A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
This study applies neural models to automatically recognize medical entities from natural language.
Neural networks (NNs) have become the state of the art in many machine learning applications, especially in image and sound processing [1]. The same, although to a lesser extent [2,3], could be said in natural language processing (NLP) tasks, such as named entity recognition. However, the success of NNs remains depende…
Deep neural network models have recently achieved state-of-the-art performance gains in a variety of natural language processing (NLP) tasks (Young, Hazarika, Poria, & Cambria, 2017). However, these gains rely on the availability of large amounts of annotated examples, without which state-of-the-art performance is rare…
Biomedical documents such as Electronic Health Records (EHRs) contain a large amount of information in an unstructured format. The data in EHRs is a hugely valuable resource documenting clinical narratives and decisions, but whilst the text can be easily understood by human doctors it is challenging to use in research …
Automatic representation learning of key entities in electronic health record (EHR) data is a critical step for healthcare informatics that turns heterogeneous medical records into structured and actionable information. Here we propose ME2Vec, an algorithmic framework for learning low-dimensional vectors of the most co…
Improves medication name inference for telemedicine and conversational agents.
Named-entity recognition (NER) aims at identifying entities of interest in a text. Artificial neural networks (ANNs) have recently been shown to outperform existing NER systems. However, ANNs remain challenging to use for non-expert users. In this paper, we present NeuroNER, an easy-to-use named-entity recognition tool…
State-of-the-art named entity recognition (NER) systems have been improving continuously using neural architectures over the past several years. However, many tasks including NER require large sets of annotated data to achieve such performance. In particular, we focus on NER from clinical notes, which is one of the mos…
Although over 100 languages are supported by strong off-the-shelf machine translation systems, only a subset of them possess large annotated corpora for named entity recognition. Motivated by this fact, we leverage machine translation to improve annotation-projection approaches to cross-lingual named entity recognition…
Laboratory testing and medication prescription are two of the most important routines in daily clinical practice. Developing an artificial intelligence system that can automatically make lab test imputations and medication recommendations can save costs on potentially redundant lab tests and inform physicians of a more…
Motivated by the need to automate medical information extraction from free-text radiological reports, we present a bi-directional long short-term memory (BiLSTM) neural network architecture for modelling radiological language. The model has been used to address two NLP tasks: medical named-entity recognition (NER) and …
Chinese named entity recognition (CNER) is an important task in Chinese natural language processing field. However, CNER is very challenging since Chinese entity names are highly context-dependent. In addition, Chinese texts lack delimiters to separate words, making it difficult to identify the boundary of entities. Be…
RoBERTa outperforms other pre-trained models in NER tasks.
Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network models for BioNER to free experts from manual feature engineering, the performan…
Hybrid AI and rule-based framework de-identifies medical imaging data.
Quantum analysis tags news for sentiment and entities.
We present a weakly-supervised data augmentation approach to improve Named Entity Recognition (NER) in a challenging domain: extracting biomedical entities (e.g., proteins) from the scientific literature. First, we train a neural NER (NNER) model over a small seed of fully-labeled examples. Second, we use a reference s…
For many natural language processing (NLP) tasks the amount of annotated data is limited. This urges a need to apply semi-supervised learning techniques, such as transfer learning or meta-learning. In this work we tackle Named Entity Recognition (NER) task using Prototypical Network - a metric learning technique. It le…
The paper introduces uncertainty quantification for NER models.
Paper fine-tunes LLaMA-3-8B for financial NER using instruction and LoRA.
The paper extends influence functions to sequence tagging tasks for better model interpretability.
Paper presents a method to train NER models without labelled data using weak supervision.
This paper proposes a machine learning approach to part-of-speech tagging and named entity recognition for Greek, focusing on the extraction of morphological features and classification of tokens into a small set of classes for named entities. The architecture model that was used is introduced. The greek version of the…
This paper describes an approach for automatic construction of dictionaries for Named Entity Recognition (NER) using large amounts of unlabeled data and a few seed examples. We use Canonical Correlation Analysis (CCA) to obtain lower dimensional embeddings (representations) for candidate phrases and classify these phra…
In this work we explored building automatic speech recognition models for transcribing doctor patient conversation. We collected a large scale dataset of clinical conversations ( hr), designed the task to represent the real word scenario, and explored several alignment approaches to iteratively improve data qua…
System helps engineers with concept recognition for SEVA.
Entity linking is the task of linking mentions of named entities in natural language text, to entities in a curated knowledge-base. This is of significant importance in the biomedical domain, where it could be used to semantically annotate a large volume of clinical records and biomedical literature, to standardized co…
Improved NER performance on imbalanced data.
Recent approaches based on artificial neural networks (ANNs) have shown promising results for named-entity recognition (NER). In order to achieve high performances, ANNs need to be trained on a large labeled dataset. However, labels might be difficult to obtain for the dataset on which the user wants to perform NER: la…
This study improves the performance of neural named entity recognition by a margin of up to 11% in F-score on the example of a low-resource language like German, thereby outperforming existing baselines and establishing a new state-of-the-art on each single open-source dataset. Rather than designing deeper and wider hy…
Named entity recognition (NER) plays an important role in text-based information retrieval. In this paper, we combine Bidirectional Long Short-Term Memory (Bi-LSTM) \cite{hochreiter1997,schuster1997} with Conditional Random Field (CRF) \cite{lafferty2001} to create a novel deep learning model for the NER problem. Each …
Existing deep active learning algorithms achieve impressive sampling efficiency on natural language processing tasks. However, they exhibit several weaknesses in practice, including (a) inability to use uncertainty sampling with black-box models, (b) lack of robustness to labeling noise, and (c) lack of transparency. I…
Hungarian text processing improved with efficient, accurate NLP pipelines.
Conversational agents such as Cortana, Alexa and Siri are continuously working on increasing their capabilities by adding new domains. The support of a new domain includes the design and development of a number of NLU components for domain classification, intents classification and slots tagging (including named entity…
HuSpaCy offers an industrial-grade Hungarian NLP toolkit.
Recently, the connectionist temporal classification (CTC) model coupled with recurrent (RNN) or convolutional neural networks (CNN), made it easier to train speech recognition systems in an end-to-end fashion. However in real-valued models, time frame components such as mel-filter-bank energies and the cepstral coeffic…
We apply mixup regularization to RNNs for improved performance.
Recently, due to the increasing popularity of social media, the necessity for extracting information from informal text types, such as microblog texts, has gained significant attention. In this study, we focused on the Named Entity Recognition (NER) problem on informal text types for Turkish. We utilized a semi-supervi…
We present an operational component of a real-world patient triage system. Given a specific patient presentation, the system is able to assess the level of medical urgency and issue the most appropriate recommendation in terms of best point of care and time to treat. We use an attention-based convolutional neural netwo…
Paper proposes ensemble distillation for well-calibrated structured prediction.
Emotions play an important role in people's life. Understanding and recognising is not only important for interpersonal communication, but also has promising applications in Human-Computer Interaction, automobile safety and medical research. This project focuses on extending the emotion recognition database, and traini…
DeTraC CNN detects COVID-19 from chest X-rays with high accuracy.
Quaternion neural networks improve distant speech recognition.
Study shows partially-typed NER datasets can match fully-typed ones in model performance.
This paper presents a comparison of a traditional hybrid speech recognition system (kaldi using WFST and TDNN with lattice-free MMI) and a lexicon-free end-to-end (TensorFlow implementation of multi-layer LSTM with CTC training) models for German syllable recognition on the Verbmobil corpus. The results show that expli…
CAggNet improves medical image segmentation by fusing coarse and fine features.
BloombergGPT is a large language model trained on financial data, outperforming existing models on financial tasks.
The paper introduces a method to measure the benefits of incidental supervision signals.