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A locally-built, LLM-digested index of recent arXiv papers in quant finance, geometry/topology, and statistical ML — keyword search served straight from SQLite on this machine.

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48 results for Virtual Graphs
Graphoidsmath.CO

Graphoids are topological invariants of virtual graph diagrams.

problem Understanding knotted graphs with open ends in proteins and simplifying virtual spatial graphs.
method Topological interpretations of graphoids using graph Reidemeister moves.
result Virtual graphoids are useful for studying knotted graphs and simplifying spatial graphs.

The paper generalizes virtual knot theory using multiple types of virtual crossings.

problem Generalizing virtual knot theory to include multiple types of virtual crossings.
method Starting with graph theory, the paper reviews previous work and then constructs multi-virtual knots and links.
result The multiplicity of virtual crossings allows for a broader application of the Penrose evaluation to all trivalent graphs.

Classical knot theory can be generalized to virtual knot theory and spatial graph theory. In 2007, Fleming and Mellor combined virtual knot theory and spatial graph theory to form, combinatorially, virtual spatial graph theory. In this paper, we introduce a topological definition of virtual spatial graphs that is simil…

2018-06-17abs ↗pdf ↗

Twisted graph diagrams are virtual graph diagrams with bars on edges. A bijection between abstract graph diagrams and twisted graph diagrams is constructed. Then a polynomial invariant of Yamada-type is developed which provides a lower bound for the virtual crossing number of virtual graph diagrams.

2007-06-19abs ↗pdf ↗

Two natural generalizations of knot theory are the study of spatially embedded graphs, and Kauffman's theory of virtual knots. In this paper we combine these approaches to begin the study of virtual spatial graphs.

2005-10-07abs ↗pdf ↗

We introduce a notion of intrinsic linking and knotting for virtual spatial graphs. Our theory gives two filtrations of the set of all graphs, allowing us to measure, in a sense, how intrinsically linked or knotted a graph is; we show that these filtrations are descending and non-terminating. We also provide several ex…

2006-06-09abs ↗pdf ↗

In order to apply quantum topology methods to nonplanar graphs, we define a planar diagram category that describes the local topology of embeddings of graphs into surfaces. These \emph{virtual graphs} are a categorical interpretation of ribbon graphs. We describe an extension of the flow polynomial to virtual graphs, t…

2018-05-01abs ↗pdf ↗

For a signed cyclic graph G, we can construct a unique virtual link L by taking the medial construction and convert 4-valent vertices of the medial graph to crossings according to the signs. If a virtual link can occur in this way then we say that the virtual link is graphical. In the article we shall prove that a virt…

2017-12-18abs ↗pdf ↗

Learning representation for graph classification turns a variable-size graph into a fixed-size vector (or matrix). Such a representation works nicely with algebraic manipulations. Here we introduce a simple method to augment an attributed graph with a virtual node that is bidirectionally connected to all existing nodes…

2017-08-14abs ↗pdf ↗

Virtual knot theory is a generalization (discovered by the author in 1996) of knot theory to the study of all oriented Gauss codes. (Classical knot theory is a study of planar Gauss codes.) Graph theory studies non-planar graphs via graphical diagrams with virtual crossings. Virtual knot theory studies non-planar Gauss…

1998-11-05abs ↗pdf ↗

We introduce an additional structure on ribbon graphs, arrow structure. We extend the Bollobás-Riordan polynomial to ribbon graph with this structure. The extended polynomial satisfies the contraction-deletion relations and naturally behaves with respect to the partial duality of ribbon graphs. We construct an arrow ri…

2011-07-16abs ↗pdf ↗

Two natural generalizations of knot theory are the study of spatial graphs and virtual knots. Our goal is to unify these two approaches into the study of virtual spatial graphs. This paper is a survey, and does not contain any new results. We state the definitions, provide some examples, and survey the known results. W…

2006-08-29abs ↗pdf ↗

The paper classifies virtual knot polynomials and trivalent graph invariants using skein theory.

problem Classifying virtual knot polynomials and trivalent graph invariants with specific conditions.
method Skein-theoretic techniques applied to classify invariants with smallness conditions.
result Classification of all non-trivial invariants of trivalent graphs and skein theories of virtual tangles.

The paper explores representations of graph manifolds to Seifert motion groups.

problem Existence of faithful representations of graph manifolds to Seifert motion groups.
method Discussion and proof of non-existence of certain representations.
result Graph manifolds can have virtually no faithful representations to the Seifert motion group.

We present batch virtual adversarial training (BVAT), a novel regularization method for graph convolutional networks (GCNs). BVAT addresses the shortcoming of GCNs that do not consider the smoothness of the model's output distribution against local perturbations around the input. We propose two algorithms, sample-based…

2019-02-25abs ↗pdf ↗

Let M be a graph manifold. We prove that fundamental groups of embedded incompressible surfaces in M are separable in the fundamental group of M, and that the double cosets for crossing surfaces are also separable. We deduce that if there is a "sufficient" collection of surfaces in M, then the fundamental group of M is…

2011-10-16abs ↗pdf ↗

The paper proves drilled bundles over graphs are virtually special cubulable.

problem Proving drilled bundles over graphs are virtually special cubulable.
method Starting with a Gromov-hyperbolic surface bundle, drilling out essential curves, and using relative hyperbolicity and Wise's theorem.
result Proves drilled bundles over graphs are virtually special cubulable.

The celebrated Thistlethwaite theorem relates the Jones polynomial of a link with the Tutte polynomial of the corresponding planar graph. We give a generalization of this theorem to virtual links. In this case, the graph will be embedded into a (higher genus) surface. For such graphs we use the generalization of the Tu…

2007-04-10abs ↗pdf ↗

Let S be an immersed horizontal surface in a 3-dimensional graph manifold. We show that the fundamental group of the surface S is quadratically distorted whenever the surface is virtually embedded (i.e., separable) and is exponentially distorted when the surface is not virtually embedded.

2017-03-21abs ↗pdf ↗

By generalizing the Kuperberg sl(3) bracket, we construct a graph-valued analogue of the Homflypt sl(3) invariant for virtual knots. The restriction of this invariant for classical knots coincides with the usual Homflypt sl(3) invariant, and for virtual knots and graphs it provides new information that allows one to pr…

2012-07-03abs ↗pdf ↗

We give a technical result that implies a straightforward necessary and sufficient conditions for a graph of groups with virtually cyclic edge groups to be one ended. For arbitrary graphs of groups, we show that if their fundamental group is not one-ended, then we can blow up vertex groups to graphs of groups with simp…

2014-03-25abs ↗pdf ↗

The present paper is an introduction to a combinatorial theory arising as a natural generalisation of classical and virtual knot theory. There is a way to encode links by a class of `realisable' graphs. When passing to generic graphs with the same equivalence relations we get `graph-links'. On one hand graph-links gene…

2008-10-30abs ↗pdf ↗

We consider the following properties of compact oriented irreducible graph-manifolds: to contain a π1π_1-injective surface (immersed, virtually embedded or embedded), be (virtually) fibered over S1S^1, and to carry a metric of nonpositive sectional curvature. It turns out that all these properties can be described from…

2001-12-31abs ↗pdf ↗

Enhances graph neural networks by creating virtual data examples.

problem Lack of examples to identify optimal graph rationales in graph applications.
method Introduces environment replacement to create virtual data examples and proposes a framework for rationale-environment separation and representation learning.
result Demonstrates the effectiveness and efficiency of the augmentation-based graph rationalization framework on molecular and polymer datasets.

The present paper is a review of the current state of Graph-Link Theory (graph-links are also closely related to homotopy classes of looped interlacement graphs), dealing with a generalisation of knots obtained by translating the Reidemeister moves for links into the language of intersection graphs of chord diagrams. I…

2010-01-03abs ↗pdf ↗

Finite stature proven for cube complexes with cyclonormal edges.

problem Understanding the structure of cube complexes with specific edge properties.
method Analyzing the fundamental groups of edge and vertex spaces, showing cyclonormality and virtual specialness.
result The fundamental group of a cube complex has finite stature with respect to vertex groups.

This paper shows that the Seifert volume of each closed non-trivial graph manifold is virtually positive. As a consequence, for each closed orientable prime 3-manifold NN, the set of mapping degrees cD(M,N)cD(M,N) is finite for any 3-manifold MM, unless NN is finitely covered by either a torus bundle, or a trivial circle…

2009-09-18abs ↗pdf ↗

This paper defines a new invariant of virtual knots and links that we call the extended bracket polynomial, and denote by <<K>> for a virtual knot or link K. This invariant is a state summation over bracket states of the oriented diagram for K. Each state is reduced to a virtual 4-regular graph in the plane and the pol…

2007-12-15abs ↗pdf ↗

Let ΓΓ be a connected, triangle-free, planar graph with at least five vertices that has no separating vertices or edges. If the graph ΓΓ is CFS\mathcal{CFS}, we prove that the right-angled Coxeter group GΓG_Γ is virtually a Seifert manifold group or virtually a graph manifold group and we give a complete quasi-isometr…

2017-12-04abs ↗pdf ↗

Inspired by dynamic programming, we propose Stochastic Virtual Gradient Descent (SVGD) algorithm where the Virtual Gradient is defined by computational graph and automatic differentiation. The method is computationally efficient and has little memory requirements. We also analyze the theoretical convergence properties …

2019-07-09abs ↗pdf ↗

Manturov recently introduced the idea of a free knot, i.e. an equivalence class of virtual knots where equivalence is generated by crossing change and virtualization moves. He showed that if a free knot diagram is associated to a graph that is irreducibly odd, then it is minimal with respect to the number of classical …

2010-08-18abs ↗pdf ↗

Study improves reliability of neural models for virtual screening.

problem Reliability issues in neural models for molecular property prediction.
method Investigated model architectures, regularization, and loss functions.
result Correct choice of regularization and inference methods improves reliability.

Bayesian learning improves reliability of molecular predictions for hit compound discovery.

problem Improving reliability of machine learning predictions for virtual screening.
method Bayesian learning algorithms applied to graph neural networks.
result Bayesian learning leads to well-calibrated predictions and higher hit compound success.