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arXiv research

A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

168,695 papers · 148 categories

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265177102 · Jun 202019922001200920172026
48 results for mathematical knots

Mathematical pipeline identifies structural homology of knotted proteins.

problem Quantification and classification of protein structures, especially knotted proteins, require noise-free and complete data.
method Developed a geometric framework using persistent homology to analyze protein structures.
result Persistent homology accurately represents structural homology of knotted proteins and identifies geometric features of protein entanglement.

Paper explores the Jones polynomial and its impact on knot theory and related fields.

problem Exploring the Jones polynomial and its applications in knot theory.
method Recalling the Jones polynomial and its development, discussing its connections to various mathematical and physical contexts.
result The Jones polynomial has wide-ranging applications and connections in mathematics and physics.

This paper explores the problem of unknotting closed braids and classical knots in mathematical knot theory. We apply evolutionary computation methods to learn sequences of moves that simplify knot diagrams, and show that this can be effective both when the evolution is carried out for individual knots and when a gener…

2013-02-04abs ↗pdf ↗

We review the string/gauge theory duality relating Chern-Simons theory and topological strings on noncompact Calabi-Yau manifolds, as well as its mathematical implications for knot invariants and enumerative geometry.

2002-10-15abs ↗pdf ↗

The lattice stick number of a knot type is defined to be the minimal number of straight line segments required to construct a polygon presentation of the knot type in the cubic lattice. In this paper, we mathematically prove that the trefoil knot 313_1 and the figure-8 knot 414_1 are the only knot types of lattice stic…

2015-12-11abs ↗pdf ↗

This paper explores the interactions between knot theory and quantum computing. On one side, knot theory has been used to create models of quantum computing, and on the other, it is a source of computational problems. Knot theory is often used to introduce topological idea to people without a formal mathematical backgr…

2019-01-09abs ↗pdf ↗

We provide various formulations of knot homology that are predicted by string dualities. In addition, we also explain the rich algebraic structure of knot homology which can be understood in terms of geometric representation theory in these formulations. These notes are based on lectures in the workshop "Physics and Ma…

2015-10-07abs ↗pdf ↗

This article offers an introductory look at Khovanov homology and its historical context.

problem Classifying knot embeddings and understanding their homology.
method Expository presentation of Khovanov homology and its historical development.
result Introduction and popularization of knot theory and Khovanov homology in Colombia and Latin America.

The protein recombinase can change the knot type of circular DNA. The action of a recombinase converting one knot into another knot is normally mathematically modeled by band surgery. Band surgeries on a 2-bridge knot N((4mn-1)/(2m)) yielding a (2,2k)-torus link are characterized. We apply this and other rational tangl…

2011-08-03abs ↗pdf ↗

This paper gives mathematical models for flat knotted ribbons, and makes specific conjectures for the least length of ribbon (for a given width) needed to tie the trefoil knot and the figure eight knot. The first conjecture states that (for width one) the least length of ribbon needed to tie an open-ended trefoil knot …

2004-03-02abs ↗pdf ↗

New mathematical tools for studying knots and links.

problem Understanding knot and link diagrams using topological invariants.
method Introducing Khovanov Laplacian and Khovanov Dirac to study diagrams.
result The harmonic spectrum retains Khovanov homology invariants, while non-harmonic spectra reveal additional information.

We consider the existence of simple closed geodesics or "geodesic knots" in finite volume orientable hyperbolic 3-manifolds. Previous results show that at least one geodesic knot always exists [Bull. London Math. Soc. 31(1) (1999) 81-86], and that certain arithmetic manifolds contain infinitely many geodesic knots [J. …

2009-06-30abs ↗pdf ↗

This is a report on our ongoing research on a combinatorial approach to knot recognition, using coloring of knots by certain algebraic objects called quandles. The aim of the paper is to summarize the mathematical theory of knot coloring in a compact, accessible manner, and to show how to use it for computational purpo…

2015-05-25abs ↗pdf ↗

Study knot diagrams on a sphere without vertical lines, focusing on minimal crossings.

problem Understanding minimal crossings of knot diagrams on a punctured sphere.
method Mathematical model of string figures using knot diagrams on xyzxyz-space with missing vertical lines, analyzing minimal crossings under Reidemeister moves.
result Minimal number of crossings of knot diagrams on a punctured sphere.

Computational topology is a vibrant contemporary subfield and this article integrates knot theory and mathematical visualization. Previous work on computer graphics developed a sequence of smooth knots that were shown to converge point wise to a piecewise linear (PL) approximant. This is extended to isotopic convergenc…

2016-03-28abs ↗pdf ↗

Knot mosaic theory was introduced by Lomonaco and Kauffman in the paper on `Quantum knots and mosaics' to give a precise and workable definition of quantum knots, intended to represent an actual physical quantum system. A knot (m,n)-mosaic is an m ⁣× ⁣nm \! \times \! n matrix whose entries are eleven mosaic tiles, represent…

2017-03-15abs ↗pdf ↗

The FitzHugh-Nagumo equation provides a simple mathematical model of cardiac tissue as an excitable medium hosting spiral wave vortices. Here we present extensive numerical simulations studying long-term dynamics of knotted vortex string solutions for all torus knots up to crossing number 11. We demonstrate that FitzHu…

2017-06-20abs ↗pdf ↗

Topological gauge theories in four dimensions which admit surface operators provide a natural framework for realizing homological knot invariants. Every such theory leads to an action of the braid group on branes on the corresponding moduli space. This action plays a key role in the construction of homological knot inv…

2007-06-18abs ↗pdf ↗

The goal of this book is to characterize algebraically the closed 4-manifolds that fibre nontrivially or admit geometries in the sense of Thurston, or which are obtained by surgery on 2-knots, and to provide a reference for the topology of such manifolds and knots. The first chapter is purely algebraic. The rest of the…

2002-12-10abs ↗pdf ↗

This paper formulates a generalization of our work on quantum knots to explain how to make quantum versions of algebraic, combinatorial and topological structures. We include a description of previous work on the construction of Hilbert spaces from the states of the bracket polynomial with applications to algorithms fo…

2011-05-01abs ↗pdf ↗

Determining when two knots are equivalent (more precisely isotopic) is a fundamental problem in topology. Here we formulate this problem in terms of Predicate Calculus, using the formulation of knots in terms of braids and some basic topological results. Concretely, Knot theory is formulated in terms of a language with…

2012-09-17abs ↗pdf ↗

In his pioneering work from 1969, Jerry Levine introduced a complete set of invariants of algebraic concordance of knots. The evaluation of these invariants requires a factorization of the Alexander polynomial of the knot, and is therefore in practice often hard to realize. We thus propose the study of an alternative s…

2008-06-19abs ↗pdf ↗

A new type of knot energy is presented via real life experiments involving a thin resilient metallic tube. Knotted in different ways, the device mechanically acquires a uniquely determined (up to isometry) normal form at least when the original knot diagram has a small number of crossings, thus outperforming the famous…

2010-11-22abs ↗pdf ↗

Long, flexible physical filaments are naturally tangled and knotted, from macroscopic string down to long-chain molecules. The existence of knotting in a filament naturally affects its configuration and properties, and may be very stable or disappear rapidly under manipulation and interaction. Knotting has been previou…

2016-11-18abs ↗pdf ↗

Study of knotted defects in smectic liquid crystals using topological knot theory.

problem Understanding the topological structure of knotted defects in smectic liquid crystals.
method Investigation of screw and edge dislocations, focusing on their radial surface structure and knot fibration.
result Established a connection between smectic defects and knot theory, revealing the topological knotting of defects.

We describe in this note a new invariant of rooted trees. We argue that the invariant is interesting on it own, and that it has connections to knot theory and homological algebra. However, the real reason that we propose this invariant to readers is that we deal here with an elementary, interesting, new mathematics, an…

2015-12-09abs ↗pdf ↗

In this paper, we study a geometric/topological measure of knots and links called the nullification number. The nullification of knots/links is believed to be biologically relevant. For example, in DNA topology, one can intuitively regard it as a way to measure how easily a knotted circular DNA can unknot itself throug…

2011-01-06abs ↗pdf ↗

The real points of the Deligne-Knudsen-Mumford moduli space of marked points on the sphere has a natural tiling by associahedra. We extend this idea to create a moduli space tiled by cyclohedra. We explore the structure of this space, coming from blow-ups of hyperplane arrangements, as well as discuss possibilities of …

2001-02-20abs ↗pdf ↗

We discuss relations between quantum BPS invariants defined in terms of a product decomposition of certain series, and difference equations (quantum A-polynomials) that annihilate such series. We construct combinatorial models whose structure is encoded in the form of such difference equations, and whose generating fun…

2016-08-23abs ↗pdf ↗

In the previous three papers in this series, [WKO1]-[WKO3] (arXiv:1405.1956, arXiv:1405.1955, and to appear), Z. Dancso and I studied a certain theory of "homomorphic expansions" of "w-knotted objects", a certain class of knotted objects in 4-dimensional space. When all layers of interpretation are stripped off, what r…

2015-11-17abs ↗pdf ↗