Customized-GNN generates model-specific for each graph.
problem Graphs in the same dataset have distinct structures.
method Proposes Customized-GNN framework to generate model-specific for each graph.
result Demonstrates effectiveness on various graph classification benchmarks.
New method uses graph generative models for graph classification.
problem Graph classification for non-relational i.i.d. data.
method Derive classification formulas from GGM, train generative graph auto-encoder model.
result New conditional ELBO for training graph auto-encoder model.
Graphs can be fooled by small edge changes, but this work protects them.
problem Adversaries can manipulate graph data to mislead graph classification models.
method We introduce a smoothed graph classification model with a robustness guarantee.
result The smoothed model maintains consistent predictions under small adversarial perturbations.
Combines curvature descriptors with TDA for graph model evaluation.
problem Evaluating graph generative models efficiently and accurately.
method Combines graph curvature descriptors with topological data analysis.
result Robust, expressive descriptors for graph generative models.
Bayesian graph learning improves graph representation accuracy.
problem Inaccurate graph construction from noisy data.
method Non-parametric Bayesian graph model for posterior inference of graph adjacency matrices.
result Model scales well to large graphs and improves node classification, link prediction, and recommendation tasks.
SHADOWCAST generates graphs with user-specified attributes.
problem Controlling graph generation with understandable structures.
method Conditional generative adversarial network guided by Markov model.
result Competitive performance in generating desired graphs.
Assessing generative models is not an easy task. Generative models should synthesize graphs which are not replicates of real networks but show topological features similar to real graphs. We introduce an approach for assessing graph generative models using graph classifiers. The inability of an established graph classi…
A new method learns graph distributions invariant to node ordering.
problem Graphs are hard to model due to node ordering invariance issues.
method Score-based generative modeling with permutation equivariant graph neural network.
result The method achieves better or comparable graph generation results.
We improve a graph generation model to accurately recover Barabási-Albert graph parameters.
problem Recover Barabási-Albert graph parameters from graph data.
method Use a disentanglement-focused deep autoencoding framework with a sequential LSTM decoder trained on graph data.
result Successfully recover Barabási-Albert graph parameters.
New graph types help identify complex relationships.
problem Understanding complex relationships in data.
method Introducing separable and essentially separable graphs to characterize and identify graphical models.
result Developed algorithms to identify equivalence classes of essentially separable graphs.
Survey on deep models for graph generation.
problem Improving fidelity of generated graphs.
method Taxonomy and comparison of deep generative models.
result Advances in deep generative models for graph generation.
We introduce graph normalizing flows: a new, reversible graph neural network model for prediction and generation. On supervised tasks, graph normalizing flows perform similarly to message passing neural networks, but at a significantly reduced memory footprint, allowing them to scale to larger graphs. In the unsupervis…
In this paper, we unify the Markov theory of a variety of different types of graphs used in graphical Markov models by introducing the class of loopless mixed graphs, and show that all independence models induced by m-separation on such graphs are compositional graphoids. We focus in particular on the subclass of rib…
SIGMA model improves graph matching across various applications.
problem Graph matching problem in different domains.
method Stochastic Iterative Graph Matching (SIGMA) model with multi-step refinement and dummy nodes.
result SIGMA produces significantly improved graph matching results compared to state-of-the-art models.
With the great success of graph embedding model on both academic and industry area, the robustness of graph embedding against adversarial attack inevitably becomes a central problem in graph learning domain. Regardless of the fruitful progress, most of the current works perform the attack in a white-box fashion: they n…
SLIM model tackles graph classification by resolving part-interaction dilemmas.
problem Difficulty in modeling graph parts and their interactions in graph classification.
method SLIM model, which solves resolution dilemmas and leverages explicit interactions.
result SLIM offers improved interpretability, accuracy, and new insights in graph representation learning.
New model generates graphs with tighter likelihood bounds and better quality.
problem Intractable likelihood of autoregressive graph models.
method Derive exact joint probability, approximate node orderings, variational inference.
result Lower bound on log-likelihood is significantly tighter than previous methods.
TGR rewires temporal graphs to improve TGNN performance.
problem Temporal graphs in evolving networks can suffer from under-reaching and over-squashing issues.
method TGR uses expander graph propagation to create message-passing highways between temporally distant nodes.
result TGR achieves state-of-the-art results on temporal graph benchmarks.
Generative models of graph structure have applications in biology and social sciences. The state of the art is GraphRNN, which decomposes the graph generation process into a series of sequential steps. While effective for modest sizes, it loses its permutation invariance for larger graphs. Instead, we present a permuta…
MoFlow generates chemically valid molecular graphs from latent representations.
problem Generating chemically valid molecular graphs from latent representations is challenging.
method MoFlow uses a flow-based approach with Glow for bond generation and a novel graph conditional flow for atom generation, ensuring chemical validity and efficiency.
result MoFlow achieves state-of-the-art performance in molecular graph generation and optimization.
Graph Beta Diffusion (GBD) generates graphs with mixed discrete and continuous components.
problem Generating graphs with mixed discrete and continuous components.
method Introduces Graph Beta Diffusion (GBD) using a beta diffusion process.
result Competes strongly with existing models across graph benchmarks.
Enhances graph classification models on small datasets.
problem Over-fitting and undergeneralization on small-scale benchmark datasets.
method Data augmentation via graph structure transformation and model evolution framework.
result Average improvement of 3 - 13% accuracy on graph classification tasks.
Graph Neural Networks struggle on random graphs without node identifiers.
problem Graph Neural Networks' limitations on random graphs without node identifiers.
method Study of Graph Neural Networks and Structural Graph Neural Networks convergence on large random graphs.
result Structural Graph Neural Networks are more powerful and universal than Graph Neural Networks on random graphs.
Improved graph generation model for small organic molecules.
problem Graph generation models struggle with matching training distributions and require expensive graph matching.
method Introduced a message passing neural network into the GVAE's encoder and decoder.
result Demonstrated improved graph generation for small organic molecules.
G5 universal GRAPH-BERT learns graph representations across different datasets.
problem Learning graph representations across diverse graph datasets with distinct input and output configurations.
method G5 introduces a pluggable model architecture with input and output components for each graph data source, connected via a unified layer and fusion layer.
result G5 removes obstacles for cross-graph representation learning and transfer, even for sparse data.
Unified framework models graph data as a mixture of graphons using graph moments.
problem Graph datasets often mix from multiple underlying distributions.
method Model graph data as a mixture of graphons, using graph moments to cluster graphs.
result Graphs from similar graphons exhibit similar motif densities, enabling principled estimation of graphon mixture components.
New method uses contrastively trained GNNs for more reliable graph model evaluation.
problem Need effective methods to evaluate Graph Generative Models.
method Use representations from contrastively trained Graph Neural Networks (GNNs) for evaluation.
result Contrastively trained GNNs provide more reliable evaluation metrics than traditional or GNN-based approaches.
A new GNM model outperforms MLP for tabular data.
problem Learning with tabular data.
method Proposes Graph Neural Machine (GNM) replacing MLP's graph representation with a nearly complete graph and using synchronous message passing.
result GNM outperforms MLP in classification and regression tasks.
Propagation-regularization improves GNN performance by infusing extra graph information.
problem The effectiveness of graph Laplacian regularization in GNNs is questioned and improved upon.
method Introducing Propagation-regularization (P-reg) to enhance GNN performance.
result P-reg boosts GNN performance on various tasks across multiple datasets.
Generative model for creating graphs with new communities.
problem Generating graphs with a new community structure.
method Fit Gaussian mixture model to latent space data and add new clusters based on MDL principle.
result Empirically demonstrated effectiveness of GCA for generating graphs with new community structures.
We introduce block-tree graphs as a framework for deriving efficient algorithms on graphical models. We define block-tree graphs as a tree-structured graph where each node is a cluster of nodes such that the clusters in the graph are disjoint. This differs from junction-trees, where two clusters connected by an edge al…
This paper introduces a novel graph signal processing framework for building graph-based models from classes of filtered signals. In our framework, graph-based modeling is formulated as a graph system identification problem, where the goal is to learn a weighted graph (a graph Laplacian matrix) and a graph-based filter…
EvoNet predicts the evolution of dynamic graphs using a graph neural network and recurrent architecture.
problem Predicting the evolution of dynamic graphs is challenging and underexplored.
method EvoNet uses a graph neural network and recurrent architecture to predict the evolution of dynamic graphs.
result EvoNet effectively predicts the evolution of dynamic graphs on both artificial and real-world datasets.
GCNs distinguish graph models based on embeddings, but depth matters.
problem GCNs distinguish between different random graph models.
method Investigated the power of GCNs of varying depths to distinguish between graph models.
result GCNs with logarithmic depth can distinguish certain graphons, but simpler architectures suffice for others.
This study explores how feature graphs enhance GNNs' performance in modeling interactions.
problem Improving GNNs' ability to model feature interactions effectively.
method Investigates feature graphs and their importance in GNNs, using experiments and theoretical support.
result Edges between interacting features are crucial for GNNs, while non-interaction edges can degrade performance.
XGNN explains graph neural networks by generating graphs that maximize model predictions.
problem Lack of explainable models for graph neural networks.
method Train a graph generator to maximize model predictions, using reinforcement learning and graph rules.
result Generated graphs provide insights into how GNNs work and can guide model improvement.
Auto-decoder synthesizes graphs from latent codes.
problem Creating new graph structures from specified distributions.
method Generative model learns latent codes from empirical distribution. Self-attention identifies likely connectivity patterns. Graph-based normalizing flows sample latent codes.
result Model outperforms state of the art by 1.5x in accuracy and 2x in speed.
A new model for graph sampling that preserves structure without explicit targeting.
problem Graphs are often not fully representative of true relationships, leading to biased machine learning models.
method Node copying model: randomly replaces each node's neighbors with those of a randomly sampled similar node.
result The model achieves higher accuracy in node classification and mitigates adversarial attacks.
Graphs are essential representations of many real-world data such as social networks. Recent years have witnessed the increasing efforts made to extend the neural network models to graph-structured data. These methods, which are usually known as the graph neural networks, have been applied to advance many graphs relate…
Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful new approach for learning generative models over graphs, which can capture both …
A fast graph embedding method for large graphs.
problem Efficiently embedding large graphs for various applications.
method One-hot graph encoder embedding with linear complexity.
result Graph encoder embedding is approximately normally distributed and converges to its mean.
Edge features contain important information about graphs. However, current state-of-the-art neural network models designed for graph learning, e.g. graph convolutional networks (GCN) and graph attention networks (GAT), adequately utilize edge features, especially multi-dimensional edge features. In this paper, we build…
We introduce GSimCNN (Graph Similarity Computation via Convolutional Neural Networks) for predicting the similarity score between two graphs. As the core operation of graph similarity search, pairwise graph similarity computation is a challenging problem due to the NP-hard nature of computing many graph distance/simila…
Proposes a new model for traffic flow on directed graphs.
problem Modeling advection on directed graphs for traffic flow.
method Reformulates graph advection operator as finite difference scheme; proposes DGAMGP model.
result Effective modeling of traffic flow and uncertainty as an advective process.
This paper proposes a new Quantum Spatial Graph Convolutional Neural Network (QSGCNN) model that can directly learn a classification function for graphs of arbitrary sizes. Unlike state-of-the-art Graph Convolutional Neural Network (GCNN) models, the proposed QSGCNN model incorporates the process of identifying transit…
Lots of learning tasks require dealing with graph data which contains rich relation information among elements. Modeling physics systems, learning molecular fingerprints, predicting protein interface, and classifying diseases demand a model to learn from graph inputs. In other domains such as learning from non-structur…
AutoGraph uses transformers to efficiently generate graphs as sequences.
problem Efficiently generating large, sparse graphs without expensive node features.
method Flattening graphs into sequences and using decoder-only transformers.
result AutoGraph achieves state-of-the-art performance on synthetic and molecular benchmarks.
Semi-implicit graph variational auto-encoder (SIG-VAE) is proposed to expand the flexibility of variational graph auto-encoders (VGAE) to model graph data. SIG-VAE employs a hierarchical variational framework to enable neighboring node sharing for better generative modeling of graph dependency structure, together with …