New tools for uncertainty in dynamical systems without distribution assumptions.
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Bayesian approach models neurodegenerative diseases without clinical labels.
Develops inference combinators for probabilistic programs using neural networks.
Probabilistic techniques are central to data analysis, but different approaches can be difficult to apply, combine, and compare. This paper introduces composable generative population models (CGPMs), a computational abstraction that extends directed graphical models and can be used to describe and compose a broad class…
There is a widespread need for techniques that can discover structure from time series data. Recently introduced techniques such as Automatic Bayesian Covariance Discovery (ABCD) provide a way to find structure within a single time series by searching through a space of covariance kernels that is generated using a simp…
PClean automates Bayesian data cleaning for specific datasets.
Stochastic programs simplify complex models with noise and nondeterminism.
Improves probabilistic programming by analyzing program structure.
We propose design guidelines for a probabilistic programming facility suitable for deployment as a part of a production software system. As a reference implementation, we introduce Infergo, a probabilistic programming facility for Go, a modern programming language of choice for server-side software development. We argu…
We describe a method to perform functional operations on probability distributions of random variables. The method uses reproducing kernel Hilbert space representations of probability distributions, and it is applicable to all operations which can be applied to points drawn from the respective distributions. We refer t…
We present a new algorithm for approximate inference in probabilistic programs, based on a stochastic gradient for variational programs. This method is efficient without restrictions on the probabilistic program; it is particularly practical for distributions which are not analytically tractable, including highly struc…
We develop a technique for generalising from data in which models are samplers represented as program text. We establish encouraging empirical results that suggest that Markov chain Monte Carlo probabilistic programming inference techniques coupled with higher-order probabilistic programming languages are now sufficien…
Forward inference techniques such as sequential Monte Carlo and particle Markov chain Monte Carlo for probabilistic programming can be implemented in any programming language by creative use of standardized operating system functionality including processes, forking, mutexes, and shared memory. Exploiting this we have …
Probabilistic programming is a powerful abstraction for statistical machine learning. Applying static analysis methods to probabilistic programs could serve to optimize the learning process, automatically verify properties of models, and improve the programming interface for users. This field of static analysis for pro…
MultiVerse uses importance sampling for efficient causal reasoning in probabilistic programming.
New method reduces infinite variance in probabilistic programs with rejection sampling.
This work offers a broad perspective on probabilistic modeling and inference in light of recent advances in probabilistic programming, in which models are formally expressed in Turing-complete programming languages. We consider a typical workflow and how probabilistic programming languages can help to automate this wor…
This book is a graduate-level introduction to probabilistic programming. It not only provides a thorough background for anyone wishing to use a probabilistic programming system, but also introduces the techniques needed to design and build these systems. It is aimed at people who have an undergraduate-level understandi…
Probabilistic programming languages represent complex data with intermingled models in a few lines of code. Efficient inference algorithms in probabilistic programming languages make possible to build unified frameworks to compute interesting probabilities of various large, real-world problems. When the structure of mo…
SPPL simplifies probabilistic programming for exact inference.
New method for efficient probabilistic inference using masked language modeling.
We extend probabilistic programming to handle conditioning on marginal distributions.
In this work, we explore how probabilistic programs can be used to represent policies in sequential decision problems. In this formulation, a probabilistic program is a black-box stochastic simulator for both the problem domain and the agent. We relate classic policy gradient techniques to recently introduced black-box…
A new method for efficient inference in probabilistic programs with mixed support.
DynamicPPL speeds up probabilistic modeling in Julia.
Probabilistic inference procedures are usually coded painstakingly from scratch, for each target model and each inference algorithm. We reduce this effort by generating inference procedures from models automatically. We make this code generation modular by decomposing inference algorithms into reusable program-to-progr…
UM trains a neural network to approximate marginal distributions in probabilistic programs.
TensorFlow Probability introduces JointDistributions for probabilistic programming.
We introduce an approximate search algorithm for fast maximum a posteriori probability estimation in probabilistic programs, which we call Bayesian ascent Monte Carlo (BaMC). Probabilistic programs represent probabilistic models with varying number of mutually dependent finite, countable, and continuous random variable…
Improved inference in probabilistic programs using attention mechanisms.
Pyro is a probabilistic programming language built on Python as a platform for developing advanced probabilistic models in AI research. To scale to large datasets and high-dimensional models, Pyro uses stochastic variational inference algorithms and probability distributions built on top of PyTorch, a modern GPU-accele…
Probabilistic programs with dynamic computation graphs can define measures over sample spaces with unbounded dimensionality, which constitute programmatic analogues to Bayesian nonparametrics. Owing to the generality of this model class, inference relies on `black-box' Monte Carlo methods that are often not able to tak…
NP-HMC extends HMC for nonparametric models in probabilistic programming.
We introduce a method for using deep neural networks to amortize the cost of inference in models from the family induced by universal probabilistic programming languages, establishing a framework that combines the strengths of probabilistic programming and deep learning methods. We call what we do "compilation of infer…
Probabilistic modeling enables combining domain knowledge with learning from data, thereby supporting learning from fewer training instances than purely data-driven methods. However, learning probabilistic models is difficult and has not achieved the level of performance of methods such as deep neural networks on many …
Particle Markov chain Monte Carlo techniques rank among current state-of-the-art methods for probabilistic program inference. A drawback of these techniques is that they rely on importance resampling, which results in degenerate particle trajectories and a low effective sample size for variables sampled early in a prog…
dynestyx: A library for probabilistic programming of dynamical systems
Guaranteed bounds for posterior inference in probabilistic programs.
This abstract extends on the previous work (arXiv:1407.2646, arXiv:1606.00075) on program induction using probabilistic programming. It describes possible further steps to extend that work, such that, ultimately, automatic probabilistic program synthesis can generalise over any reasonable set of inputs and outputs, in …
Hamiltonian Monte Carlo (HMC) is arguably the dominant statistical inference algorithm used in most popular "first-order differentiable" Probabilistic Programming Languages (PPLs). However, the fact that HMC uses derivative information causes complications when the target distribution is non-differentiable with respect…
Probabilistic programming allows specification of probabilistic models in a declarative manner. Recently, several new software systems and languages for probabilistic programming have been developed on the basis of newly developed and improved methods for approximate inference in probabilistic models. In this contribut…
Framework uses probabilistic programming for physics simulation in games.
Gaussian Processes (GPs) are widely used tools in statistics, machine learning, robotics, computer vision, and scientific computation. However, despite their popularity, they can be difficult to apply; all but the simplest classification or regression applications require specification and inference over complex covari…
Unified framework for learning flexible probabilistic programs using DPP and PAC-Bayes bounds.
NumPyro accelerates probabilistic programming with JAX transformations.
Many practical techniques for probabilistic inference require a sequence of distributions that interpolate between a tractable distribution and an intractable distribution of interest. Usually, the sequences used are simple, e.g., based on geometric averages between distributions. When models are expressed as probabili…
Novel approach trains LLMs for inductive reasoning using probabilistic programs.
We introduce and demonstrate a new approach to inference in expressive probabilistic programming languages based on particle Markov chain Monte Carlo. Our approach is simple to implement and easy to parallelize. It applies to Turing-complete probabilistic programming languages and supports accurate inference in models …