Image reconstruction from undersampled k-space data has been playing an important role for fast MRI. Recently, deep learning has demonstrated tremendous success in various fields and also shown potential to significantly speed up MR reconstruction with reduced measurements. This article gives an overview of deep learni…
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This paper presents a novel method for the reconstruction of a neural network connectivity using calcium fluorescence data. We introduce a fast unsupervised method to integrate different networks that reconstructs structural connectivity from neuron activity. Our method improves the state-of-the-art reconstruction meth…
The augmented Lagrangian (AL) method that solves convex optimization problems with linear constraints has drawn more attention recently in imaging applications due to its decomposable structure for composite cost functions and empirical fast convergence rate under weak conditions. However, for problems such as X-ray co…
In this work we address the problem of real-time dynamic medical MRI and X Ray CT image reconstruction from parsimonious samples Fourier frequency space for MRI and sinogram tomographic projections for CT. Today the de facto standard for such reconstruction is compressed sensing. CS produces high quality images (with m…
New neural network improves MRI reconstruction for non-Cartesian data.
Stochastic image reconstruction is a key part of modern digital rock physics and materials analysis that aims to create numerous representative samples of material micro-structures for upscaling, numerical computation of effective properties and uncertainty quantification. We present a method of three-dimensional stoch…
A new algorithm speeds up EEG source localization using regularization.
A fast method approximates likelihood scores for noisy linear inverse problems.
Generative adversarial networks reconstruct MRI images without full data.
Statistical image reconstruction (SIR) methods are studied extensively for X-ray computed tomography (CT) due to the potential of acquiring CT scans with reduced X-ray dose while maintaining image quality. However, the longer reconstruction time of SIR methods hinders their use in X-ray CT in practice. To accelerate st…
A1GM method improves efficiency in reconstructing missing data using KL divergence.
Faster reconstruction of compressed signals using conditional GAN and NPGD.
Gaussian processes (GPs) with derivatives are useful in many applications, including Bayesian optimization, implicit surface reconstruction, and terrain reconstruction. Fitting a GP to function values and derivatives at points in dimensions requires linear solves and log determinants with an ${n(d+1) \times n(d…
We adopt data structure in the form of cover trees and iteratively apply approximate nearest neighbour (ANN) searches for fast compressed sensing reconstruction of signals living on discrete smooth manifolds. Levering on the recent stability results for the inexact Iterative Projected Gradient (IPG) algorithm and by us…
Improved particle-flow event reconstruction for future colliders using scalable neural networks.
We propose a general framework for reconstructing and denoising single entries of incomplete and noisy entries. We describe: effective algorithms for deciding if and entry can be reconstructed and, if so, for reconstructing and denoising it; and a priori bounds on the error of each entry, individually. In the noiseless…
We present a Bayesian method for feature selection in the presence of grouping information with sparsity on the between- and within group level. Instead of using a stochastic algorithm for parameter inference, we employ expectation propagation, which is a deterministic and fast algorithm. Available methods for feature …
This paper deals with two related problems, namely distance-preserving binary embeddings and quantization for compressed sensing . First, we propose fast methods to replace points from a subset , associated with the Euclidean metric, with points in the cube and we associa…
Fast and accurate MRI image reconstruction from undersampled data is crucial in clinical practice. Deep learning based reconstruction methods have shown promising advances in recent years. However, recovering fine details from undersampled data is still challenging. In this paper, we introduce a novel deep learning bas…
Noise2Filter improves 3D tomography reconstruction efficiency and accuracy.
Compressive sensing is an impressive approach for fast MRI. It aims at reconstructing MR image using only a few under-sampled data in k-space, enhancing the efficiency of the data acquisition. In this study, we propose to learn priors based on undecimated wavelet transform and an iterative image reconstruction algorith…
Obtaining accurate and reliable images from low-dose computed tomography (CT) is challenging. Regression convolutional neural network (CNN) models that are learned from training data are increasingly gaining attention in low-dose CT reconstruction. This paper modifies the architecture of an iterative regression CNN, BC…
Magnetic resonance imaging (MRI) is known to be a slow imaging modality and undersampling in k-space has been used to increase the imaging speed. However, image reconstruction from undersampled k-space data is an ill-posed inverse problem. Iterative algorithms based on compressed sensing have been used to address the i…
Decreasing magnetic resonance (MR) image acquisition times can potentially reduce procedural cost and make MR examinations more accessible. Compressed sensing (CS)-based image reconstruction methods, for example, decrease MR acquisition time by reconstructing high-quality images from data that were originally sampled a…
Auto-encoding is an important task which is typically realized by deep neural networks (DNNs) such as convolutional neural networks (CNN). In this paper, we propose EncoderForest (abbrv. eForest), the first tree ensemble based auto-encoder. We present a procedure for enabling forests to do backward reconstruction by ut…
Neural nets improve plasma equilibrium modeling for NSTX-U.
Cake wavelets minimize orientation score uncertainty.
Probabilistic Autoencoder learns latent space weights' distribution.
CycleQSM uses deep learning to accurately map tissue magnetic susceptibility without needing paired data.
In this work we investigate approaches to reconstruct generator models from measurements available at the generator terminal bus using machine learning (ML) techniques. The goal is to develop an emulator which is trained online and is capable of fast predictive computations. The training is illustrated on synthetic dat…
EnVAE uses energy score for likelihood-free VAEs, improving image reconstructions.
Method reconstructs neuron models from spike times efficiently.
Metalearning optimizes autoencoder dimensions for efficient data representation.
Bayesian optimization speeds up parameter reconstruction in optical nano-metrology.
Deep learning models have significantly improved the visual quality and accuracy on compressive sensing recovery. In this paper, we propose an algorithm for signal reconstruction from compressed measurements with image priors captured by a generative model. We search and constrain on latent variable space to make the m…
We propose denoising dictionary learning (DDL), a simple yet effective technique as a protection measure against adversarial perturbations. We examined denoising dictionary learning on MNIST and CIFAR10 perturbed under two different perturbation techniques, fast gradient sign (FGSM) and jacobian saliency maps (JSMA). W…
New quantum state reconstruction method accelerates convergence.
In this paper, we study the properties of the Frank-Wolfe algorithm to solve the \ExactSparse reconstruction problem. We prove that when the dictionary is quasi-incoherent, at each iteration, the Frank-Wolfe algorithm picks up an atom indexed by the support. We also prove that when the dictionary is quasi-incoherent, t…
Reconstructing transcriptional regulatory networks is an important task in functional genomics. Data obtained from experiments that perturb genes by knockouts or RNA interference contain useful information for addressing this reconstruction problem. However, such data can be limited in size and/or are expensive to acqu…
Aims to create a world model without baggage, achieving good performance.
A fast method for Lasso and Logistic Lasso problems.
In sustained growth with random dynamics stationary distributions can exist without detailed balance. This suggests thermodynamical behavior in fast growing complex systems. In order to model such phenomena we apply both a discrete and a continuous master equation. The derivation of elementary rates from known stationa…
We found hidden convexity in FPCA and developed a faster algorithm.
The field of medical image reconstruction has seen roughly four types of methods. The first type tended to be analytical methods, such as filtered back-projection (FBP) for X-ray computed tomography (CT) and the inverse Fourier transform for magnetic resonance imaging (MRI), based on simple mathematical models for the …
Dictionary learning is the task of determining a data-dependent transform that yields a sparse representation of some observed data. The dictionary learning problem is non-convex, and usually solved via computationally complex iterative algorithms. Furthermore, the resulting transforms obtained generally lack structure…
Bayesian model reconstructs time and frequency data robustly.
We present a generative autoencoder that provides fast encoding, faithful reconstructions (eg. retaining the identity of a face), sharp generated/reconstructed samples in high resolutions, and a well-structured latent space that supports semantic manipulation of the inputs. There are no current autoencoder or GAN model…
This paper improves signal reconstruction using determinantal sampling from random nodes.