A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
Locally adaptive clustering for tree delineation.
MultiDendrograms is a Java-written application that computes agglomerative hierarchical clusterings of data. Starting from a distances (or weights) matrix, MultiDendrograms is able to calculate its dendrograms using the most common agglomerative hierarchical clustering methods. The application implements a variable-gro…
The Ward error sum of squares hierarchical clustering method has been very widely used since its first description by Ward in a 1963 publication. It has also been generalized in various ways. However there are different interpretations in the literature and there are different implementations of the Ward agglomerative …
Agglomerative hierarchical clustering can be implemented with several strategies that differ in the way elements of a collection are grouped together to build a hierarchy of clusters. Here we introduce versatile linkage, a new infinite system of agglomerative hierarchical clustering strategies based on generalized mean…
We survey agglomerative hierarchical clustering algorithms and discuss efficient implementations that are available in R and other software environments. We look at hierarchical self-organizing maps, and mixture models. We review grid-based clustering, focusing on hierarchical density-based approaches. Finally we descr…
Fair HAC algorithms ensure clustering fairness across protected groups.
We introduce a new Bayesian model for hierarchical clustering based on a prior over trees called Kingman's coalescent. We develop novel greedy and sequential Monte Carlo inferences which operate in a bottom-up agglomerative fashion. We show experimentally the superiority of our algorithms over others, and demonstrate o…
New clustering method recovers hidden tree structure from data.
Standard agglomerative clustering suggests establishing a new reliable linkage at every step. However, in order to provide adaptive, density-consistent and flexible solutions, we study extracting all the reliable linkages at each step, instead of the smallest one. Such a strategy can be applied with all common criteria…
The Baire metric induces an ultrametric on a dataset and is of linear computational complexity, contrasted with the standard quadratic time agglomerative hierarchical clustering algorithm. In this work we evaluate empirically this new approach to hierarchical clustering. We compare hierarchical clustering based on the …
Bayesian hierarchical clustering (BHC) is an agglomerative clustering method, where a probabilistic model is defined and its marginal likelihoods are evaluated to decide which clusters to merge. While BHC provides a few advantages over traditional distance-based agglomerative clustering algorithms, successive evaluatio…
This paper presents algorithms for hierarchical, agglomerative clustering which perform most efficiently in the general-purpose setup that is given in modern standard software. Requirements are: (1) the input data is given by pairwise dissimilarities between data points, but extensions to vector data are also discussed…
Hierarchical graph clustering is a common technique to reveal the multi-scale structure of complex networks. We propose a novel metric for assessing the quality of a hierarchical clustering. This metric reflects the ability to reconstruct the graph from the dendrogram, which encodes the hierarchy. The optimal represent…
A clustering algorithm for natural hierarchical clusters with near-linear time complexity.
Agglomerative hierarchical clustering (AHC) requires only the similarity between objects to be known. This is attractive when clustering signals of varying length, such as speech, which are not readily represented in fixed-dimensional vector space. However, AHC is characterised by space and time complexity, ma…
We examine methods for clustering in high dimensions. In the first part of the paper, we perform an experimental comparison between three batch clustering algorithms: the Expectation-Maximization (EM) algorithm, a winner take all version of the EM algorithm reminiscent of the K-means algorithm, and model-based hierarch…
Paper tackles noisy comparison oracle for robust clustering algorithms.
Hierarchical clustering uses OWA operators to generalize linkage methods and avoid dendrogram inversions.
Grinch efficiently clusters large datasets with complex structures.
Method selects valid IVs from a large set using clustering and test of overidentifying restrictions.
Hierarchical structure is ubiquitous in data across many domains. There are many hierarchical clustering methods, frequently used by domain experts, which strive to discover this structure. However, most of these methods limit discoverable hierarchies to those with binary branching structure. This limitation, while com…
Improves hierarchical clustering in Euclidean space using autoencoders.
New method uses dendrograms for better mixture model selection and clustering.
Randomized hierarchical clustering tests for stability and detects clusters.
Data aggregation improves HAC for resource-constrained systems.
Proposes selective inference for testing differences in means between clusters.
Hierarchical clustering is a widely used approach for clustering datasets at multiple levels of granularity. Despite its popularity, existing algorithms such as hierarchical agglomerative clustering (HAC) are limited to the offline setting, and thus require the entire dataset to be available. This prohibits their use o…
Method preserves order in hierarchical clustering of ordered data.
This manuscript develops the theory of agglomerative clustering with Bregman divergences. Geometric smoothing techniques are developed to deal with degenerate clusters. To allow for cluster models based on exponential families with overcomplete representations, Bregman divergences are developed for nondifferentiable co…
We present an approach to model-based hierarchical clustering by formulating an objective function based on a Bayesian analysis. This model organizes the data into a cluster hierarchy while specifying a complex feature-set partitioning that is a key component of our model. Features can have either a unique distribution…
In this paper, we deal with the problem of curves clustering. We propose a nonparametric method which partitions the curves into clusters and discretizes the dimensions of the curve points into intervals. The cross-product of these partitions forms a data-grid which is obtained using a Bayesian model selection approach…
Symbolic Data Analysis is based on special descriptions of data - symbolic objects (SO). Such descriptions preserve more detailed information about units and their clusters than the usual representations with mean values. A special kind of symbolic object is a representation with frequency or probability distributions …
This paper presents a novel adaptive resonance theory (ART)-based modular architecture for unsupervised learning, namely the distributed dual vigilance fuzzy ART (DDVFA). DDVFA consists of a global ART system whose nodes are local fuzzy ART modules. It is equipped with the distinctive features of distributed higher-ord…
The study uses DCC for financial market analysis, revealing hidden correlations.
Dynamic time warping (DTW) can be used to compute the similarity between two sequences of generally differing length. We propose a modification to DTW that performs individual and independent pairwise alignment of feature trajectories. The modified technique, termed feature trajectory dynamic time warping (FTDTW), is a…
The Baire metric induces an ultrametric on a dataset and is of linear computational complexity, contrasted with the standard quadratic time agglomerative hierarchical clustering algorithm. We apply the Baire distance to spectrometric and photometric redshifts from the Sloan Digital Sky Survey using, in this work, about…
Collimated streams of particles produced in high energy physics experiments are organized using clustering algorithms to form jets. To construct jets, the experimental collaborations based at the Large Hadron Collider (LHC) primarily use agglomerative hierarchical clustering schemes known as sequential recombination. W…
Deep neural networks (DNNs) have achieved impressive predictive performance due to their ability to learn complex, non-linear relationships between variables. However, the inability to effectively visualize these relationships has led to DNNs being characterized as black boxes and consequently limited their application…
ANN clusters multi-view data by agglomerating subviews and avoiding postprocessing.
Bottom-up algorithms outperform top-down in hierarchical community detection at intermediate levels.
This work improved clustering methods by analyzing various datasets and dendrograms.
CAF-HFCM automatically forms a cluster hierarchy and optimizes the number of clusters without trial-and-validation.
We consider the problem of fast time-series data clustering. Building on previous work modeling the correlation-based Hamiltonian of spin variables we present an updated fast non-expensive Agglomerative Likelihood Clustering algorithm (ALC). The method replaces the optimized genetic algorithm based approach (f-SPC) wit…
A new method for hierarchical clustering using continuous embeddings and optimization.
The use of mutual information as a similarity measure in agglomerative hierarchical clustering (AHC) raises an important issue: some correction needs to be applied for the dimensionality of variables. In this work, we formulate the decision of merging dependent multivariate normal variables in an AHC procedure as a Bay…
Probabilistic embeddings improve speaker diarization accuracy.
As the size of datasets become massive, many commonly-used clustering algorithms (for example, -means or hierarchical agglomerative clustering (HAC) require prohibitive computational cost and memory. In this paper, we propose a solution to these clustering problems by extending threshold clustering (TC) to probl…
We study the problem of fitting an ultrametric distance to a dissimilarity graph in the context of hierarchical cluster analysis. Standard hierarchical clustering methods are specified procedurally, rather than in terms of the cost function to be optimized. We aim to overcome this limitation by presenting a general opt…