We introduce GSimCNN (Graph Similarity Computation via Convolutional Neural Networks) for predicting the similarity score between two graphs. As the core operation of graph similarity search, pairwise graph similarity computation is a challenging problem due to the NP-hard nature of computing many graph distance/simila…
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48 results for “graph similarity”
PSimGNN partitions graphs into subgraphs for efficient graph similarity computation.
problem Efficiently compute graph similarity scores for large graphs.
method Graph partitioning followed by subgraph-level and node-level comparisons using a graph neural network.
result PSimGNN outperforms state-of-the-art methods in graph similarity computation tasks.
CoSimGNN improves graph similarity computation for large graphs.
problem Efficiently computing graph similarity scores for large graphs.
method Embedding-coarsening-matching framework with adaptive pooling and fine-grained interactions.
result CoSimGNN achieves best performance in graph similarity computation.
Learning-based Efficient Graph Similarity Computation via Multi-Scale Convolutional Set Matchingcs.LG
Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs is typically NP-hard, a series of approximate methods have been proposed with a t…
Graph neural networks improve with edge similarity constraints in RNA structure analysis.
problem Lack of edge similarity constraints in graph neural networks.
method Introduced a graph neural network layer that leverages prior information about edge similarities.
result Edge similarity constraints do not enhance performance in graph neural networks.
Graph similarity search is among the most important graph-based applications, e.g. finding the chemical compounds that are most similar to a query compound. Graph similarity computation, such as Graph Edit Distance (GED) and Maximum Common Subgraph (MCS), is the core operation of graph similarity search and many other …
Proposes MGMN for end-to-end graph similarity learning.
problem Lack of cross-level interactions in graph similarity learning.
method Multi-level graph matching network (MGMN) combining node-graph matching and siamese graph neural networks.
result MGMN outperforms state-of-the-art models on graph-graph classification and regression tasks.
funcGNN uses graph neural networks to estimate program similarity efficiently.
problem Estimating accurate program similarity for software engineering tasks.
method funcGNN trains on labeled CFG pairs to predict GED between unseen programs using effective embedding vectors.
result funcGNN achieves lower error rate (0.00194) and is 23 times faster than traditional methods.
In this paper, we propose a family of graph partition similarity measures that take the topology of the graph into account. These graph-aware measures are alternatives to using set partition similarity measures that are not specifically designed for graph partitions. The two types of measures, graph-aware and set parti…
In many domains where data are represented as graphs, learning a similarity metric among graphs is considered a key problem, which can further facilitate various learning tasks, such as classification, clustering, and similarity search. Recently, there has been an increasing interest in deep graph similarity learning, …
Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the incorporation of nonlinearity. However, most existing kernel-based graph learning mechanism…
Graph kernels assess graph similarity for various applications.
problem Assessing similarity between graphs for predictions.
method Review and comparison of existing graph kernels.
result State-of-the-art graph kernels reviewed and compared.
Similarity graphs are an active research direction for the nearest neighbor search (NNS) problem. New algorithms for similarity graph construction are continuously being proposed and analyzed by both theoreticians and practitioners. However, existing construction algorithms are mostly based on heuristics and do not exp…
This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various supervised prediction problems defined on structured data, can be trained to pr…
The problem of unsupervised learning node embeddings in graphs is one of the important directions in modern network science. In this work we propose a novel framework, which is aimed to find embeddings by \textit{discriminating distributions of similarities (DDoS)} between nodes in the graph. The general idea is implem…
Ethereum Fraud Detection via Joint Transaction Language Model and Graph Representation Learningcs.CR
TLMG4Eth combines language and graph models for Ethereum fraud detection.
problem Current fraud detection methods fail to consider semantic and similarity patterns in Ethereum transactions.
method TLMG4Eth uses a transaction language model and graph-based methods to capture semantic, similarity, and structural features.
result TLMG4Eth detects anomalies in Ethereum transactions more effectively than existing methods.
Extends graph similarity theory to improve MPNNs' generalization abilities.
problem Understanding MPNNs' generalization beyond training data.
method Extends graph similarity theory, assesses graph structure, aggregation, and loss functions.
result Improves understanding of MPNNs' generalization properties.
Graph network predicts circRNA-disease associations using multi-source similarity features.
problem Identifying circRNA-disease associations is challenging and time-consuming.
method Proposes a graph convolution network framework using multi-source similarity information.
result Framework predicts circRNA-disease associations with promising results and outperforms existing methods.
Proposes SimPool for graph pooling using structural similarity features.
problem Challenges in graph pooling due to lack of spatial locality.
method Integrates structural similarity features with a revised pooling layer to propose SimPool.
result SimPool produces node cluster assignments resembling CNN's locality preserving pooling.
End-to-end graph-based SSL learns all graph factors dynamically.
problem Learning quality of graph in SSL is crucial but difficult.
method Proposes an end-to-end approach to optimize all graph factors.
result Demonstrates effectiveness on benchmark datasets.
Tree++ graph kernel captures similarities at multiple granularities.
problem Lack of scale-adaptivity in existing graph kernels.
method Tree++ uses truncated BFS trees and super paths to represent graphs at different granularities.
result Tree++ achieves best classification accuracy on real-world graphs.
Recently similarity graphs became the leading paradigm for efficient nearest neighbor search, outperforming traditional tree-based and LSH-based methods. Similarity graphs perform the search via greedy routing: a query traverses the graph and in each vertex moves to the adjacent vertex that is the closest to this query…
Classifies solitons for surface diffusion flow of graphs.
problem Classifying solitons for surface diffusion flow of graphs.
method Classifies solitons including equilibria, self-similar solutions, and travelling waves.
result Classified solitons for surface diffusion flow of entire graphs.
Recently, graph neural networks have been adopted in a wide variety of applications ranging from relational representations to modeling irregular data domains such as point clouds and social graphs. However, the space of graph neural network architectures remains highly fragmented impeding the development of optimized …
Enhances graph neural networks by considering feature similarities in node aggregation.
problem Ignoring node feature similarities in traditional graph aggregation schemes.
method Interprets node aggregation as kernel weighting, proposing a framework that considers feature similarities.
result Proposed framework outperforms traditional GCNs in real-world applications.
Graph change-point detection method learns graph similarity from data.
problem Detect abrupt changes in dynamic networks.
method Siamese graph neural network for graph similarity learning.
result Method detects changes in diverse types of networks with minimal data history.
Investigation of the market graph attracts a growing attention in market network analysis. One of the important problem connected with market graph is to identify it from observations. Traditional way for the market graph identification is to use a simple procedure based on statistical estimations of Pearson correlatio…
Graph Embedding with Shifted Inner Product Similarity and Its Improved Approximation Capabilitystat.ML
We propose shifted inner-product similarity (SIPS), which is a novel yet very simple extension of the ordinary inner-product similarity (IPS) for neural-network based graph embedding (GE). In contrast to IPS, that is limited to approximating positive-definite (PD) similarities, SIPS goes beyond the limitation by introd…
GNNs may be limited by graph topology, affecting their learning outcomes.
problem Understanding how graph topology influences GNN behavior and performance.
method Investigating the interaction between local topological features and GNN message-passing schemes.
result Locally similar neighborhoods can lead to consistent node representations, affecting GNN performance.
Neural network for subgraph similarity computation with pruning.
problem Computing subgraph similarity between a target and query graph.
method Convert pruning to node relabeling, relax to differentiable problem, design neural network for SED computation.
result Establishes new state-of-the-art results across multiple benchmark datasets.
We propose a novel model for generating graphs similar to a given example graph. Unlike standard approaches that compute features of graphs in Euclidean space, our approach obtains features on a surface of a hypersphere. We then utilize a von Mises-Fisher distribution, an exponential family distribution on the surface …
Finding a new mathematical representations for graph, which allows direct comparison between different graph structures, is an open-ended research direction. Having such a representation is the first prerequisite for a variety of machine learning algorithms like classification, clustering, etc., over graph datasets. In…
Study properties of self-similar continua with finite intersection property.
problem Characterize self-similar continua with finite intersection property.
method Prove intersection graph criterion, finite order theorem, and parameter matching theorem.
result All Jordan arcs starting from a intersection point in such continuum on a plane should have the same slope parameter at that point.
FREDE efficiently embeds graphs using linear space and guarantees quality.
problem Efficiently embedding graphs with quality guarantees and linear space complexity.
method FREDE combines matrix sketching with a nonlinear transform of PageRank similarities to achieve linear space and quality guarantees.
result FREDE provides column-covariance approximation guarantees that are nearly as good as SVD, even with limited node similarities.
A new graph kernel uses LCS and Wasserstein distance for better graph comparisons.
problem Graph learning methods can be limited by information from distant vertices and path length constraints.
method Proposes a Graph Kernel based on LCS similarity and Wasserstein distance in a novel metric space.
result The new kernel emphasizes comparisons between similar paths and reduces information loss.
We propose a new method to model multi-way similarities into hypergraphs for clustering.
problem Clustering real-valued data using hypergraphs with multi-way similarities.
method Formulate multi-way similarities using kernel functions, establish connections to hypergraph cut, and develop a fast spectral clustering algorithm.
result Our method outperforms existing graph and heuristic modeling methods in clustering performance.
Efficiently infers graph edges from genetic similarity data in landscape genetics.
problem Inferring unknown graph edges from genetic similarity data in a heterogeneous landscape.
method Developed an efficient first-order optimization method to solve the inverse landscape genetics problem.
result Our method provides fast and reliable convergence, significantly outperforming existing heuristics.
We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit distance for Reeb graphs and prove that it is stable and universal, meaning that it pr…
This review introduces graph kernels for chemoinformatics.
problem Quantifying similarity between molecular graphs.
method Graph kernels as a method for quantifying molecular graph similarity.
result Graph kernels have direct applications in chemoinformatics.
In this paper we provide a principled approach to solve a transductive classification problem involving a similar graph (edges tend to connect nodes with same labels) and a dissimilar graph (edges tend to connect nodes with opposing labels). Most of the existing methods, e.g., Information Regularization (IR), Weighted …
The paper examines how well node similarities are preserved by random projections in graph embeddings.
problem The preservation of node similarities under random projections in graph embeddings.
method Investigation of dot product and cosine similarity preservation by random projections over graph matrix rows.
result Random projections produce unreliable embeddings for dot product, especially for high-degree nodes.
A new kernel measures brain network similarities, improving disease classification.
problem Lack of edge weight information in existing graph kernels for brain connectivity networks.
method Ordinal pattern kernel for weighted brain connectivity networks.
result The ordinal pattern kernel achieves better classification performance than state-of-the-art graph kernels.
Using different methods for laying out a graph can lead to very different visual appearances, with which the viewer perceives different information. Selecting a "good" layout method is thus important for visualizing a graph. The selection can be highly subjective and dependent on the given task. A common approach to se…
A new method identifies similar mutual funds using graph learning.
problem Identifying similar mutual funds with nuanced portfolio similarities.
method Node2Vec machine learning method applied to a weighted bipartite network of funds and assets.
result Identifies structural similarity among mutual funds' portfolios.
Improves document summarization by combining word embeddings and n-grams.
problem Exact word matching fails to measure semantic similarity between sentences.
method Uses deep embedding features and tf-idf features to improve sentence similarity measure; builds an improved sentence similarity graph; employs a submodular objective function; develops a Transformer-based compression model.
result Outperforms tf-idf based approach and achieves state-of-the-art performance on DUC04 dataset.
Can one reduce the size of a graph without significantly altering its basic properties? The graph reduction problem is hereby approached from the perspective of restricted spectral approximation, a modification of the spectral similarity measure used for graph sparsification. This choice is motivated by the observation…
Study shows how leveraging hierarchical similarity graphs improves matrix completion in recommender systems.
problem Improving matrix completion in recommender systems using hierarchical similarity graphs.
method Characterizes the optimal sample complexity using hierarchical stochastic block models and low-rank rating matrices.
result Exploiting hierarchical structure of social graphs significantly reduces the number of observed entries needed for accurate matrix completion.
Consistent spectral clustering with fairness constraints on representation graphs.
problem Finding balanced clusters in similarity graphs with fairness constraints.
method Developed variants of unnormalized and normalized spectral clustering for fair planted partitions.
result Consistency results for constrained spectral clustering under fair planted partitions.