A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.
Enhanced mortality prediction model using EHR and free-text data.
Paper uses NLP to cluster patient visits for diagnosis validation.
Health professionals can use natural language processing (NLP) technologies when reviewing electronic health records (EHR). Machine learning free-text classifiers can help them identify problems and make critical decisions. We aim to develop deep learning neural network algorithms that identify EHR progress notes perta…
LLMs' explanations are often insufficient and vary with input distribution.
An unsupervised method clusters patient incident reports for content analysis.
Extracting actionable insight from Electronic Health Records (EHRs) poses several challenges for traditional machine learning approaches. Patients are often missing data relative to each other; the data comes in a variety of modalities, such as multivariate time series, free text, and categorical demographic informatio…
Interventional cancer clinical trials are generally too restrictive, and some patients are often excluded on the basis of comorbidity, past or concomitant treatments, or the fact that they are over a certain age. The efficacy and safety of new treatments for patients with these characteristics are, therefore, not defin…
Recent work in learning ontologies (hierarchical and partially-ordered structures) has leveraged the intrinsic geometry of spaces of learned representations to make predictions that automatically obey complex structural constraints. We explore two extensions of one such model, the order-embedding model for hierarchical…
We propose JECL, a method for clustering image-caption pairs by training parallel encoders with regularized clustering and alignment objectives, simultaneously learning both representations and cluster assignments. These image-caption pairs arise frequently in high-value applications where structured training data is e…
Many methods have been proposed for detecting emerging events in text streams using topic modeling. However, these methods have shortcomings that make them unsuitable for rapid detection of locally emerging events on massive text streams. We describe Spatially Compact Semantic Scan (SCSS) that has been developed specif…
We present a novel event embedding algorithm for crime data that can jointly capture time, location, and the complex free-text component of each event. The embedding is achieved by regularized Restricted Boltzmann Machines (RBMs), and we introduce a new way to regularize by imposing a penalty on the conditiona…
This study shows unstructured clinical notes can improve mortality prediction.
Crimes emerge out of complex interactions of human behaviors and situations. Linkages between crime incidents are highly complex. Detecting crime linkage given a set of incidents is a highly challenging task since we only have limited information, including text descriptions, incident times, and locations. In practice,…
Algorithm detects surgical site infections from hospital data.
Recent work has demonstrated that embeddings of tree-like graphs in hyperbolic space surpass their Euclidean counterparts in performance by a large margin. Inspired by these results and scale-free structure in the word co-occurrence graph, we present an algorithm for learning word embeddings in hyperbolic space from fr…
Deep learning predicts readmissions from less structured data.
Early detection of preventable diseases is important for better disease management, improved inter-ventions, and more efficient health-care resource allocation. Various machine learning approacheshave been developed to utilize information in Electronic Health Record (EHR) for this task. Majorityof previous attempts, ho…
Motivated by the need to automate medical information extraction from free-text radiological reports, we present a bi-directional long short-term memory (BiLSTM) neural network architecture for modelling radiological language. The model has been used to address two NLP tasks: medical named-entity recognition (NER) and …
Deep learning predicts ICU mortality with enhanced interpretability.
Representation learning improves EHR data for healthcare tasks.
Many radiological studies can reveal the presence of several co-existing abnormalities, each one represented by a distinct visual pattern. In this article we address the problem of learning a distance metric for plain radiographs that captures a notion of "radiological similarity": two chest radiographs are considered …
De-identification of electronic health records (EHR) is a vital step towards advancing health informatics research and maximising the use of available data. It is a two-step process where step one is the identification of protected health information (PHI), and step two is replacing such PHI with surrogates. Despite th…
LLMs outperform strong tabular baselines on industrial car retrofit prediction.
Method augments CTNs for ICD coding with neural network imputation.
Paper develops a BERT-based classifier to reduce pathology report annotation workload.
Improved negation detection in Dutch clinical texts using machine learning.
Deep learning improves cancer report classification accuracy.
Study re-evaluates MIMIC-III codes, finding many are under-coded.
BERT-XML automates ICD coding from EHR notes using BERT pretraining.
Objectives: Most cancer data sources lack information on metastatic recurrence. Electronic medical records (EMRs) and population-based cancer registries contain complementary information on cancer treatment and outcomes, yet are rarely used synergistically. To enable detection of metastatic breast cancer (MBC), we appl…
Early detection and precise characterization of emerging topics in text streams can be highly useful in applications such as timely and targeted public health interventions and discovering evolving regional business trends. Many methods have been proposed for detecting emerging events in text streams using topic modeli…
Study explores how dataset breadth and depth affect Siamese Neural Network performance.
A Pathology report is arguably one of the most important documents in medicine containing interpretive information about the visual findings from the patient's biopsy sample. Each pathology report has a retention period of up to 20 years after the treatment of a patient. Cancer registries process and encode high volume…
Machine learning detects and classifies cognitive distortions in mental health texts.
Machine learning approaches hold great potential for the automated detection of lung nodules in chest radiographs, but training the algorithms requires vary large amounts of manually annotated images, which are difficult to obtain. Weak labels indicating whether a radiograph is likely to contain pulmonary nodules are t…
Extraction of missing attribute values is to find values describing an attribute of interest from a free text input. Most past related work on extraction of missing attribute values work with a closed world assumption with the possible set of values known beforehand, or use dictionaries of values and hand-crafted featu…
Data preprocessing improves data quality for robust data mining.
Big data sets must be carefully partitioned into statistically similar data subsets that can be used as representative samples for big data analysis tasks. In this paper, we propose the random sample partition (RSP) data model to represent a big data set as a set of non-overlapping data subsets, called RSP data blocks,…
A new method for handling imbalanced big data using ensembles and smart data.
Prevents sensitive data generation in diffusion models using labeled and unlabeled data.
Study reveals Data Shapley's inconsistent performance in data selection tasks.
PRRO generates synthetic tabular data that improves SL performance and class distribution.
Defines data science as a natural ecosystem with challenges and missions.
Synthetic data enhances analytics but requires careful volume management.
This paper introduces C-DSL to improve data mining outcomes by considering context.
Proposes using probabilistic models for privacy-preserving synthetic data.
New test ensures quality of shared data in machine learning.
Paper creates fair synthetic data ensuring equal predictions across sensitive attributes.