspired by biological error correction codes.

problem Achieving reliable computation with unreliable neurons.
method Using biological error correction codes from grid cells in the mammalian cortex to develop a fault-tolerant neural network.
result Noisy biological neurons operate below a fault-tolerance threshold, suggesting a mechanism for reliable computation in the brain.

Improved cardiac arrhythmia detection in wearable devices with neural networks.

problem Resource constraints in low-power wearable devices for accurate arrhythmia detection.
method Adapted a convolutional-recurrent neural network to a low-power microcontroller, optimizing for precision and memory usage.
result Reduced F1F_1 score from 0.8 to 0.784 in fixed-point precision, with a 195.6KB memory footprint and 33.98MOps/s throughput.

Identification of patterns from discrete data time-series for statistical inference, threat detection, social opinion dynamics, brain activity prediction has received recent momentum. In addition to the huge data size, the associated challenges are, for example, (i) missing data to construct a closed time-varying compl…

2018-11-02abs ↗pdf ↗

There is growing interest in being able to run neural networks on sensors, wearables and internet-of-things (IoT) devices. However, the computational demands of neural networks make them difficult to deploy on resource-constrained edge devices. To meet this need, our work introduces a new recurrent unit architecture th…

2019-02-13abs ↗pdf ↗