We extend an approach of Beliakova for computing knot Floer homology and implement it in a publicly available computer program. We review the main programming and optimization methods used. Our program is then used to check that the Floer homology of a prime non-alternating knot with less than 12 crossings has no torsi…
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48 results for “computer program”
We describe theoretical backgrounds for a computer program that recognizes all closed orientable 3-manifolds up to complexity 8. The program can treat also not necessarily closed 3-manifolds of bigger complexities, but here some unrecognizable (by the program) 3-manifolds may occur.
This paper demonstrates the use of genetic algorithms for evolving: 1) a grandmaster-level evaluation function, and 2) a search mechanism for a chess program, the parameter values of which are initialized randomly. The evaluation function of the program is evolved by learning from databases of (human) grandmaster games…
Money is a technology for promoting economic prosperity. Over history money has become increasingly abstract, it used to be hardware, gold coins and the like, now it is mostly software, data structures located in banks. Here I propose the logical conclusion of the abstraction of money: to use as money the most general …
Develops logic programs for explaining classification model decisions.
problem Creating explanations for decisions made by classification models.
method Answer-set programs for computing counterfactual interventions.
result Maximum responsibility causal explanations can be computed.
Probabilistic programming languages represent complex data with intermingled models in a few lines of code. Efficient inference algorithms in probabilistic programming languages make possible to build unified frameworks to compute interesting probabilities of various large, real-world problems. When the structure of mo…
With the help of a new program, we do computations concerning the Witten-Reshetikhin-Turaev representations of mapping class groups. In particular we distinguish some mutant fibered knots. The program can be downloaded from http://www.geometrie.ch/TQFT
System uses neural networks to prove program equivalence via rewrite rules.
problem Proving equivalence between two dataflow graphs.
method Developed a graph-to-sequence neural network trained on example generation to find semantics-preserving rewrite rules.
result System correctly outputs a rewrite sequence for 96% of program pairs, proving equivalence.
DynamicPPL speeds up probabilistic modeling in Julia.
problem Developing and executing complex dynamic probabilistic models efficiently.
method Modular Julia library with a DSL, tracing data structure, and contextual dispatch.
result Achieves computational performance close to or better than Stan.
Programming has been an important skill for researchers and practitioners in computer science and other related areas. To learn basic programing skills, a long-time systematic training is usually required for beginners. According to a recent market report, the computer software market is expected to continue expanding …
This book is a graduate-level introduction to probabilistic programming. It not only provides a thorough background for anyone wishing to use a probabilistic programming system, but also introduces the techniques needed to design and build these systems. It is aimed at people who have an undergraduate-level understandi…
Tightening Fractional Covering Upper Bounds on the Partition Function for High-Order Region Graphscs.LG
In this paper we present a new approach for tightening upper bounds on the partition function. Our upper bounds are based on fractional covering bounds on the entropy function, and result in a concave program to compute these bounds and a convex program to tighten them. To solve these programs effectively for general r…
Probabilistic inference procedures are usually coded painstakingly from scratch, for each target model and each inference algorithm. We reduce this effort by generating inference procedures from models automatically. We make this code generation modular by decomposing inference algorithms into reusable program-to-progr…
In this paper we demonstrate how genetic algorithms can be used to reverse engineer an evaluation function's parameters for computer chess. Our results show that using an appropriate expert (or mentor), we can evolve a program that is on par with top tournament-playing chess programs, outperforming a two-time World Com…
The crosscap number of a knot is an invariant describing the non-orientable surface of smallest genus that the knot bounds. Unlike knot genus (its orientable counterpart), crosscap numbers are difficult to compute and no general algorithm is known. We present three methods for computing crosscap number that offer varyi…
The idea of computer vision as the Bayesian inverse problem to computer graphics has a long history and an appealing elegance, but it has proved difficult to directly implement. Instead, most vision tasks are approached via complex bottom-up processing pipelines. Here we show that it is possible to write short, simple …
Guaranteed bounds for posterior inference in probabilistic programs.
problem Approximating the posterior distribution of probabilistic programs with provable correctness.
method Interval-based trace semantics, soundness and completeness proofs, weight-aware interval type system.
result Guaranteed bounds on the posterior distribution of probabilistic programs are computed and proven to be correct.
Neural networks powered with external memory simulate computer behaviors. These models, which use the memory to store data for a neural controller, can learn algorithms and other complex tasks. In this paper, we introduce a new memory to store weights for the controller, analogous to the stored-program memory in modern…
Computing Valid p-value for Optimal Changepoint by Selective Inference using Dynamic Programmingstat.ML
Paper introduces a method to assess the statistical reliability of changepoints using selective inference and dynamic programming.
problem Assessing the statistical reliability of detected changepoints.
method Selective inference framework combined with dynamic programming for exact p-value computation.
result Proposes a method with high statistical power and decent computational efficiency.
This paper demonstrates the use of genetic algorithms for evolving a grandmaster-level evaluation function for a chess program. This is achieved by combining supervised and unsupervised learning. In the supervised learning phase the organisms are evolved to mimic the behavior of human grandmasters, and in the unsupervi…
Differentiable programming aids in solving differential equations and their sensitivities.
problem Computing gradients of numerical solutions of differential equations.
method Review of existing techniques and mathematical foundations.
result Established a coherent framework for combining differential equations with data-driven approaches.
Efficiently solves MRF inference problems with semidefinite programming.
problem Computing partition function or MAP estimate in binary and multi-class MRFs.
method Coordinate-descent-based fast semidefinite solver for SDPs.
result Substantially outperforms existing state-of-the-art methods in approximate inference.
SPPL simplifies probabilistic programming for exact inference.
problem Efficient exact inference in probabilistic models.
method SPPL translates probabilistic programs into sum-product expressions, leveraging new techniques for scalability.
result SPPL achieves up to 3500x speedups in exact inference.
Linear time dynamic programming for the exact path of optimal models selected from a finite setcs.LG
New algorithm speeds up path computation for optimal models.
problem Finding the exact path of optimal models from a finite set.
method Dynamic programming approach for linear time computation.
result Dynamic programming achieves linear time for breakpoints computation.
Reinforcement learning has gained wide popularity as a technique for simulation-driven approximate dynamic programming. A less known aspect is that the very reasons that make it effective in dynamic programming can also be leveraged for using it for distributed schemes for certain matrix computations involving non-nega…
Recently proposed models which learn to write computer programs from data use either input/output examples or rich execution traces. Instead, we argue that a novel alternative is to use a glass-box loss function, given as a program itself that can be directly inspected. Glass-box optimization covers a wide range of pro…
Unlike traditional programs (such as operating systems or word processors) which have large amounts of code, machine learning tasks use programs with relatively small amounts of code (written in machine learning libraries), but voluminous amounts of data. Just like developers of traditional programs debug errors in the…
EvoNUDGE uses graph neural networks to improve genetic programming performance.
problem Efficiency in evolutionary computation for problem solving.
method Graph neural network to elicit additional knowledge from symbolic regression problems.
result EvoNUDGE significantly outperforms conventional and neural genetic programming methods.
This study optimizes cycle representatives in persistent homology using linear programming.
problem Non-uniqueness of cycle representatives in persistent homology creates ambiguity.
method Optimization of cycle representatives using linear programming methods.
result Optimization reduces the size of cycle representatives and is effective in most data sets.
Programs compute Heegaard Floer invariants from open books.
problem Computing Heegaard Floer invariants of 3-manifolds.
method SageMath programs that analyze Heegaard diagrams and compute HF-hat.
result Computes Heegaard Floer homology and contact invariants.
Econophysics Through Computationphysics.soc-ph
Econophysics uses computer simulations to study financial markets.
problem Understanding financial market dynamics and behaviors.
method Computer simulations and sample programs.
result Exciting new field of econophysics emerged in 1995.
Random projection (RP) is a classical technique for reducing storage and computational costs. We analyze RP-based approximations of convex programs, in which the original optimization problem is approximated by the solution of a lower-dimensional problem. Such dimensionality reduction is essential in computation-limite…
In this paper we demonstrate how genetic algorithms can be used to reverse engineer an evaluation function's parameters for computer chess. Our results show that using an appropriate mentor, we can evolve a program that is on par with top tournament-playing chess programs, outperforming a two-time World Computer Chess …
New approach uses neural networks to learn program structure and parameters.
problem Learning programs and their structure efficiently.
method Free category prior over programs, end-to-end learning of structure and parameters.
result Neural networks can serve as primitives in probabilistic programs.
The problem of automatic software generation is known as Machine Programming. In this work, we propose a framework based on genetic algorithms to solve this problem. Although genetic algorithms have been used successfully for many problems, one criticism is that hand-crafting its fitness function, the test that aims to…
We present the mathematical background of a software package that computes triangulations of mapping tori of surface homeomorphisms, suitable for Jeff Weeks's program SnapPea. It consists of two programs. jmt computes triangulations and prints them in a human-readable format. jsnap converts this format into SnapPea's t…
A new method for efficient inference in probabilistic programs with mixed support.
problem Challenges in inference for programs with both continuous and discrete latent variables.
method Stochastic gradient Markov Chain Monte Carlo algorithms.
result Outperforms existing composing inference baselines and works almost as well as inference in marginalized versions.
Paper presents an ADMM-based approach to efficiently integrate quadratic programming layers into neural networks.
problem Integrating quadratic programs into neural networks for optimization.
method An ADMM-based network layer architecture for solving quadratic programs efficiently.
result The ADMM layer is approximately an order of magnitude faster than existing methods for medium scaled problems.
Zoetrope Genetic Programming improves symbolic regression performance.
problem Evolutionary symbolic regression for complex mathematical expressions.
method Zoetropic representation, repeated fusion operations, linear combination, crossover, mutation, selection.
result Zoetrope Genetic Programming achieves state-of-the-art performance and low computational time.
Tracr compiles programs into transformer models for interpretability.
problem Uncertainty in understanding transformer model outputs due to unknown learned programs.
method Tracr compiles human-readable programs into known structure transformer models.
result Known structure of Tracr-compiled models serves as ground-truth for interpretability.
Algorithms are described and Maple implementations are provided for finding all quandles of order , as well as computing all homomorphisms between two finite quandles or from a finitely presented quandle (e.g., a knot quandle) to a finite quandle, computing the automorphism group of a finite quandle, etc. Several of…
Probabilistic programming languages (PPLs) are a powerful modeling tool, able to represent any computable probability distribution. Unfortunately, probabilistic program inference is often intractable, and existing PPLs mostly rely on expensive, approximate sampling-based methods. To alleviate this problem, one could tr…
NP-HMC extends HMC for nonparametric models in probabilistic programming.
problem Inference for nonparametric models in probabilistic programming.
method Introduces NP-HMC, a generalization of HMC for nonparametric models using tree representable functions.
result Empirically shows significant performance improvements over existing approaches.
Optimizes train schedules and maintenance using CP and QA.
problem Optimizing train schedules and maintenance considering constraints.
method Used Constraint Programming and Quantum Annealing to model and solve the problem.
result Both CP and QA approaches produce comparable results on real quantum computers.
New method solves constrained stochastic optimization problems efficiently.
problem Online statistical inference of constrained stochastic nonlinear optimization problems.
method Stochastic Sequential Quadratic Programming (StoSQP) with iterative sketching solver.
result The rescaled primal-dual sequence converges to a mean-zero Gaussian distribution.
Bayesian method approximates intractable stochastic programs with chance constraints.
problem Designing systems with stochastic constraints and chance constraints.
method Variational Bayesian approach to approximate posterior predictive integral.
result The solution set converges to the true solution set as the number of observations increases.
A new method speeds up community detection in graphs.
problem Efficiently detecting communities in large graphs.
method Subsampled semidefinite programming for faster clustering.
result Statistical limits of sketching for community detection established.
We present computational results about quasi-alternating knots and links and odd homology obtained by looking at link families in the Conway notation. More precisely, we list quasi-alternating links up to 12 crossings and the first examples of quasi-alternating knots and links with at least two different minimal diagra…