Improved method for unbiased causal discovery in presence of unobserved confounding.
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New RL approach builds short ancestral recombination graphs.
New algorithm groups variables by ancestral relationships to improve causal graph estimation accuracy.
Machine learning models of music typically break up the task of composition into a chronological process, composing a piece of music in a single pass from beginning to end. On the contrary, human composers write music in a nonlinear fashion, scribbling motifs here and there, often revisiting choices previously made. In…
Efficiently searches ancestral graphs using multivariate information.
Ancestral graph models, introduced by Richardson and Spirtes (2002), generalize both Markov random fields and Bayesian networks to a class of graphs with a global Markov property that is closed under conditioning and marginalization. By design, ancestral graphs encode precisely the conditional independence structures t…
New method for ancestral inference in branching processes with random environments.
In this paper, we show that Alexander polynomials for any 2-bridge knots are specializations of cluster variables. A key tool is an ancestral triangle which appeared in both quantum topology and hyperbolic geometry in different ways.
New algorithm identifies causal relationships from graphs, even with selection bias.
Study restricts causal graphs with expert knowledge.
Paper discovers valid IVs from data without domain knowledge.
We consider learning ancestral causal relationships in high dimensions. Our approach is driven by a supervised learning perspective, with discrete indicators of causal relationships treated as labels to be learned from available data. We focus on the setting in which some causal (ancestral) relationships are known (via…
Many biological characteristics of evolutionary interest are not scalar variables but continuous functions. Here we use phylogenetic Gaussian process regression to model the evolution of simulated function-valued traits. Given function-valued data only from the tips of an evolutionary tree and utilising independent pri…
In this paper, we study classes of graphs with three types of edges that capture the modified independence structure of a directed acyclic graph (DAG) after marginalisation over unobserved variables and conditioning on selection variables using the -separation criterion. These include MC, summary, and ancestral grap…
AGFN improves causal discovery by integrating expert feedback and handling latent confounding.
A new algorithm learns MAGs from data more efficiently using entropy.
We introduce a deep, generative autoencoder capable of learning hierarchies of distributed representations from data. Successive deep stochastic hidden layers are equipped with autoregressive connections, which enable the model to be sampled from quickly and exactly via ancestral sampling. We derive an efficient approx…
This paper improves conditional sampling for VAEs by overcoming structural issues.
CCHM algorithm learns BN structure with latent variables, improving causal effect measurement.
The paper develops methods to bound causal effects using Partial Ancestral Graphs.
Generative AI can solve in-context learning problems using a martingale perspective.
Method infers parameters in complex diffusion processes.
We prove that the criterion for Markov equivalence provided by Zhao et al. (2005) may involve a set of features of a graph that is exponential in the number of vertices.
New method discovers causal relationships in confounded systems.
ASCEND discovers causal relationships in multi-omics data by leveraging known hierarchical structure.
New causal models for growing networks avoid node deletion constraints.
One of the major shortcomings of variational autoencoders is the inability to produce generations from the individual modalities of data originating from mixture distributions. This is primarily due to the use of a simple isotropic Gaussian as the prior for the latent code in the ancestral sampling procedure for the da…
Proposes a method to identify causal relationships using background knowledge.
We present the Parallel, Forward-Backward with Pruning (PFBP) algorithm for feature selection (FS) in Big Data settings (high dimensionality and/or sample size). To tackle the challenges of Big Data FS PFBP partitions the data matrix both in terms of rows (samples, training examples) as well as columns (features). By e…
Recent work on mode connectivity in the loss landscape of deep neural networks has demonstrated that the locus of (sub-)optimal weight vectors lies on continuous paths. In this work, we train a neural network that serves as a hypernetwork, mapping a latent vector into high-performance (low-loss) weight vectors, general…
In recent years Variation Autoencoders have become one of the most popular unsupervised learning of complicated distributions.Variational Autoencoder (VAE) provides more efficient reconstructive performance over a traditional autoencoder. Variational auto enocders make better approximaiton than MCMC. The VAE defines a …
Neural Autoregressive Distribution Estimators (NADEs) have recently been shown as successful alternatives for modeling high dimensional multimodal distributions. One issue associated with NADEs is that they rely on a particular order of factorization for . This issue has been recently addressed by a vari…
I-SPEC learns stable models from data without full causal knowledge.
Improved hierarchical discrete VAEs for better stability and performance.
Kernel measures similarity of nonlinear causal structures in heterogeneous populations.
This paper studies the cooperative training of two generative models for image modeling and synthesis. Both models are parametrized by convolutional neural networks (ConvNets). The first model is a deep energy-based model, whose energy function is defined by a bottom-up ConvNet, which maps the observed image to the ene…
We would like to learn latent representations that are low-dimensional and highly interpretable. A model that has these characteristics is the Gaussian Process Latent Variable Model. The benefits and negative of the GP-LVM are complementary to the Variational Autoencoder, the former provides interpretable low-dimension…
New method for causal discovery using peeling algorithms for various data types.
DiffC compresses images by diffusing Gaussian noise, outperforming state-of-the-art methods.
DualVDT improves time-series forecasting with a novel dual reparametrized structure.
Recently, it has been shown that the Jones polynomial, in [LS19], and the Alexander polynomial, in [NT18], of rational knots can be obtained by specializing -polynomials of cluster variables. At the core of both results are continued fractions, which parameterize rational knots and are used to obtain cluster variabl…
A new sampler tackles critical phenomena by leveraging scale invariance.
Forward-backward selection is one of the most basic and commonly-used feature selection algorithms available. It is also general and conceptually applicable to many different types of data. In this paper, we propose a heuristic that significantly improves its running time, while preserving predictive accuracy. The idea…
Paper characterizes and represents pairwise causal background knowledge for improved causal inference.
Algorithm learns Bayesian network structure efficiently from data.
In this paper, we unify the Markov theory of a variety of different types of graphs used in graphical Markov models by introducing the class of loopless mixed graphs, and show that all independence models induced by -separation on such graphs are compositional graphoids. We focus in particular on the subclass of rib…
Novel graphical models for time series with latent confounders improve causal inference.
In this paper we discuss four problems regarding Markov equivalences for subclasses of loopless mixed graphs. We classify these four problems as finding conditions for internal Markov equivalence, which is Markov equivalence within a subclass, for external Markov equivalence, which is Markov equivalence between subclas…