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arXiv research

A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

168,657 papers · 148 categories

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164327491654 · Jun 202019922001200920172026
48 results for functional MRI

Machine learning for ASD diagnosis using morphological MRI networks.

problem Challenging to diagnose ASD using MRI due to heterogeneity and incomplete network neuroscience.
method Crowdsourced Kaggle competition to develop and benchmark ML pipelines.
result First-ranked team achieved 70% accuracy, 72.5% sensitivity, and 67.5% specificity.

Generative adversarial networks reconstruct MRI images without full data.

problem Lack of fully-sampled ground truth data for supervised MRI reconstruction.
method Generative adversarial networks for unsupervised MRI reconstruction.
result Reconstructed images show more anatomical structure than conventional methods.

New MRI method maps tissue parameters more accurately by ignoring voxel independence.

problem Voxel independence assumption limits model fitting reliability and repeatability.
method Self-supervised deep variational approach with Gaussian mixture prior.
result Our method outperforms current techniques in dMRI simulations and real data.

StaPLR improves Alzheimer's disease classification by identifying important MRI scan types and measures.

problem Classifying Alzheimer's disease using multi-source MRI data.
method Stacked penalized logistic regression (StaPLR) with hierarchical multi-view structure and new view importance measure.
result StaPLR identifies the most important MRI scan types and measures for Alzheimer's disease classification.

The paper characterizes brain states and transitions using functional MRI data.

problem Characterizing the dynamic reconfiguration of neural systems in brain states.
method Bayesian model-based characterization of latent brain states and posterior predictive discrepancy using the latent block model.
result The model detects transitions between latent brain states and identifies distinctive community patterns in task-fMRI data.

GNNs improve brain activity forecasting in fMRI studies.

problem Understanding neural dynamics in the brain.
method Comparison of GNN architectures for modeling fMRI data.
result GNNs outperform VAR models in robustly scaling to large network studies.

Improves MRI-based brain surface reconstruction with minimal deformation energy loss.

problem Ensuring optimal deformation energy and consistency in learning-based cortical surface reconstruction.
method Design and implementation of a Minimal Energy Deformation (MED) loss in the V2C-Flow model.
result Significant improvements in training consistency and reproducibility without sacrificing reconstruction accuracy and topological correctness.

Paper introduces a nonparametric functional graphical model for random functions.

problem Estimating probabilistic conditional independence in functional graphical models.
method Functional sufficient dimension reduction to relax Gaussian or copula Gaussian assumptions.
result Enhances estimation accuracy and retains probabilistic conditional independence.

CSGM framework applied to clinical MRI data for robust reconstructions.

problem Applying deep generative priors to clinical MRI data for high-quality reconstructions.
method Training a generative prior on brain scans from the fastMRI dataset and using Langevin dynamics for posterior sampling.
result Posterior sampling via Langevin dynamics achieves high quality reconstructions in clinical MRI data.

Deep Learning is a promising approach to either automate or simplify several tasks in the healthcare domain. In this work, we introduce SegAN-CAT, an approach to brain tumor segmentation in Magnetic Resonance Images (MRI), based on Adversarial Networks. In particular, we extend SegAN, successfully applied to the same t…

2019-10-07abs ↗pdf ↗

This study improves lung tumor segmentation in mice MRI scans with nnU-Net, reducing annotation needs.

problem Accurate lung tumor segmentation in mice MRI scans for drug discovery.
method Optimized nnU-Net 3D model for lung tumor segmentation with minimal annotations.
result nnU-Net 3D models outperform 2D models in MRI mice scans, requiring fewer annotations.

In compressed sensing MRI (CS-MRI), k-space measurements are under-sampled to achieve accelerated scan times. CS-MRI presents two fundamental problems: (1) where to sample and (2) how to reconstruct an under-sampled scan. In this paper, we tackle both problems simultaneously for the specific case of 2D Cartesian sampli…

2019-07-26abs ↗pdf ↗

Accelerating Magnetic Resonance Imaging (MRI) by taking fewer measurements has the potential to reduce medical costs, minimize stress to patients and make MRI possible in applications where it is currently prohibitively slow or expensive. We introduce the fastMRI dataset, a large-scale collection of both raw MR measure…

2018-11-21abs ↗pdf ↗

New method MRI improves machine learning models' ability to generalize to unseen data.

problem Machine learning models often fail to generalize well to out-of-distribution data.
method Introduces a new notion of invariance (MRI) and a practical version (MRI-v1) to improve model generalization.
result MRI-v1 guarantees invariant predictors and outperforms IRM-v1 in various settings.

Veterans with mild traumatic brain injury (mTBI) have reported auditory and visual dysfunction that persists beyond the acute incident. The etiology behind these symptoms is difficult to characterize with current clinical imaging. These functional deficits may be caused by shear injury or micro-bleeds, which can be det…

2019-12-06abs ↗pdf ↗

The clinical management of several cardiovascular conditions, such as pulmonary hypertension, require the assessment of the right ventricular (RV) function. This work addresses the fully automatic and robust access to one of the key RV biomarkers, its ejection fraction, from the gold standard imaging modality, MRI. The…

2018-09-27abs ↗pdf ↗

A central question for active learning (AL) is: "what is the optimal selection?" Defining optimality by classifier loss produces a new characterisation of optimal AL behaviour, by treating expected loss reduction as a statistical target for estimation. This target forms the basis of model retraining improvement (MRI), …

2015-02-05abs ↗pdf ↗

Deep model integrates MRI and DTI for autism severity prediction.

problem Predicting spectrum-level deficits in autism using multimodal brain imaging.
method Generative deep-learning framework combining rs-fMRI and DTI data.
result Hybrid model outperforms existing methods in predicting autism severity.

Improved detection of brain tumours in MRIs using latent space dissimilarities.

problem Detecting tumours in brain MRIs using unsupervised learning.
method Slice-wise semi-supervised method based on dissimilarity between latent representations of images and their reconstructions.
result Improved detection results with higher resolution images and better reconstructions.

Use expert visualization or conventional clinical indices can lack accuracy for borderline classications. Advanced statistical approaches based on eigen-decomposition have been mostly concerned with shape and motion indices. In this paper, we present a new approach to identify CVDs from cine-MRI by estimating large poo…

2019-09-25abs ↗pdf ↗

Paper extends 2D ZSAD to 3D MRI without training, achieving robust anomaly detection.

problem Challenges in extending zero-shot anomaly detection to 3D medical images.
method Constructs localized volumetric tokens by aggregating 2D slices processed by 2D foundation models.
result Training-free, batch-based ZSAD effectively extends from 2D encoders to full 3D MRI volumes.

A method for MRI brain tumor segmentation using feature vectors and kernel dictionary learning.

problem Segmenting brain tumor regions in MRI images.
method Extracting feature vectors, training kernel dictionaries, and selecting informative feature vectors.
result The method outperforms other methods in segmentation accuracy and reduces training time.

A deep learning framework segments deep cerebellar nuclei from 7T MRI, improving accuracy and consistency.

problem Challenging to accurately segment small deep cerebellar nuclei using standard MRI protocols.
method Proposes DCN-Net, a deep learning framework that encodes contextual information and handles imbalanced data.
result Improves segmentation accuracy and consistency compared to existing methods.

This study benchmarks algorithms for automatic segmentation of LGE-MRI images of the left atrium.

problem Challenging segmentation of LGE-MRI images due to low contrast.
method Organized a large-scale benchmarking challenge with 154 3D LGE-MRIs and 27 teams.
result Top method achieved 93.2% dice score and 0.7 mm mean surface to surface distance.

Enhances deep neural networks for MRI reconstruction by increasing expressivity.

problem Balancing network complexity and performance in deep learning MRI reconstruction.
method Geometric approach using bootstrapping and subnetwork aggregation with attention module.
result Significant improvement in MRI reconstruction performance with minimal complexity increase.

InVA models image outcomes from multiple modalities, outperforming standard VAEs.

problem Understanding relationships across multiple imaging modalities in neuroimaging.
method Integrative Variational Autoencoder (InVA) framework for image-on-image regression.
result InVA accurately predicts PET scans from structural MRI, outperforming conventional models.

In this work we propose an adversarial learning approach to generate high resolution MRI scans from low resolution images. The architecture, based on the SRGAN model, adopts 3D convolutions to exploit volumetric information. For the discriminator, the adversarial loss uses least squares in order to stabilize the traini…

2018-12-29abs ↗pdf ↗