Graph neural networks (GNNs) are an emerging model for learning graph embeddings and making predictions on graph structured data. However, robustness of graph neural networks is not yet well-understood. In this work, we focus on node structural identity predictions, where a representative GNN model is able to achieve n…
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48 results for “graph structure noise”
Develops structured noise for more accurate graph classifier robustness certificates.
problem Isotropic noise limits robustness certificates for graph classifiers.
method Randomized smoothing with anisotropic noise distribution.
result Structured-aware robustness certificates provide more accurate predictions.
New method handles structural uncertainty in graphs better than existing models.
problem Handling heterophily and structural noise in semi-supervised learning on graphs.
method Sparse signed message passing network that models a posterior distribution over signed adjacency matrices.
result Our method outperforms strong baseline models on heterophilic benchmarks under both synthetic and real-world structural noise.
Graph attention is not always beneficial; conditions for perfect node classification are identified.
problem Understanding when graph attention mechanisms improve node classification performance.
method Theoretical analysis using Contextual Stochastic Block Models (CSBMs).
result Graph attention mechanisms are more effective when structure noise exceeds feature noise, and simpler graph convolution operations are better when feature noise predominates.
DA-GNN improves robustness of GNNs by modeling noise dependencies.
problem Real-world graph node features often contain noise, leading to performance degradation in GNNs.
method DA-GNN captures noise dependencies using variational inference and new benchmark datasets.
result DA-GNN consistently outperforms existing baselines across various noise scenarios.
PiNGDA learns beneficial noise for graph augmentation stability.
problem Challenges in generating effective and stable graph augmentations.
method PiNGDA uses positive-incentive noise to scientifically analyze and generate beneficial graph augmentations.
result PiNGDA improves GCL performance by learning beneficial noise on graph topology and attributes.
Data Augmentation View on Graph Convolutional Network and the Proposal of Monte Carlo Graph Learningcs.LG
Introduces data augmentation for graph convolutional networks, proposing Monte Carlo Graph Learning.
problem Lack of transparency in graph convolutional networks.
method Data augmentation through graph structure, training traditional classifiers on expanded training set.
result MCGL shows better tolerance to graph structure noise than GCN on noisy graphs.
New algorithm recovers graph structure from noisy data.
problem Noise corrupts structure in Gaussian graphical models, making identification impossible.
method Developed an algorithm to recover graph structure up to an unavoidable ambiguity.
result Algorithm recovers graph structure up to an identified ambiguity, revealing local clustering and connectivity.
Poly-GNNs achieve similar performance regardless of depth, highlighting graph noise's dominance.
problem Performance of poly-GNNs in semi-supervised node classification.
method Analysis of poly-GNNs under a contextual stochastic block model (CSBM).
result For a sufficiently large graph, depth poly-GNNs exhibit the same rate of separation as depth counterparts.
A new graph-based approach for estimating complex data with manifold structure.
problem Regression of large-scale, complex data with underlying geometric structure and noises.
method Constructing a skeleton graph to capture geometric structure, defining metrics, and applying nonparametric regression.
result Statistical guarantees and effectiveness demonstrated through simulations and real data examples.
This paper improves GNN robustness by aligning feature and adjacency matrix learning.
problem Improving robustness of graph neural networks (GNN) in noisy graph data.
method Proposes a novel regularized GSL approach that aligns feature information and graph information, incorporating sparse dimensional reduction.
result Demonstrates superior performance in noisy graph structures compared to competitive baselines.
Graph matching in noisy environments with Markovian errors.
problem Graph matching under time-dependent Markovian noise.
method Introduced edgelighter error model and analyzed graph matching thresholds.
result Graph matching thresholds and mixing times are of order for Erdős-Rényi graphs, and for Stochastic Block Model graphs.
We consider the problem of learning the weighted edges of a graph by observing the noisy times of infection for multiple epidemic cascades on this graph. Past work has considered this problem when the cascade information, i.e., infection times, are known exactly. Though the noisy setting is well motivated by many epide…
Generates low-dimensional node vectors for graphs with privacy while preserving structural preferences.
problem Publishing graph node vectors can leak sensitive individual information.
method SE-PrivGEmb, a skip-gram based technique with a unified noise tolerance mechanism and negative sampling probabilities.
result Our method outperforms existing methods in structural equivalence and link prediction tasks.
Graph matching with feature vectors is solved using a two-layer graph neural network.
problem Graph matching in the presence of sparse binary features.
method Two-layer graph neural network with graph structure.
result Graph neural network can recover correct mapping with high probability under certain conditions.
We study the effect of structural variation in graph data on the predictive performance of graph kernels. To this end, we introduce a novel, noise-robust adaptation of the GraphHopper kernel and validate it on benchmark data, obtaining modestly improved predictive performance on a range of datasets. Next, we investigat…
New methods learn DAGs from noisy data, adapting to noise levels.
problem Inferring causal relationships from observational data with noise and confounding.
method Reformulate DAG learning as a continuous optimization problem over adjacency matrices, jointly inferring structure and noise levels.
result Improved robustness to heteroscedasticity and distribution shifts.
We consider the problem of learning causal directed acyclic graphs from an observational joint distribution. One can use these graphs to predict the outcome of interventional experiments, from which data are often not available. We show that if the observational distribution follows a structural equation model with an …
Proposes ENVAR for causal discovery in structural VAR models with equal noise variance.
problem Challenges in causal discovery from multivariate time series with contemporaneous effects.
method Introduces observational equivalence and the observational alignment discrepancy for structural VAR models with equal noise variance.
result Shows that multiple structural VAR parameterizations can induce the same stationary observed process law.
We consider structural equation models in which variables can be written as a function of their parents and noise terms, which are assumed to be jointly independent. Corresponding to each structural equation model, there is a directed acyclic graph describing the relationships between the variables. In Gaussian structu…
We study the localization of a cluster of activated vertices in a graph, from adaptively designed compressive measurements. We propose a hierarchical partitioning of the graph that groups the activated vertices into few partitions, so that a top-down sensing procedure can identify these partitions, and hence the activa…
BeGIN benchmarks GNNs for instance-dependent label noise in graphs.
problem Instance-dependent label noise in graph data.
method BeGIN introduces a benchmark with various noise types and evaluates noise-handling strategies across GNN architectures.
result Challenges of instance-dependent noise, especially LLM-based corruption, and the importance of node-specific parameterization.
Improved graph-based connectivity estimation using heat modelling.
problem Lack of explicit model-based, dynamic, multivariate, and directed connectivity estimation methods.
method Noise-driven heat modelling on graphs with relaxed assumptions and regularisation.
result Demonstrated ability to capture meaningful spatial structure across real-world datasets.
CASPER improves DAG structure learning by integrating graph structure into score function.
problem Discovering suboptimal DAGs and model vulnerabilities in causal discovery.
method CASPER integrates graph structure into the score function as a new measure in the causal space, enhancing DAG structure learning via adaptive attention to DAG-ness.
result CASPER outperforms state-of-the-art methods in terms of accuracy and robustness.
New method identifies causal graphs with limited data and noise.
problem Identifying causal graphs from observational data is generally impossible.
method Using additional data from two environments with different noise statistics, and assuming Gaussian noise.
result The entire causal graph can be uniquely identified with a constant number of environments.
Integer Programming for Learning Directed Acyclic Graphs from Non-identifiable Gaussian Modelsstat.ME
New method learns DAGs from noisy data without identifiability assumptions.
problem Learning DAGs from non-identifiable Gaussian models with heteroscedastic noise.
method Mixed-integer programming framework for medium-sized problems.
result Asymptotically optimal solution with early stopping criterion.
RECLAIM discovers causal graphs in cyclic, noisy systems.
problem Discovering causal relationships in cyclic, noisy systems.
method RECLAIM uses EM with residual normalizing flows to handle cycles and noise.
result RECLAIM effectively discovers causal graphs in both synthetic and real-world datasets.
Improved graph neural network bounds using graph diffusion matrix.
problem Empirical performance of graph neural networks on real-world graphs.
method Unified model of graph neural networks, focusing on feature diffusion matrix stability.
result Generalization bounds scale with largest singular value of feature diffusion matrix, smaller than prior bounds.
MPNNs struggle with class-bottlenecks and heterophily, leading to performance limitations.
problem Performance limitations of MPNNs under heterophily and structural bottlenecks.
method A statistical framework decomposing model performance into SNR components and proving bounds on sensitivity.
result Optimal graph structures for maximizing higher-order homophily are disjoint unions of single-class and two-class-bipartite clusters.
Graph neural networks have become one of the most important techniques to solve machine learning problems on graph-structured data. Recent work on vertex classification proposed deep and distributed learning models to achieve high performance and scalability. However, we find that the feature vectors of benchmark datas…
Estimates graph process with high-frequency data, proving asymptotic properties.
problem Estimating graph process with high-frequency data.
method Discretized maximum likelihood estimators for GrOU process under high-frequency sampling.
result Asymptotic central limit theorems for estimators under finite and infinite jump activity.
A new clustering algorithm GDT improves on HDBSCAN for uneven data.
problem Data clustering with uneven distribution and high noise.
method GDT combines local and global structures, forming local clusters and estimating a global topological graph based on connectivity between clusters.
result GDT achieves SOTA performance on various datasets with low time complexity.
Large-scale empirical validation of Bayesian Network structure learning algorithms with noisy datacs.LG
This study validates BN structure learning algorithms under noisy data, revealing performance discrepancies.
problem Inconsistent performance claims across BN structure learning algorithms due to inconsistent evaluation methods.
method Applied 15 algorithms to noisy data in multiple studies, evaluating with various criteria.
result Traditional synthetic performance may overestimate real-world performance by 10-50%.
STAG injects noise into graph neural networks to improve performance.
problem Graph neural networks suffer from over-smoothing and limited discrimination.
method Introduces a stochastic aggregation framework (STAG) with adaptive noise injection.
result STAG models correct both over-smoothing and discrimination issues.
New method models aptamer libraries as Boltzmann-weighted graph ensembles for better affinity predictions.
problem Anomalous candidates in SELEX datasets obscure true aptamer-ligand affinity.
method Boltzmann graph ensemble embeddings for thermodynamically parameterized exponential-family random graphs.
result Proposed embedding enables robust community detection and subgraph-level explanations for aptamer ligand affinity.
Optimizes causal effects on unknown graphs using Causal Entropy Optimization.
problem Optimizing causal effects in unknown causal graphs.
method Causal Entropy Optimization (CEO) framework that generalizes Causal Bayesian Optimization (CBO). Incorporates causal structure uncertainty in surrogate models and intervention selection.
result CEO achieves faster convergence to global optimum compared to CBO and improves upon sequential structure learning.
Enhances network intrusion detection in noisy data.
problem Robustness against contaminated and noisy data inputs in network intrusion detection.
method Probabilistic Temporal Graph Network Support Vector Data Description (TGN-SVDD) model.
result Significant improvements in detection performance with synthetic noise.
We address the problem of prediction of multivariate data process using an underlying graph model. We develop a method that learns a sparse partial correlation graph in a tuning-free and computationally efficient manner. Specifically, the graph structure is learned recursively without the need for cross-validation or p…
This study explores how feature graphs enhance GNNs' performance in modeling interactions.
problem Improving GNNs' ability to model feature interactions effectively.
method Investigates feature graphs and their importance in GNNs, using experiments and theoretical support.
result Edges between interacting features are crucial for GNNs, while non-interaction edges can degrade performance.
Graph filtering reduces intra-class noise for improved classification accuracy.
problem Noise in training data affects classifier performance.
method Graph filtering to connect similar samples within a class.
result Asymptotic reduction of intra-class variance while maintaining mean.
Mapper-GIN: Lightweight Structural Graph Abstraction for Corrupted 3D Point Cloud Classificationcs.CV
Mapper-GIN simplifies 3D point cloud classification with lightweight structure.
problem Robust 3D point cloud classification under corruption.
method Mapper algorithm for structural decomposition, GIN for graph classification.
result Mapper-GIN achieves competitive accuracy with minimal parameters.
New spectral clustering method using LASSO regularization for robust graph partitioning.
problem Lack of theoretical guarantees for spectral clustering on general graph models.
method 1-spectral clustering on a new random model with LASSO regularization.
result Effective and robust to small noise perturbations, validated by simulations and real data.
Stable topological summary captures evolving dependency structure in dynamic Bayesian networks.
problem Missing larger-scale patterns in evolving dependency structures in dynamic Bayesian networks.
method Topological approach using Dynamic Bayesian Graphs and persistent homology.
result Stable topological summary (barcodes) captures evolving dependency structure in DBNs.
Graph attention improves node classification by distinguishing important edges.
problem Node classification in graph-based learning models.
method Theoretical analysis of graph attention networks for node classification.
result Graph attention can perfectly classify nodes in an 'easy' regime but fails in a 'hard' regime.
Dropout-based regularization methods can be regarded as injecting random noise with pre-defined magnitude to different parts of the neural network during training. It was recently shown that Bayesian dropout procedure not only improves generalization but also leads to extremely sparse neural architectures by automatica…
Paper proves convergence of bi-stochastically normalized graph Laplacian to manifold Laplacian and robustness to outlier noise.
problem Convergence of bi-stochastically normalized graph Laplacian to manifold Laplacian and robustness to outlier noise.
method Proves convergence of bi-stochastically normalized graph Laplacian to manifold Laplacian with rates, and proposes an approximate and constrained matrix scaling problem to achieve the same consistency rate.
result Graph Laplacian consistency rate matches the rate for clean manifold data plus an additional term proportional to the boundedness of the inner-products of the noise vectors.
Discrete noise improves graph generation quality and speed.
problem Generating high-quality discrete graph samples.
method Using discrete noise in diffusion models for graph generation.
result Discrete noise leads to 1.5x better MMDs and 30x faster sampling.
Adversarial contamination of networks in the setting of vertex nomination: a new trimming methodstat.ML
New method trims network data to resist adversarial contamination.
problem Adversarial contamination in network data affects statistical and algorithmic performance.
method Proposes a new trimming method operating in model space to address both block and white noise contamination.
result Demonstrates superior performance in simulations compared to direct trimming.