Similarity-based clustering and semi-supervised learning methods separate the data into clusters or classes according to the pairwise similarity between the data, and the pairwise similarity is crucial for their performance. In this paper, we propose a novel discriminative similarity learning framework which learns dis…
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48 results for “kernel similarity”
Meta-learning framework uses task similarity through nonparametric kernel regression.
problem Limited tasks and outliers/dissimilar tasks hinder meta-learning performance.
method Nonparametric kernel regression to quantify and use task similarity.
result Meta-learning algorithm outperforms existing methods in task-limited settings.
Graph kernels assess graph similarity for various applications.
problem Assessing similarity between graphs for predictions.
method Review and comparison of existing graph kernels.
result State-of-the-art graph kernels reviewed and compared.
Given only information in the form of similarity triplets "Object A is more similar to object B than to object C" about a data set, we propose two ways of defining a kernel function on the data set. While previous approaches construct a low-dimensional Euclidean embedding of the data set that reflects the given similar…
We propose a new method to model multi-way similarities into hypergraphs for clustering.
problem Clustering real-valued data using hypergraphs with multi-way similarities.
method Formulate multi-way similarities using kernel functions, establish connections to hypergraph cut, and develop a fast spectral clustering algorithm.
result Our method outperforms existing graph and heuristic modeling methods in clustering performance.
Neural network learns kernel functions for survival analysis and prediction intervals.
problem Predicting survival times for individuals based on similar training subjects.
method Develops a neural network framework to learn kernel functions for kernel survival analysis and uses these to construct valid prediction intervals.
result Neural network survival estimators are competitive with existing methods and provide valid prediction intervals.
Similarity plays a fundamental role in many areas, including data mining, machine learning, statistics and various applied domains. Inspired by the success of ensemble methods and the flexibility of trees, we propose to learn a similarity kernel called rpf-kernel through random projection forests (rpForests). Our theor…
Extends Tanimoto kernel to real-valued functions.
problem Measuring similarity between real-valued functions.
method Unified representation of real-valued functions via sets, derived general form of the kernel, explicit feature representation, and smooth approximation.
result General Tanimoto kernel for real-valued functions.
Many similarity-based clustering methods work in two separate steps including similarity matrix computation and subsequent spectral clustering. However, similarity measurement is challenging because it is usually impacted by many factors, e.g., the choice of similarity metric, neighborhood size, scale of data, noise an…
Many contemporary statistical learning methods assume a Euclidean feature space. This paper presents a method for defining similarity based on hyperspherical geometry and shows that it often improves the performance of support vector machine compared to other competing similarity measures. Specifically, the idea of usi…
A new kernel measures brain network similarities, improving disease classification.
problem Lack of edge weight information in existing graph kernels for brain connectivity networks.
method Ordinal pattern kernel for weighted brain connectivity networks.
result The ordinal pattern kernel achieves better classification performance than state-of-the-art graph kernels.
Kernelized Taylor diagram visualizes data populations with fewer assumptions.
problem Limitations of Taylor diagram in capturing non-linear relationships and sensitivity to outliers.
method Proposes a kernelized version of the Taylor diagram that uses maximum mean discrepancy and kernel mean embedding.
result Kernelized Taylor diagram visualizes data populations with minimal assumptions of data distributions.
Despite the success of the popular kernelized support vector machines, they have two major limitations: they are restricted to Positive Semi-Definite (PSD) kernels, and their training complexity scales at least quadratically with the size of the data. Many natural measures of similarity between pairs of samples are not…
In this paper, we first give a direct proof for two recurrence relations of the heat kernels for hyperbolic spaces in \cite{DM}. Then, by similar computation, we give two similar recurrence relations of the heat kernels for spheres. Finally, as an application, we compute the diagonal of heat kernels for odd dimensional…
Enhances graph neural networks by considering feature similarities in node aggregation.
problem Ignoring node feature similarities in traditional graph aggregation schemes.
method Interprets node aggregation as kernel weighting, proposing a framework that considers feature similarities.
result Proposed framework outperforms traditional GCNs in real-world applications.
Kernel alignment measures the degree of similarity between two kernels. In this paper, inspired from kernel alignment, we propose a new Linear Discriminant Analysis (LDA) formulation, kernel alignment LDA (kaLDA). We first define two kernels, data kernel and class indicator kernel. The problem is to find a subspace to …
Kernels for structured data are commonly obtained by decomposing objects into their parts and adding up the similarities between all pairs of parts measured by a base kernel. Assignment kernels are based on an optimal bijection between the parts and have proven to be an effective alternative to the established convolut…
This review introduces graph kernels for chemoinformatics.
problem Quantifying similarity between molecular graphs.
method Graph kernels as a method for quantifying molecular graph similarity.
result Graph kernels have direct applications in chemoinformatics.
Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the incorporation of nonlinearity. However, most existing kernel-based graph learning mechanism…
Graph-structured data arise ubiquitously in many application domains. A fundamental problem is to quantify their similarities. Graph kernels are often used for this purpose, which decompose graphs into substructures and compare these substructures. However, most of the existing graph kernels do not have the property of…
Emergence of Globally Attracting Fixed Points in Deep Neural Networks With Nonlinear Activationscs.LG
The paper studies how neural networks evolve representations, finding a unique fixed point for nonlinear activations.
problem Understanding how neural networks transform input data across layers.
method Theoretical framework for the evolution of the kernel sequence, using mean-field regime and Hermite polynomials.
result For nonlinear activations, the kernel sequence converges globally to a unique fixed point.
Producing overlapping schemes is a major issue in clustering. Recent proposed overlapping methods relies on the search of an optimal covering and are based on different metrics, such as Euclidean distance and I-Divergence, used to measure closeness between observations. In this paper, we propose the use of another meas…
Measuring similarity between two objects is the core operation in existing clustering algorithms in grouping similar objects into clusters. This paper introduces a new similarity measure called point-set kernel which computes the similarity between an object and a set of objects. The proposed clustering procedure utili…
Kernel methods summarize and integrate posterior similarity matrices from Bayesian clustering.
problem Summarizing and integrating posterior similarity matrices from Bayesian clustering.
method Positive semi-definite PSMs, kernel matrices, kernel methods, combining kernels.
result Kernel methods effectively summarize and integrate posterior similarity matrices.
The method of "random Fourier features (RFF)" has become a popular tool for approximating the "radial basis function (RBF)" kernel. The variance of RFF is actually large. Interestingly, the variance can be substantially reduced by a simple normalization step as we theoretically demonstrate. We name the improved scheme …
Data similarity is a key concept in many data-driven applications. Many algorithms are sensitive to similarity measures. To tackle this fundamental problem, automatically learning of similarity information from data via self-expression has been developed and successfully applied in various models, such as low-rank repr…
This work analyzes when contrastive models are close to PCA or kernel methods.
problem Understanding when contrastive models are equivalent to kernel methods or PCA.
method Analyzing the training dynamics of two-layer contrastive models with non-linear activation.
result Wide contrastive models with cosine similarity based losses are close to PCA.
Laplace kernel and Neural Tangent Kernels are shown to be nearly identical for normalized data.
problem Understanding the similarity between Laplace and Neural Tangent Kernels.
method Theoretical analysis and experiments on normalized data.
result Laplace kernel and Neural Tangent Kernels have nearly identical eigenfunctions and RKHS for normalized data.
We propose a simple kernel based nearest neighbor approach for handwritten digit classification. The "distance" here is actually a kernel defining the similarity between two images. We carefully study the effects of different number of neighbors and weight schemes and report the results. With only a few nearest neighbo…
Background: The problem of predicting whether a drug combination of arbitrary orders is likely to induce adverse drug reactions is considered in this manuscript. Methods: Novel kernels over drug combinations of arbitrary orders are developed within support vector machines for the prediction. Graph matching methods are …
Gaussian Processes (GPs) are known to provide accurate predictions and uncertainty estimates even with small amounts of labeled data by capturing similarity between data points through their kernel function. However traditional GP kernels are not very effective at capturing similarity between high dimensional data poin…
Improves Bayesian optimization efficiency for mixed variable spaces.
problem Boosting sample efficiency in Bayesian optimization for mixed variable spaces.
method Proposes frequency modulated (FM) kernels to model complex dependencies across different types of variables.
result BO-FM outperforms competitors in various optimization problems.
Autoencoders learn data representations (codes) in such a way that the input is reproduced at the output of the network. However, it is not always clear what kind of properties of the input data need to be captured by the codes. Kernel machines have experienced great success by operating via inner-products in a theoret…
We show that the output of a (residual) convolutional neural network (CNN) with an appropriate prior over the weights and biases is a Gaussian process (GP) in the limit of infinitely many convolutional filters, extending similar results for dense networks. For a CNN, the equivalent kernel can be computed exactly and, u…
Improved forecasting of suicide attempts using LSGPs for patients with little data.
problem Challenges in predicting suicide attempts due to their rarity and patient heterogeneity.
method Introduced Latent Similarity Gaussian Processes (LSGPs) to capture patient heterogeneity.
result LSGPs outperform baseline models, even without kernel-design, and offer new insights into patient similarity.
We investigate iterated compositions of weighted sums of Gaussian kernels and provide an interpretation of the construction that shows some similarities with the architectures of deep neural networks. On the theoretical side, we show that these kernels are universal and that SVMs using these kernels are universally con…
New algorithms optimize multiple tasks with shared similarities, reducing regret.
problem Optimizing multiple objectives with shared similarities in non-parametric Bayesian optimization.
method Developed two novel BO algorithms using multi-task kernels and random scalarizations.
result Derived worst-case regret bounds capturing inter-task similarities.
Simplifies fair PCA with fast, efficient solution.
problem Learning fair low-rank approximations of data.
method Conceptually simple approach with analytic solution.
result Faster and similar results to existing fair PCA methods.
kdiff measures distances for time series and structured data.
problem Estimating distances between time series and structured data.
method kdiff uses non-linear kernel distances based on matching overlapping distributions.
result kdiff is more robust to noise and partial occlusions.
Measuring the similarity of two files is an important task in malware analysis, with fuzzy hash functions being a popular approach. Traditional fuzzy hash functions are data agnostic: they do not learn from a particular dataset how to determine similarity; their behavior is fixed across all datasets. In this paper, we …
This paper introduces the concept of kernels on fuzzy sets as a similarity measure for -valued functions, a.k.a. \emph{membership functions of fuzzy sets}. We defined the following classes of kernels: the cross product, the intersection, the non-singleton and the distance-based kernels on fuzzy sets. Applicabili…
In this paper, we propose the distributed tree kernels (DTK) as a novel method to reduce time and space complexity of tree kernels. Using a linear complexity algorithm to compute vectors for trees, we embed feature spaces of tree fragments in low-dimensional spaces where the kernel computation is directly done with dot…
Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is still ill-posed and the state-of-the-art methods are heavily based on heuristics.…
A new graph kernel uses LCS and Wasserstein distance for better graph comparisons.
problem Graph learning methods can be limited by information from distant vertices and path length constraints.
method Proposes a Graph Kernel based on LCS similarity and Wasserstein distance in a novel metric space.
result The new kernel emphasizes comparisons between similar paths and reduces information loss.
Spectral clustering has found extensive use in many areas. Most traditional spectral clustering algorithms work in three separate steps: similarity graph construction; continuous labels learning; discretizing the learned labels by k-means clustering. Such common practice has two potential flaws, which may lead to sever…
Unified understanding of neural representation similarity measures.
problem Fragmented research landscape of neural network similarity measures.
method Observation and exploration of connections between shape distances and normalized Bures similarity.
result Cosine of the Riemannian shape distance equals normalized Bures similarity.
This paper explores using SSIM for better image generation in generative models.
problem Improving perceptual quality in generated images using norm.
method Theoretical discussion and practical implementation of SSIM in generative models and autoencoders.
result SSIM can be used in generative models and autoencoders to generate better images.
Kernel functions in support vector machines (SVM) are needed to assess the similarity of input samples in order to classify these samples, for instance. Besides standard kernels such as Gaussian (i.e., radial basis function, RBF) or polynomial kernels, there are also specific kernels tailored to consider structure in t…