FAST optimizes additive segmentation for faster, more interpretable models.
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EM-GAN uses GANs for fast stress analysis of multi-segment interconnects.
LatticeNet segments 3D point clouds faster and more efficiently.
We describe a new optimization scheme for finding high-quality correlation clusterings in planar graphs that uses weighted perfect matching as a subroutine. Our method provides lower-bounds on the energy of the optimal correlation clustering that are typically fast to compute and tight in practice. We demonstrate our a…
Novel 3D U-Net method for fast, reproducible white matter tract segmentation.
We consider the problem of learning the inhomogeneous intensity of a counting process, under a sparse segmentation assumption. We introduce a weighted total-variation penalization, using data-driven weights that correctly scale the penalization along the observation interval. We prove that this leads to a sharp tuning …
This survey analyzes deep learning methods for real-time semantic image segmentation.
Improved segmentation model adaptation for new domains.
Learning-based methods for visual segmentation have made progress on particular types of segmentation tasks, but are limited by the necessary supervision, the narrow definitions of fixed tasks, and the lack of control during inference for correcting errors. To remedy the rigidity and annotation burden of standard appro…
Novel framework monitors cardiac image segmentation models in real-time.
Speech, Music and Noise classification/segmentation is an important preprocessing step for audio processing/indexing. To this end, we propose a novel 1D Convolutional Neural Network (CNN) - SwishNet. It is a fast and lightweight architecture that operates on MFCC features which is suitable to be added to the front-end …
In medicine, visualizing chromosomes is important for medical diagnostics, drug development, and biomedical research. Unfortunately, chromosomes often overlap and it is necessary to identify and distinguish between the overlapping chromosomes. A segmentation solution that is fast and automated will enable scaling of co…
Develops a fast BMF approach for binary matrices.
This paper speeds up Gaussian process regression for autocorrelated data.
Joint peak detection is a central problem when comparing samples in genomic data analysis, but current algorithms for this task are unsupervised and limited to at most 2 sample types. We propose PeakSegJoint, a new constrained maximum likelihood segmentation model for any number of sample types. To select the number of…
Recent state-of-the-art image segmentation algorithms are mostly based on deep neural networks, thanks to their high performance and fast computation time. However, these methods are usually trained in a supervised manner, which requires large number of high quality ground-truth segmentation masks. On the other hand, c…
Approximate 3D elastic curves with exact constraints
DVNet efficiently segments large neurovascular datasets using skip connections.
We study the problem of instance segmentation in biological images with crowded and compact cells. We formulate this task as an integer program where variables correspond to cells and constraints enforce that cells do not overlap. To solve this integer program, we propose a column generation formulation where the prici…
Improved graph-based multiclass classification for multilayer data.
A new model reduces noise and speeds up subspace segmentation.
A new heuristic LM algorithm improves -segmentation accuracy with less computation.
A method for MRI brain tumor segmentation using feature vectors and kernel dictionary learning.
Anatomical and biophysical modeling of left atrium (LA) and proximal pulmonary veins (PPVs) is important for clinical management of several cardiac diseases. Magnetic resonance imaging (MRI) allows qualitative assessment of LA and PPVs through visualization. However, there is a strong need for an advanced image segment…
Meta-learning improves image segmentation performance.
A new snake model improves segmentation of SEM images.
Colon Cancer is one of the most common types of cancer. The treatment is planned to depend on the grade or stage of cancer. One of the preconditions for grading of colon cancer is to segment the glandular structures of tissues. Manual segmentation method is very time-consuming, and it leads to life risk for the patient…
A deep learning framework segments deep cerebellar nuclei from 7T MRI, improving accuracy and consistency.
Fast, accurate thalamus segmentation method for MS and ET.
DeepCap automates coronary artery segmentation from IVOCT images.
We present two graph-based algorithms for multiclass segmentation of high-dimensional data. The algorithms use a diffuse interface model based on the Ginzburg-Landau functional, related to total variation compressed sensing and image processing. A multiclass extension is introduced using the Gibbs simplex, with the fun…
Generative model learns from simpler distributions on Lie groups.
Deep neural network models used for medical image segmentation are large because they are trained with high-resolution three-dimensional (3D) images. Graphics processing units (GPUs) are widely used to accelerate the trainings. However, the memory on a GPU is not large enough to train the models. A popular approach to …
Efficient method for training deep learning models with human validation and statistical analysis.
The graph Laplacian is a standard tool in data science, machine learning, and image processing. The corresponding matrix inherits the complex structure of the underlying network and is in certain applications densely populated. This makes computations, in particular matrix-vector products, with the graph Laplacian a ha…
New method speeds up image denoising models without sacrificing performance.
In this paper, we will show an unprecedented method to accelerate training and improve performance, which called random gradient (RG). This method can be easier to the training of any model without extra calculation cost, we use Image classification, Semantic segmentation, and GANs to confirm this method can improve sp…
Enhances FM models for numerical features using function basis encoding.
Detecting and segmenting brain metastases is a tedious and time-consuming task for many radiologists, particularly with the growing use of multi-sequence 3D imaging. This study demonstrates automated detection and segmentation of brain metastases on multi-sequence MRI using a deep learning approach based on a fully con…
Torch-Struct simplifies structured prediction for deep learning.
Training 3D object detectors for autonomous driving has been limited to small datasets due to the effort required to generate annotations. Reducing both task complexity and the amount of task switching done by annotators is key to reducing the effort and time required to generate 3D bounding box annotations. This paper…
We present a simple and fast geometric method for modeling data by a union of affine subspaces. The method begins by forming a collection of local best-fit affine subspaces, i.e., subspaces approximating the data in local neighborhoods. The correct sizes of the local neighborhoods are determined automatically by the Jo…
Study uses deep learning to quickly estimate tissue properties for personalized radio-frequency dosimetry.
Low-rank representation~(LRR) has been a significant method for segmenting data that are generated from a union of subspaces. It is, however, known that solving the LRR program is challenging in terms of time complexity and memory footprint, in that the size of the nuclear norm regularized matrix is -by- (where $…
Segmental structure is a common pattern in many types of sequences such as phrases in human languages. In this paper, we present a probabilistic model for sequences via their segmentations. The probability of a segmented sequence is calculated as the product of the probabilities of all its segments, where each segment …
Bayesian nonparametric method segments multi-sequence time series data.
Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a result of their high accuracy in different segmentation problems. We present a n…
BiPE blends intra-segment and inter-segment encodings for better length extrapolation.