Current Flash X-ray single-particle diffraction Imaging (FXI) experiments, which operate on modern X-ray Free Electron Lasers (XFELs), can record millions of interpretable diffraction patterns from individual biomolecules per day. Due to the stochastic nature of the XFELs, those patterns will to a varying degree includ…
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48 results for “X-ray Diffraction”
Unsupervised Phase Mapping of X-ray Diffraction Data by Nonnegative Matrix Factorization Integrated with Custom Clusteringcond-mat.mtrl-sci
Analyzing large X-ray diffraction (XRD) datasets is a key step in high-throughput mapping of the compositional phase diagrams of combinatorial materials libraries. Optimizing and automating this task can help accelerate the process of discovery of materials with novel and desirable properties. Here, we report a new met…
DRNets combine deep learning and reasoning for complex tasks.
problem Solving complex tasks, especially in scientific discovery, with limited supervision.
method DRNets integrate logic and neural network optimization to encode structured latent spaces constrained by prior knowledge.
result DRNets outperform state-of-the-art models in scientific discovery tasks, recovering more precise crystal structures.
Extracts important peaks from XRD spectra using Attention mechanism.
problem Identifying significant peaks in XRD patterns for material properties.
method Convolutional neural network with Attention mechanism to analyze deep features.
result Selected lattice constant predicts cathodic material cell voltage.
The support recovery problem consists of determining a sparse subset of variables that is relevant in generating a set of observations. In this paper, we study the support recovery problem in the phase retrieval model consisting of noisy phaseless measurements, which arises in a diverse range of settings such as optica…
One of the most powerful approaches to imaging at the nanometer or subnanometer length scale is coherent diffraction imaging using X-ray sources. For amorphous (non-crystalline) samples, the raw data can be interpreted as the modulus of the continuous Fourier transform of the unknown object. Making use of prior informa…
Optical DNNet boosts accuracy with multiple frequency-channels.
problem Improving the accuracy of optical neural networks.
method Developed a novel optical diffractive deep neural network with multiple frequency-channels.
result Multiple frequency-channels significantly increase network accuracy.
We present a novel optimization method, named the Combined Optimization Method (COM), for the joint optimization of two or more cost functions. Unlike the conventional joint optimization schemes, which try to find minima in a weighted sum of cost functions, the COM explores search space for common minima shared by all …
We propose a novel exponentially-modified Gaussian (EMG) mixture residual model. The EMG mixture is well suited to model residuals that are contaminated by a distribution with positive support. This is in contrast to commonly used robust residual models, like the Huber loss or , which assume a symmetric contami…
We establish a link between Fourier optics and a recent construction from the machine learning community termed the kernel mean map. Using the Fraunhofer approximation, it identifies the kernel with the squared Fourier transform of the aperture. This allows us to use results about the invertibility of the kernel mean m…
New method uses image registration to recover complex signals from amplitude data.
problem Recovering complex-valued signals from amplitude measurements.
method Indirect registration using LDDMM formalism with exterior calculus.
result Algorithm performs well under various conditions including noise and topology.
Lin et al. (Reports, 7 September 2018, p. 1004) reported a remarkable proposal that employs a passive, strictly linear optical setup to perform pattern classifications. But interpreting the multilayer diffractive setup as a deep neural network and advocating it as an all-optical deep learning framework are not well jus…
In this paper, we investigate the geometric propagation and diffraction of singularities of solutions to the wave equation on manifolds with edge singularities.
This paper tackles non-convex phase retrieval with structured assumptions.
problem Phase retrieval with limited measurements and structure assumptions.
method Non-convex approaches with sample complexity guarantees.
result Sample-efficient recovery with structured signals/images.
Sharp mapping properties and regularization for X-ray transform on disks of constant curvature.
problem Sharp mapping properties and regularization of X-ray transform.
method Derive functional relations and mapping properties using elliptic differential operators.
result Theoretical possibility of regularized inversions for X-ray transform.
Regularity results for geodesic X-ray transform on nonsmooth manifolds
problem Geodesic X-ray transform on nonsmooth simple manifolds
method Symbol smoothing arguments and pseudodifferential operators with low regularity symbols
result Improved injectivity results for functions
Local X-ray transform works well near boundaries in hyperbolic spaces.
problem Injectivity of X-ray transform near boundaries for hyperbolic metrics.
method Local injectivity proof for geodesic X-ray transform on asymptotically hyperbolic manifolds.
result Local injectivity near a boundary point for X-ray transform in dimensions 3 and higher, up to .
Paper shows invertibility of tensor X-ray transform on certain manifolds.
problem Invertibility of tensor X-ray transform on asymptotically conic manifolds.
method Used 1-cusp pseudodifferential operator algebra and modified solenoidal gauge condition.
result Invertibility of tensor X-ray transform up to natural obstruction.
Study shows stability in X-ray transform on specific hyperbolic manifolds.
problem Stability of X-ray transform on asymptotically hyperbolic manifolds.
method Constructed a parametrix for the normal operator in 0-pseudodifferential calculus.
result Showed a stability estimate for the X-ray transform.
Study X-ray transform on conic spaces, proving injectivity under certain conditions.
problem Injectivity of geodesic X-ray transform on conic metrics.
method Injectivity under non-trapping and no conjugate point assumptions.
result Injectivity of geodesic X-ray transform for asymptotically conic metrics.
Injective X-ray transform on Heisenberg group for regular functions.
problem Injectivity of X-ray transform on sub-Riemannian manifolds.
method Group Fourier Transform and analysis of taming metrics.
result Sufficiently regular functions on Heisenberg group are determined by their line integrals.
Paper proves injectivity of non-abelian X-ray transform on certain spaces.
problem Injectivity of non-abelian X-ray transform on asymptotically hyperbolic spaces.
method Gauge equivalence for unitary connections and skew-Hermitian Higgs fields.
result Injectivity result for non-abelian X-ray transform over skew-Hermitian Higgs fields.
X-ray free-electron lasers (XFELs) are the only sources currently able to produce bright few-fs pulses with tunable photon energies from 100 eV to more than 10 keV. Due to the stochastic SASE operating principles and other technical issues the output pulses are subject to large fluctuations, making it necessary to char…
Confounding variables can degrade generalization performance of radiological deep learning modelscs.CV
Early results in using convolutional neural networks (CNNs) on x-rays to diagnose disease have been promising, but it has not yet been shown that models trained on x-rays from one hospital or one group of hospitals will work equally well at different hospitals. Before these tools are used for computer-aided diagnosis i…
X-rays are commonly performed imaging tests that use small amounts of radiation to produce pictures of the organs, tissues, and bones of the body. X-rays of the chest are used to detect abnormalities or diseases of the airways, blood vessels, bones, heart, and lungs. In this work we present a stochastic attention-based…
Estimating and abstracting the 3D structure of bones using neural networks on X-ray (2D) imagescs.CV
Deep-learning method estimates bone 3D structure from X-ray images.
problem Estimating bone 3D structure from X-ray images.
method Triplet loss-trained neural network selecting closest 3D bone shape from predefined set.
result Average RMS distance of 1.08 mm between predicted and true shapes.
The sub-Riemannian X-ray Transform on H-type groups: Fourier-Slice Theorems and Injectivity setsmath.DG
X-ray transform on H-type groups solved, revealing function injectivity.
problem Injectivity in sub-Riemannian geometry.
method Fourier Slice Theorem adapted to H-type groups.
result Integrable functions on H-type groups are uniquely determined by their integrals over geodesics.
New method eliminates domain size restrictions for X-ray transform inversion.
problem Injectivity and stability of X-ray transform in convex domains.
method Semiclassical analysis to invert X-ray transform without small domain assumptions.
result Elimination of domain size restrictions for injectivity and stability.
Study improves deep learning chest X-ray models by incorporating lateral views.
problem Lack of lateral views in training datasets limits deep learning performance.
method Used PadChest dataset with multiple views to explore merging methods.
result Incorporating lateral views increases model performance for 32 labels.
Study proper sampling for X-ray transforms on simple surfaces.
problem Proper discretizing and sampling issues related to geodesic X-ray transforms on simple surfaces.
method Provide minimal sampling rates for faithful reconstruction, quantify sampling quality, and predict artifacts.
result Minimal sampling rates and artifact prediction for geodesic X-ray transforms on simple surfaces.
Phase retrieval algorithms have become an important component in many modern computational imaging systems. For instance, in the context of ptychography and speckle correlation imaging, they enable imaging past the diffraction limit and through scattering media, respectively. Unfortunately, traditional phase retrieval …
FRODO method rejects out-of-distribution chest x-ray images with high accuracy.
problem Rejecting out-of-distribution samples in medical image analysis.
method Uses feature activations and Mahalanobis distance to measure distribution mismatch.
result Achieves an AUC score of 0.99 in classifying chest x-ray images as in or out of distribution.
Paper solves injectivity of X-ray transform on surfaces.
problem Injectivity of non-Abelian X-ray transform on surfaces.
method Factorization theorem for Loop Groups, energy methods, scalar holomorphic integrating factors.
result Extends results to arbitrary Lie groups.
New proof of injectivity for broken non-abelian X-ray transform in Minkowski space.
problem Injectivity of broken non-abelian X-ray transform in Minkowski space.
method Stability estimate considering gauge, light-sink connections, Bayesian inversion.
result Consistent recovery of light-sink connections from noisy data.
Enhanced X-ray polarimetry with deep learning for better exposure times.
problem Improving sensitivity of X-ray telescopic observations with imaging polarimeters.
method A weighted maximum likelihood combination of predictions from a deep ensemble of ResNet convolutional neural networks trained on Monte Carlo event simulations.
result Improves effective exposure times by ~45% for power-law source spectra.
Four-dimensional scanning transmission electron microscopy (4D-STEM) of local atomic diffraction patterns is emerging as a powerful technique for probing intricate details of atomic structure and atomic electric fields. However, efficient processing and interpretation of large volumes of data remain challenging, especi…
These are lecture notes for the course "Analysis and X-ray tomography". The course is a broad overview of various tools in analysis that can be used to study X-ray tomography. The focus is on tools and ideas, not so much on technical details and minimal assumptions. Only very basic functional analysis is assumed as bac…
Study X-ray transform on manifolds, desingularize, and improve mapping properties.
problem Characterize mapping properties of X-ray transform and its adjoint on manifolds with strictly convex boundary.
method Use b-fibrations, desingularize, and apply Melrose's Pushforward Theorem to analyze polyhomogeneous functions.
result Improved mapping properties of X-ray transform and its adjoint, recovering sharp results.
We show that the existence of a function in with constant geodesic X-ray transform imposes geometrical restrictions on the manifold. The boundary of the manifold has to be umbilical and in the case of a strictly convex Euclidean domain, it must be a ball. Functions with constant geodesic X-ray transform always …
Unique continuation for X-ray transforms of one-forms with partial data.
problem Proving unique continuation for X-ray transforms of one-forms with limited data.
method Proved unique continuation for the normal operator of X-ray transforms of one-forms, leading to partial data results.
result Unique continuation for X-ray transforms of one-forms with partial data.
Guillarmou extends X-ray transform to magnetic and thermostat flows.
problem Stability of magnetic X-ray transforms.
method Generalizes normal operator to thermostat and magnetic flows, proving ellipticity.
result Elliptic pseudodifferential operators of order -1 for generalized normal operators.
New insights into X-ray transform on hyperbolic disk, with functional relations and range characterizations.
problem Understanding the X-ray transform on hyperbolic geometry.
method Derived new singular value decompositions, range characterizations, and intertwining relations with wedge-type differential operators.
result Sharp understanding of boundary behavior and invertibility settings for the X-ray transform.
Novel semi-supervised method for X-ray classification with minimal labels.
problem Classifying X-ray data with limited labeled data.
method Graph-based semi-supervised learning with carefully selected class priors.
result Competitive results on ChestX-ray14 data set with reduced need for annotated data.
Paper shows X-ray transform invertible on certain curved spaces.
problem Invertibility of X-ray transform on curved spaces.
method Introduced new pseudodifferential operator algebra for analysis.
result Stable invertibility near infinity on asymptotically conic manifolds.
Among the plethora of techniques devised to curb the prevalence of noise in medical images, deep learning based approaches have shown the most promise. However, one critical limitation of these deep learning based denoisers is the requirement of high-quality noiseless ground truth images that are difficult to obtain in…
We develop an algorithm that can detect pneumonia from chest X-rays at a level exceeding practicing radiologists. Our algorithm, CheXNet, is a 121-layer convolutional neural network trained on ChestX-ray14, currently the largest publicly available chest X-ray dataset, containing over 100,000 frontal-view X-ray images w…
The geodesic X-ray transform on disks of constant curvature is characterized and decomposed.
problem Characterizing and decomposing the geodesic X-ray transform on disks of constant curvature.
method Explicit construction of a basis for the range and co-kernel, derivation of Singular Value Decomposition.
result Explicit Singular Value Decomposition for the geodesic X-ray transform.
This study evaluates adversarial attacks and defenses for chest X-ray disease classification.
problem Vulnerability of deep neural networks to adversarial examples in chest X-ray disease detection.
method Detailed introduction and evaluation of various attack and defense methods.
result Attack and defense methods perform poorly with excessive iterations and large perturbations.